HHsearch alignment for GI: 254780567 and conserved domain: PRK07261

>PRK07261 topology modulation protein; Provisional.
Probab=96.48  E-value=0.025  Score=34.16  Aligned_cols=112  Identities=16%  Similarity=0.264  Sum_probs=64.7

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----CHHHHHHHHHHHCCCCCEEE
Q ss_conf             99987877786889999998627620135676444546666665334332100376----10335455543112342156
Q gi|254780567|r   67 VILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSLDSILIDTRKPVLLEDIDLLDFN----DTQLFHIINSIHQYDSSLLM  142 (246)
Q Consensus        67 l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iddi~~~~~~----ee~lf~l~n~~~~~~~~iil  142 (246)
T Consensus         3 I~IiG~sGsGKSTlAr~L~~~~~ip~~------------------~LD~l~w~p~w~~~~~~e~~~~~~~~~~~~-~WIi   63 (171)
T PRK07261          3 IAIIGYSGSGKSTLARFLGQHYNCPVL------------------HLDQLHFSSNWQERDDDDMIADISNFLLKQ-DWII   63 (171)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCEE------------------EECCEEECCCCEECCHHHHHHHHHHHHHCC-CEEE
T ss_conf             999889998689999999998797979------------------702278889998888999999999998489-8799


Q ss_pred             EECCCCCCHHHHHHHHHHHH-HHCCEEEECCCCHHHHHHHHHHHHHHCCCC-----------CCHHHHHHHHHC
Q ss_conf             40354320022345667885-212224507889789999999986662897-----------988999999940
Q gi|254780567|r  143 TARTFPVSWGVCLPDLCSRL-KAATVVKISLPDDDFLEKVIVKMFADRQIF-----------IDKKLAAYIVQR  204 (246)
Q Consensus       143 ts~~~p~~~~~~l~DL~SRl-~~g~~~~I~~pdde~~~~il~k~~~~r~i~-----------l~~~v~~yl~~r  204 (246)
T Consensus        64 DGny~~~~~~-------~rl~~aD~iI~Ld~p~~~~l~rvikR~l~~~~~~r~~m~~g~~E~~~~~fl~wi~~~  130 (171)
T PRK07261         64 EGNYSNCLYE-------ERMAEADQIIFLNFSRFNCLYRAFKRYLKYRGKTRPSMAENCPEKFDVEFVKWILLD  130 (171)
T ss_pred             ECCCCCHHHH-------HHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf             4785124777-------679779999998584999999999999998277587657899341029999999734