HHsearch alignment for GI: 254780567 and conserved domain: PRK07399

>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=98.29  E-value=1.1e-05  Score=54.81  Aligned_cols=168  Identities=18%  Similarity=0.227  Sum_probs=96.7

Q ss_pred             CCCEEECCCHHHHHHHHHHHHCC-C-CCEEEEECCCCCCHHHHHHHHHHHHCCC--------------------CHHHHH
Q ss_conf             45416536189999999851016-7-8849998787778688999999862762--------------------013567
Q gi|254780567|r   40 RDDLLVHSAIEQAVRLIDSWPSW-P-SRVVILVGPSGSGKSCLANIWSDKSRST--------------------RFSNIA   97 (246)
Q Consensus        40 ~dnFiv~~~N~~A~~~i~~~~~~-~-~~~l~i~G~~GsGKTHLl~a~~~~~~~~--------------------~~~~~~   97 (246)
T Consensus         3 F~~ii-Gq--~~~~~~L~~ai~~~rl~hAyLF~Gp~G~GK~~~A~~fa~~Ll~~~~~~~~~~~ri~~~nHPDl~~i~P~~   79 (314)
T PRK07399          3 FANLI-GQ--PLAIELLTAAIEQNRIAPAYLFAGPEGVGRKLAALRFIEGLLSQGSPSKNIRRRLEEGNHPDLLWVEPTY   79 (314)
T ss_pred             CCCCC-CC--HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEECCC
T ss_conf             33125-94--9999999999985996744877899983299999999999857899997665587518999778860562


Q ss_pred             --------------------------HHHHH---------HHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCCCEE
Q ss_conf             --------------------------64445---------46666665334332100376-1033545554311234215
Q gi|254780567|r   98 --------------------------KSLDS---------ILIDTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDSSLL  141 (246)
Q Consensus        98 --------------------------~~~~~---------~~~~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~~ii  141 (246)
T Consensus        80 ~~~g~~~~~~~~~~~~~~~~~~~~I~idqIR~l~~~l~~~p~~~~~kVvII~~ae~m~~~AaNaLLKtLEE-P~~~-~fI  157 (314)
T PRK07399         80 QHQGKLITASEAEEAGLKRKSPPQIRLEQIREIKRFLSRPPLEAPRKVVVIEDAETMNEAAANALLKTLEE-PGNG-TLI  157 (314)
T ss_pred             CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCC-CCCC-EEE
T ss_conf             00345455778987653026877787999999999973188568847999889787199999999986147-8785-699


Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             64035432002234566788521222450788978999999998666289798899999994066798999999999999
Q gi|254780567|r  142 MTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDN  221 (246)
Q Consensus       142 lts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~  221 (246)
T Consensus       158 Lit~-~~---~~lLpTI~SRCQ---~i~F~~l~~~~i~~~L~~~~~~~~~~~~~~~l~~~A---~GspG~a~~~~~~~~~  227 (314)
T PRK07399        158 LIAP-SP---ESLLPTIVSRCQ---IIPFYRLSDEQLEQVLKRLGDNINEILDHPELLALA---QGSPGAAIANIEQLQS  227 (314)
T ss_pred             EEEC-CH---HHCCHHHHCCCE---EEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH---CCCHHHHHHHHHHHHH
T ss_conf             9979-93---649146641875---633899899999999997166433102789999881---7997999999999874


Q ss_pred             H
Q ss_conf             9
Q gi|254780567|r  222 L  222 (246)
Q Consensus       222 ~  222 (246)
T Consensus       228 i  228 (314)
T PRK07399        228 I  228 (314)
T ss_pred             C
T ss_conf             8