HHsearch alignment for GI: 254780567 and conserved domain: PRK07940
>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=97.56 E-value=0.0013 Score=42.06 Aligned_cols=126 Identities=19% Similarity=0.259 Sum_probs=65.8
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCCH---------HHHHH---HHH----------H----------------HHHH
Q ss_conf 84999878777868899999986276201---------35676---444----------5----------------4666
Q gi|254780567|r 65 RVVILVGPSGSGKSCLANIWSDKSRSTRF---------SNIAK---SLD----------S----------------ILID 106 (246)
Q Consensus 65 ~~l~i~G~~GsGKTHLl~a~~~~~~~~~~---------~~~~~---~~~----------~----------------~~~~ 106 (246)
T Consensus 40 HAyLF~Gp~G~Gk~~~A~~~A~~l~C~~~~~~~cg~C~~C~~i~~g~hpDv~~i~p~~~~i~id~iR~l~~~~~~~p~~~ 119 (395)
T PRK07940 40 HAWLFTGPPGSGRSNAARAFAAALQCTDPGVPGCGECRACRTVLAGTHPDVRVVVPEGLSIGVDEVREIVQIAARRPTTG 119 (395)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 03763689987889999999999669999999998787899987689987189826877688999999999985273037
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHH
Q ss_conf 666533433210037610335455543112342-1564035432002234566788521222450788978999999998
Q gi|254780567|r 107 TRKPVLLEDIDLLDFNDTQLFHIINSIHQYDSS-LLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKM 185 (246)
Q Consensus 107 ~~~~i~iddi~~~~~~ee~lf~l~n~~~~~~~~-iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~ 185 (246)
T Consensus 120 ~~kv~ii~~a~~m~--~~a~NalLKtLEEPp~~~~fiL~t~~~~---~llpTI~SRcq---~~~f~~~~~~~i~~~L~~~ 191 (395)
T PRK07940 120 RWRIVVIEDADRLT--ERAANALLKAVEEPPPRTVWLLCAPSVE---DVLPTIRSRCR---HVALRTPSVEAVADVLVRR 191 (395)
T ss_pred CCEEEEEECHHHHC--HHHHHHHHHHHCCCCCCEEEEEEECCHH---HHHHHHHHHHE---ECCCCCCCHHHHHHHHHHC
T ss_conf 95599980778748--9999999985217888869998739978---74468874400---0237999999999999870
Q ss_pred HHHCCCCCCHHHHHHHHH
Q ss_conf 666289798899999994
Q gi|254780567|r 186 FADRQIFIDKKLAAYIVQ 203 (246)
Q Consensus 186 ~~~r~i~l~~~v~~yl~~ 203 (246)
T Consensus 192 -----~gi~~~~A~~aA~ 204 (395)
T PRK07940 192 -----DGVDPETAQWAAR 204 (395)
T ss_pred -----CCCCHHHHHHHHH
T ss_conf -----1999899999999