HHsearch alignment for GI: 254780567 and conserved domain: PRK07952
>PRK07952 DNA replication protein DnaC; Validated.
Probab=99.43 E-value=2.7e-13 Score=101.69 Aligned_cols=142 Identities=11% Similarity=0.085 Sum_probs=94.8
Q ss_pred CCCC---CCCCCCEEECCCHHH-HHH----HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCC----CC-HHHHHH-
Q ss_conf 8776---688454165361899-999----998510167884999878777868899999986276----20-135676-
Q gi|254780567|r 33 PRCL---GISRDDLLVHSAIEQ-AVR----LIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKSRS----TR-FSNIAK- 98 (246)
Q Consensus 33 ~~~~---~~~~dnFiv~~~N~~-A~~----~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~~----~~-~~~~~~- 98 (246)
T Consensus 58 gI~~~~~~~~Feny~~~~~~q~~al~~a~~y~enf~~-~~~gLlF~G~~GTGKThLA~aIan~Li~~G~sVlf~t~~dLl 136 (242)
T PRK07952 58 GIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDG-NIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIM 136 (242)
T ss_pred CCCHHHHCCEEECEECCCHHHHHHHHHHHHHHHHHCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHH
T ss_conf 9985772884212015877789999999999986543-887179978999978999999999999879949997799999
Q ss_pred --------H---HH---HHHHHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH-HHHHH
Q ss_conf --------4---44---546666665334332100376---103354555431123421564035432002234-56678
Q gi|254780567|r 99 --------S---LD---SILIDTRKPVLLEDIDLLDFN---DTQLFHIINSIHQYDSSLLMTARTFPVSWGVCL-PDLCS 160 (246)
Q Consensus 99 --------~---~~---~~~~~~~~~i~iddi~~~~~~---ee~lf~l~n~~~~~~~~iilts~~~p~~~~~~l-~DL~S 160 (246)
T Consensus 137 ~~lr~t~~~~~~~e~~~l~~l~~~dLLIiDdlG~e~~t~~~~~~lf~iId~Ry~~~kp~IitTNl~~~eL~~~lGeR~~d 216 (242)
T PRK07952 137 SAMKDTFRNSETSEEQLLNDLSNVDLLVIDEIGVQTESRYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVMD 216 (242)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 99999980687569999998631898987301466588889999999999999716988998179999999997089999
Q ss_pred HHH--HCCEEEECCCCH
Q ss_conf 852--122245078897
Q gi|254780567|r 161 RLK--AATVVKISLPDD 175 (246)
Q Consensus 161 Rl~--~g~~~~I~~pdd 175 (246)
T Consensus 217 Rl~~~~~~~l~f~w~Sy 233 (242)
T PRK07952 217 RMRLGNSLWVIFNWDSY 233 (242)
T ss_pred HHHHCCCEEEEECCCCC
T ss_conf 99727985996067050