HHsearch alignment for GI: 254780567 and conserved domain: PRK07471
>PRK07471 DNA polymerase III subunit delta'; Validated.
Probab=98.21 E-value=2e-05 Score=53.30 Aligned_cols=160 Identities=20% Similarity=0.207 Sum_probs=89.3
Q ss_pred EECCCHHHHHHHH-HHHHCCC-CCEEEEECCCCCCHHHHHHHHHHHHCCCC----------HHHHH--------------
Q ss_conf 6536189999999-8510167-88499987877786889999998627620----------13567--------------
Q gi|254780567|r 44 LVHSAIEQAVRLI-DSWPSWP-SRVVILVGPSGSGKSCLANIWSDKSRSTR----------FSNIA-------------- 97 (246)
Q Consensus 44 iv~~~N~~A~~~i-~~~~~~~-~~~l~i~G~~GsGKTHLl~a~~~~~~~~~----------~~~~~-------------- 97 (246)
T Consensus 19 liGqe~--~~~~L~~a~~~grl~HA~Lf~Gp~GiGK~tlA~~~A~~ll~~~~~~~~~~~~~~~~l~~~~~~p~~r~i~~~ 96 (363)
T PRK07471 19 LFGHAA--AEAALLDAYRSGRLHHAWLIGGPQGIGKATLAYRMARFLLATPPPGGDAVFPPPASLAVDPDHPVARRIAAG 96 (363)
T ss_pred CCCHHH--HHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHCC
T ss_conf 168199--999999999859976458767999818899999999998579997777767870531258777289999526
Q ss_pred ------------------------HHHHH---------HHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCC-CEEE
Q ss_conf ------------------------64445---------46666665334332100376-1033545554311234-2156
Q gi|254780567|r 98 ------------------------KSLDS---------ILIDTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDS-SLLM 142 (246)
Q Consensus 98 ------------------------~~~~~---------~~~~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~-~iil 142 (246)
T Consensus 97 ~hpdl~~i~r~~d~k~~~~~~~I~Vd~iR~l~~~~~~~p~~g~~kV~IId~ad~mn~~aaNALLK~L---EEPP~~t~fi 173 (363)
T PRK07471 97 AHGGLLTLERSWNEKGKRLRTVITVDEVRETIGFFGLTAAEGGWRVVIVDTADEMNANAANALLKVL---EEPPARSLLL 173 (363)
T ss_pred CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCHHHHHHHHHHH---CCCCCCEEEE
T ss_conf 9998466762001133321244539999999999724852489669998687873889999999972---1589883899
Q ss_pred EECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 403543200223456678852122245078897899999999866628979889999999406679899999999
Q gi|254780567|r 143 TARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVD 217 (246)
Q Consensus 143 ts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~ 217 (246)
T Consensus 174 Lit~~~~~---llpTI~SRCq---~~~~~~l~~~~~~~~L~~---~~~~~~~~~~~~~la~~a~Gs~~~Al~l~~ 239 (363)
T PRK07471 174 LVSHAPAR---LLPTIRSRCR---KLRLRPLAPEDVIAALAE---AGGPALDDAELAALAALAEGSVGRALRLAG 239 (363)
T ss_pred EEECCHHH---CHHHHHHHCC---CCCCCCCCHHHHHHHHHH---HCCCCCCHHHHHHHHHHCCCCHHHHHHHHC
T ss_conf 86399777---7799997352---425899599999999998---438999989999999975899999998747