HHsearch alignment for GI: 254780567 and conserved domain: PRK08084

Probab=100.00  E-value=0  Score=382.06  Aligned_cols=220  Identities=17%  Similarity=0.180  Sum_probs=197.8

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-----CHHH
Q ss_conf             34810341558887766884541653618999999985101678849998787778688999999862762-----0135
Q gi|254780567|r   21 PKNKEEQLFFSFPRCLGISRDDLLVHSAIEQAVRLIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKSRST-----RFSN   95 (246)
Q Consensus        21 ~~~~~~Ql~l~~~~~~~~~~dnFiv~~~N~~A~~~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~~~-----~~~~   95 (246)
T Consensus         2 ~~n~P~QL~L~~~l~~~~tfdnFi~g~n~~~~~al~~~~~~~~~~~l~l~G~~G~GKTHLLqA~~~~~~~~~~~~~yl~~   81 (235)
T PRK08084          2 SLNTPAQLSLPLYLPDDETFASFYPGDNDSLLAALQNVLRQEHSGYIYLWGREGAGRSHLLHAACAELSQRGDAVGYVPL   81 (235)
T ss_pred             CCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEH
T ss_conf             98995520258999997663023448869999999999857898769998999988899999999999707985799877


Q ss_pred             HH-HHH---HHHHHHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHHHHHHHHHHHCCE
Q ss_conf             67-644---4546666665334332100376---1033545554311234-21564035432002234566788521222
Q gi|254780567|r   96 IA-KSL---DSILIDTRKPVLLEDIDLLDFN---DTQLFHIINSIHQYDS-SLLMTARTFPVSWGVCLPDLCSRLKAATV  167 (246)
Q Consensus        96 ~~-~~~---~~~~~~~~~~i~iddi~~~~~~---ee~lf~l~n~~~~~~~-~iilts~~~p~~~~~~l~DL~SRl~~g~~  167 (246)
T Consensus        82 ~~~~~~~~~~l~~l~~~dll~iDDi~~i~g~~~~ee~lF~l~N~~~~~g~~~ll~ts~~~P~~l~~~l~DL~SRl~~g~~  161 (235)
T PRK08084         82 DKRAWFVPEVLEGMEQLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQI  161 (235)
T ss_pred             HHHHHHHHHHHHHHHHCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCHHHHHHHHCCCE
T ss_conf             98665179999876418989982745546997899999999999998489669996798824302312889999956972


Q ss_pred             EEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             4507889789999999986662897988999999940667989999999999999998477878899999998
Q gi|254780567|r  168 VKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRGMGITRSLAAEVLK  240 (246)
Q Consensus       168 ~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ITi~lvk~vL~  240 (246)
T Consensus       162 ~~i~~~dde~~~~iL~~~a~~rgl~l~~~V~~yl~~~~~R~~~~L~~~l~~Ld~~Sl~~kr~iTip~vkevL~  234 (235)
T PRK08084        162 YKLQPLSDEEKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDKASITAQRKLTIPFVKEILK  234 (235)
T ss_pred             EEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
T ss_conf             7855999899999999999973999998999999986158899999999999999998199999999999965