HHsearch alignment for GI: 254780567 and conserved domain: PRK07270
>PRK07270 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.38 E-value=1.8e-11 Score=90.51 Aligned_cols=189 Identities=16% Similarity=0.216 Sum_probs=124.1
Q ss_pred CCCCEEECCCHHHHHHHHHH-HHCCCCCE-EEEECCCCCCHHHHHHHHHHHHCCCCH----------HHHHH--------
Q ss_conf 84541653618999999985-10167884-999878777868899999986276201----------35676--------
Q gi|254780567|r 39 SRDDLLVHSAIEQAVRLIDS-WPSWPSRV-VILVGPSGSGKSCLANIWSDKSRSTRF----------SNIAK-------- 98 (246)
Q Consensus 39 ~~dnFiv~~~N~~A~~~i~~-~~~~~~~~-l~i~G~~GsGKTHLl~a~~~~~~~~~~----------~~~~~-------- 98 (246)
T Consensus 13 ~F~dvv-GQ--e~i~~~L~nal~~~ri~HAyLF~GP~GtGKts~ArifAkaLnC~~~~~~~pC~~C~~C~~i~~g~~~Dv 89 (557)
T PRK07270 13 TFDEMV-GQ--EVVATTLKQAVESGKISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEPCNNCDICRDITNGSLEDV 89 (557)
T ss_pred CHHHHC-CH--HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCE
T ss_conf 876714-81--999999999998599540442108998689999999999957999899998887779999875899974
Q ss_pred --------H-HHH-----------HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEE-EEECCCCCCHHHHHHH
Q ss_conf --------4-445-----------466666653343321003761033545554311234215-6403543200223456
Q gi|254780567|r 99 --------S-LDS-----------ILIDTRKPVLLEDIDLLDFNDTQLFHIINSIHQYDSSLL-MTARTFPVSWGVCLPD 157 (246)
Q Consensus 99 --------~-~~~-----------~~~~~~~~i~iddi~~~~~~ee~lf~l~n~~~~~~~~ii-lts~~~p~~~~~~l~D 157 (246)
T Consensus 90 iEidaas~~gVd~IRei~~~~~~~P~~~~yKV~IIDEah~Ls~--~A~NALLKtLEEPP~~~vFIL~Ttep~k---Il~T 164 (557)
T PRK07270 90 IEIDAASNNGVDEIRDIRDKSTYAPSRATYKVYIIDEVHMLST--GAFNALLKTLEEPTENVVFILATTELHK---IPAT 164 (557)
T ss_pred EEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCH--HHHHHHHHHHHCCCCCEEEEEEECCHHH---CCHH
T ss_conf 8734777678899999999842387778838999714453499--9999899985289987699998499475---9288
Q ss_pred HHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 67885212224507889789999999986662897988999999940667989999999999999998477878899999
Q gi|254780567|r 158 LCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRGMGITRSLAAE 237 (246)
Q Consensus 158 L~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ITi~lvk~ 237 (246)
T Consensus 165 I~SRCQ---rf~F~~i~~~~i~~~L~~I~~~E~i~~~~~aL~~Ia~~a~G~mRdAlsiLdQ~--~s~~~~~~it~~~v~~ 239 (557)
T PRK07270 165 ILSRVQ---RFEFKSIKTKAIREHLAWILDKEGISFEVEALNLIARRAEGGMRDALSILDQA--LSLSQDNQVTIAIAEE 239 (557)
T ss_pred HHHHHH---HCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH--HHCCCCCCCCHHHHHH
T ss_conf 874300---01088899999999999999983998699999999997799687899999999--9717999767999999
Q ss_pred HHH
Q ss_conf 998
Q gi|254780567|r 238 VLK 240 (246)
Q Consensus 238 vL~ 240 (246)
T Consensus 240 ~~G 242 (557)
T PRK07270 240 ITG 242 (557)
T ss_pred HHC
T ss_conf 968