HHsearch alignment for GI: 254780567 and conserved domain: PRK06871
>PRK06871 DNA polymerase III subunit delta'; Validated.
Probab=97.26 E-value=0.0035 Score=39.46 Aligned_cols=113 Identities=13% Similarity=0.167 Sum_probs=59.2
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCCHH----------H------HHHHH--------HHHHH--------------
Q ss_conf 8849998787778688999999862762013----------5------67644--------45466--------------
Q gi|254780567|r 64 SRVVILVGPSGSGKSCLANIWSDKSRSTRFS----------N------IAKSL--------DSILI-------------- 105 (246)
Q Consensus 64 ~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~----------~------~~~~~--------~~~~~-------------- 105 (246)
T Consensus 23 ~HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~sC~l~~~g~HPD~~~i~~~~~k~I~vd~IR~l~~~~~~~~ 102 (324)
T PRK06871 23 HHALLFKADSGLGTEQLIRALAQWLMCQAPGDEQPCGQCHSCHLFQAGNHPDFHILEPIDGKDIGVDQVREINEKVSQFA 102 (324)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 43787689999789999999999982899999998888989999973899987998467888788999999999986462
Q ss_pred --HHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHH
Q ss_conf --66665334332100376-1033545554311234-2156403543200223456678852122245078897899999
Q gi|254780567|r 106 --DTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDS-SLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKV 181 (246)
Q Consensus 106 --~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~-~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~i 181 (246)
T Consensus 103 ~~g~~KV~iI~~ae~m~~~AaNALLKtL---EEPp~~~~fiL~t~~~~~---ll~TI~SRCq---~~~~~~p~~~~~~~w 173 (324)
T PRK06871 103 QQGGNKVVYIQGAERLTEAAANALLKTL---EEPRPNTYFLLQADLSAS---LLATIYSRCQ---TWLIHVPEEQIALDW 173 (324)
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHHHH---CCCCCCEEEEEEECCCCC---CCCHHHHCCC---CEECCCCCHHHHHHH
T ss_conf 2059669997588885799999999983---389878389998787010---3240862661---200899499999999
Q ss_pred HHHH
Q ss_conf 9998
Q gi|254780567|r 182 IVKM 185 (246)
Q Consensus 182 l~k~ 185 (246)
T Consensus 174 L~~~ 177 (324)
T PRK06871 174 LQAQ 177 (324)
T ss_pred HHHH
T ss_conf 9974