HHsearch alignment for GI: 254780567 and conserved domain: PRK07940

>PRK07940 DNA polymerase III subunit delta'; Validated.
Probab=97.56  E-value=0.0013  Score=42.06  Aligned_cols=126  Identities=19%  Similarity=0.259  Sum_probs=65.8

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCCH---------HHHHH---HHH----------H----------------HHHH
Q ss_conf             84999878777868899999986276201---------35676---444----------5----------------4666
Q gi|254780567|r   65 RVVILVGPSGSGKSCLANIWSDKSRSTRF---------SNIAK---SLD----------S----------------ILID  106 (246)
Q Consensus        65 ~~l~i~G~~GsGKTHLl~a~~~~~~~~~~---------~~~~~---~~~----------~----------------~~~~  106 (246)
T Consensus        40 HAyLF~Gp~G~Gk~~~A~~~A~~l~C~~~~~~~cg~C~~C~~i~~g~hpDv~~i~p~~~~i~id~iR~l~~~~~~~p~~~  119 (395)
T PRK07940         40 HAWLFTGPPGSGRSNAARAFAAALQCTDPGVPGCGECRACRTVLAGTHPDVRVVVPEGLSIGVDEVREIVQIAARRPTTG  119 (395)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf             03763689987889999999999669999999998787899987689987189826877688999999999985273037


Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHH
Q ss_conf             666533433210037610335455543112342-1564035432002234566788521222450788978999999998
Q gi|254780567|r  107 TRKPVLLEDIDLLDFNDTQLFHIINSIHQYDSS-LLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKM  185 (246)
Q Consensus       107 ~~~~i~iddi~~~~~~ee~lf~l~n~~~~~~~~-iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~  185 (246)
T Consensus       120 ~~kv~ii~~a~~m~--~~a~NalLKtLEEPp~~~~fiL~t~~~~---~llpTI~SRcq---~~~f~~~~~~~i~~~L~~~  191 (395)
T PRK07940        120 RWRIVVIEDADRLT--ERAANALLKAVEEPPPRTVWLLCAPSVE---DVLPTIRSRCR---HVALRTPSVEAVADVLVRR  191 (395)
T ss_pred             CCEEEEEECHHHHC--HHHHHHHHHHHCCCCCCEEEEEEECCHH---HHHHHHHHHHE---ECCCCCCCHHHHHHHHHHC
T ss_conf             95599980778748--9999999985217888869998739978---74468874400---0237999999999999870


Q ss_pred             HHHCCCCCCHHHHHHHHH
Q ss_conf             666289798899999994
Q gi|254780567|r  186 FADRQIFIDKKLAAYIVQ  203 (246)
Q Consensus       186 ~~~r~i~l~~~v~~yl~~  203 (246)
T Consensus       192 -----~gi~~~~A~~aA~  204 (395)
T PRK07940        192 -----DGVDPETAQWAAR  204 (395)
T ss_pred             -----CCCCHHHHHHHHH
T ss_conf             -----1999899999999