HHsearch alignment for GI: 254780567 and conserved domain: PRK06674
>PRK06674 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.26 E-value=3.9e-10 Score=82.23 Aligned_cols=188 Identities=12% Similarity=0.185 Sum_probs=123.8
Q ss_pred CCCCEEECCCHHHHHHHHHHHH-CCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCHH----------HHHHH-------
Q ss_conf 8454165361899999998510-16788-49998787778688999999862762013----------56764-------
Q gi|254780567|r 39 SRDDLLVHSAIEQAVRLIDSWP-SWPSR-VVILVGPSGSGKSCLANIWSDKSRSTRFS----------NIAKS------- 99 (246)
Q Consensus 39 ~~dnFiv~~~N~~A~~~i~~~~-~~~~~-~l~i~G~~GsGKTHLl~a~~~~~~~~~~~----------~~~~~------- 99 (246)
T Consensus 14 ~F~dvv-GQ--~~v~~~L~nai~~~ri~HAyLF~GprGtGKts~Ari~AkaLnC~~~~~~~pC~~C~~C~~i~~g~~~Dv 90 (563)
T PRK06674 14 KFEDVV-GQ--EHVTKTLQNALLQEKVSHAYLFSGPRGTGKTSIAKVFAKAVNCEHAPVAEPCNECPSCLGITNGSISDV 90 (563)
T ss_pred CHHHHC-CH--HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCE
T ss_conf 765524-80--999999999998499650343128998689999999999857999999887766878999855899877
Q ss_pred --H------HHH-------------HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC-EEEEECCCCCCHHHHHHH
Q ss_conf --4------454-------------666666533433210037610335455543112342-156403543200223456
Q gi|254780567|r 100 --L------DSI-------------LIDTRKPVLLEDIDLLDFNDTQLFHIINSIHQYDSS-LLMTARTFPVSWGVCLPD 157 (246)
Q Consensus 100 --~------~~~-------------~~~~~~~i~iddi~~~~~~ee~lf~l~n~~~~~~~~-iilts~~~p~~~~~~l~D 157 (246)
T Consensus 91 iEiDaasn~gVd~IR~i~~~v~~~P~~~~yKV~IIDeah~Lt--~~A~NALLKtLEEPP~~viFILaTtep~k---i~~T 165 (563)
T PRK06674 91 LEIDAASNNGVDEIRDIRDKVKFAPSAVEYKVYIIDEVHMLS--IGAFNALLKTLEEPPGHVIFILATTEPHK---IPPT 165 (563)
T ss_pred EEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECHHHCC--HHHHHHHHHHHHCCCCCEEEEEECCCHHH---CCHH
T ss_conf 985255557879999999982648867873799985456379--99999999986388756499996599475---8478
Q ss_pred HHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 67885212224507889789999999986662897988999999940667989999999999999998477878899999
Q gi|254780567|r 158 LCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRGMGITRSLAAE 237 (246)
Q Consensus 158 L~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ITi~lvk~ 237 (246)
T Consensus 166 I~SRCQ---rf~F~ri~~~~i~~rL~~I~~~E~i~~~~~aL~~Ia~~a~GsmRDAlsiLdQ~~--s~-~~~~i~~~~v~~ 239 (563)
T PRK06674 166 IISRCQ---RFDFRRISVNDIVERLSTVVTNEGTQVEDEALQIIARAADGGMRDALSLLDQAI--SF-SDERVTTEDVLA 239 (563)
T ss_pred HHHHHE---EEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH--HH-CCCCCCHHHHHH
T ss_conf 873310---312788999999999999999849998788999999976997889999999999--71-599768999999
Q ss_pred HHH
Q ss_conf 998
Q gi|254780567|r 238 VLK 240 (246)
Q Consensus 238 vL~ 240 (246)
T Consensus 240 ~lG 242 (563)
T PRK06674 240 VTG 242 (563)
T ss_pred HHC
T ss_conf 868