HHsearch alignment for GI: 254780567 and conserved domain: PRK07133
>PRK07133 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.31 E-value=6.5e-11 Score=87.06 Aligned_cols=198 Identities=15% Similarity=0.203 Sum_probs=123.2
Q ss_pred CCCCCCCCCCCCCCCEEECCCHHHHHHHHHHH-HCCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCHHH--------H-
Q ss_conf 15588877668845416536189999999851-016788-499987877786889999998627620135--------6-
Q gi|254780567|r 28 LFFSFPRCLGISRDDLLVHSAIEQAVRLIDSW-PSWPSR-VVILVGPSGSGKSCLANIWSDKSRSTRFSN--------I- 96 (246)
Q Consensus 28 l~l~~~~~~~~~~dnFiv~~~N~~A~~~i~~~-~~~~~~-~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~--------~- 96 (246)
T Consensus 6 ~~L~RKYRPk-~F~EV-IGQ--e~Vv~tL~nAI~~gRIaHAYLF~GPRGvGKTT~ARIfAKaLNC~~~~d~~~pC~~C~~ 81 (718)
T PRK07133 6 KALYRKYRPK-KFDEI-KGQ--DHIIETLKNIIKSGKISHAYLFSGPHGTGKTSVAKIFANALNCSHKTDLIEPCQNCIE 81 (718)
T ss_pred HHHHHHHCCC-CHHHH-CCC--HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 9899872899-75442-285--9999999999974997505862389986889999999999679999999997702143
Q ss_pred --HHHHHH------------------------HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC-CEEEEECCCCC
Q ss_conf --764445------------------------466666653343321003761033545554311234-21564035432
Q gi|254780567|r 97 --AKSLDS------------------------ILIDTRKPVLLEDIDLLDFNDTQLFHIINSIHQYDS-SLLMTARTFPV 149 (246)
Q Consensus 97 --~~~~~~------------------------~~~~~~~~i~iddi~~~~~~ee~lf~l~n~~~~~~~-~iilts~~~p~ 149 (246)
T Consensus 82 ~~~~s~DViEIDAASn~gVDdIReLie~v~y~P~~gkYKVyIIDEvHMLS~--~AfNALLKtLEEPP~hvvFILaTTep~ 159 (718)
T PRK07133 82 NFNNNLDIIEMDAASNNGVDEIRELRENVKNLPQISKYKIYIIDEVHMLSK--SAFNALLKTLEEPPKHVIFILATTDVQ 159 (718)
T ss_pred CCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCH--HHHHHHHHHHCCCCCCCEEEEEECCHH
T ss_conf 047898737754556688899999999825588778724999966200799--999999985027987827999708825
Q ss_pred CHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 00223456678852122245078897899999999866628979889999999406679899999999999999984778
Q gi|254780567|r 150 SWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRGMG 229 (246)
Q Consensus 150 ~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ 229 (246)
T Consensus 160 KI---P~TIlSRCQ---rFdFkrI~~~~I~~~L~~I~~kE~I~~e~eAL~lIA~~a~GSmRDAlSlLDQv---~~f~ng~ 230 (718)
T PRK07133 160 KI---PLTILSRVQ---RFNFRRISEDVIVHQLENILEKEKIKYEKNALKLIASLASGSLRDALSIADQV---SIFGNGN 230 (718)
T ss_pred HC---CHHHHHCCE---EEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH---HHHCCCC
T ss_conf 48---487741220---33588899999999999999985997789999999997688488898799999---9854898
Q ss_pred CCHHHHHHHHH
Q ss_conf 78899999998
Q gi|254780567|r 230 ITRSLAAEVLK 240 (246)
Q Consensus 230 ITi~lvk~vL~ 240 (246)
T Consensus 231 it~k~v~~~~G 241 (718)
T PRK07133 231 ITLKNVNELFG 241 (718)
T ss_pred CCHHHHHHHHC
T ss_conf 72999999967