HHsearch alignment for GI: 254780567 and conserved domain: PRK07993
>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=96.67 E-value=0.021 Score=34.71 Aligned_cols=111 Identities=18% Similarity=0.218 Sum_probs=58.5
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCC----------HHHHHH---HHH------------HHHHH-------------
Q ss_conf 8499987877786889999998627620----------135676---444------------54666-------------
Q gi|254780567|r 65 RVVILVGPSGSGKSCLANIWSDKSRSTR----------FSNIAK---SLD------------SILID------------- 106 (246)
Q Consensus 65 ~~l~i~G~~GsGKTHLl~a~~~~~~~~~----------~~~~~~---~~~------------~~~~~------------- 106 (246)
T Consensus 25 HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~~C~l~~~~~HPD~~~i~pe~~~~~I~IdqIR~l~~~~~~~~ 104 (334)
T PRK07993 25 HALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLTPEKGKSSLGVDAVREVTEKLYEHA 104 (334)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 46754799998899999999999818999999999999789998668999847753422345599999999999984366
Q ss_pred ---HHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHH
Q ss_conf ---6665334332100376-103354555431123--4215640354320022345667885212224507889789999
Q gi|254780567|r 107 ---TRKPVLLEDIDLLDFN-DTQLFHIINSIHQYD--SSLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEK 180 (246)
Q Consensus 107 ---~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~--~~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~ 180 (246)
T Consensus 105 ~~g~~kV~iI~~Ae~mn~~AaNaLLKtL---EEPp~~t~~iL~t~-~~~~---lLpTI~SRCq---~~~~~~~~~~~~~~ 174 (334)
T PRK07993 105 RLGGAKVVWLPDAALLTDAAANALLKTL---EEPPEKTWFFLACR-EPAR---LLATLRSRCR---LHYLAPPPEQYALT 174 (334)
T ss_pred CCCCCEEEEECCHHHHCHHHHHHHHHHH---CCCCCCEEEEEECC-CHHH---CCCHHHHHCC---CCCCCCCCHHHHHH
T ss_conf 5699479997667775999999999861---27998849998669-8565---7238875230---41589979999999
Q ss_pred HHHHH
Q ss_conf 99998
Q gi|254780567|r 181 VIVKM 185 (246)
Q Consensus 181 il~k~ 185 (246)
T Consensus 175 wL~~~ 179 (334)
T PRK07993 175 WLSRE 179 (334)
T ss_pred HHHHH
T ss_conf 99873