HHsearch alignment for GI: 254780567 and conserved domain: PRK09111
>PRK09111 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.02 E-value=1.4e-08 Score=72.62 Aligned_cols=195 Identities=15% Similarity=0.151 Sum_probs=125.1
Q ss_pred CCCCCCCCCCCEEECCCHHHHHHHHHH-HHCC-CCCEEEEECCCCCCHHHHHHHHHHHHCCCCHH---------------
Q ss_conf 887766884541653618999999985-1016-78849998787778688999999862762013---------------
Q gi|254780567|r 32 FPRCLGISRDDLLVHSAIEQAVRLIDS-WPSW-PSRVVILVGPSGSGKSCLANIWSDKSRSTRFS--------------- 94 (246)
Q Consensus 32 ~~~~~~~~~dnFiv~~~N~~A~~~i~~-~~~~-~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~--------------- 94 (246)
T Consensus 15 ~k~rp~-~f~~~~-gq--~~~~~~l~~~~~~~~~~~a~l~~g~rg~gktt~ari~a~~lnc~~~~~~~~~~~~~c~~c~~ 90 (600)
T PRK09111 15 RKYRPQ-TFDDLI-GQ--EAMVRTLRNAFETGRIAQAFMLTGVRGVGKTTTARILARALNYKGPDGVGGPTIDPCGVGEH 90 (600)
T ss_pred ECCCCC-CHHHHC-CC--HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
T ss_conf 101798-776633-85--99999999999729842047645789878999999999996698876668998898998865
Q ss_pred HHHHH---------------HHH----H---------HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC-EEEEEC
Q ss_conf 56764---------------445----4---------666666533433210037610335455543112342-156403
Q gi|254780567|r 95 NIAKS---------------LDS----I---------LIDTRKPVLLEDIDLLDFNDTQLFHIINSIHQYDSS-LLMTAR 145 (246)
Q Consensus 95 ~~~~~---------------~~~----~---------~~~~~~~i~iddi~~~~~~ee~lf~l~n~~~~~~~~-iilts~ 145 (246)
T Consensus 91 c~~i~~~~~~d~~e~daas~~~v~~~r~~~~~~~~~p~~~~~kv~iidevhmls~--~afnallktleepp~~~~fi~at 168 (600)
T PRK09111 91 CQAIMEGRHVDVIEMDAASHTGVDDIREIIESVRYRPVSARYKVYIIDEVHMLST--AAFNALLKTLEEPPPHVKFIFAT 168 (600)
T ss_pred HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCH--HHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 8988668998758851554578889999998605388777546999600110579--99999998762598654999962
Q ss_pred CCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 54320022345667885212224507889789999999986662897988999999940667989999999999999998
Q gi|254780567|r 146 TFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALS 225 (246)
Q Consensus 146 ~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~ 225 (246)
T Consensus 169 t~~~k~p---~ti~src~---~f~~~~~~~~~~~~~l~~i~~~e~~~~~~~al~~ia~~a~GS~RDaLSlLDQa--i~~- 239 (600)
T PRK09111 169 TEIRKVP---VTVLSRCQ---RFDLRRIEAEVLAAHLARIAEKEGVEVEPDALALIARAAEGSVRDGLSLLDQA--IAH- 239 (600)
T ss_pred CCHHHCC---HHHHHHHH---EECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH--HHC-
T ss_conf 8534375---89985441---20105799999999999999860768667799999997489842189999999--972-
Q ss_pred HCCCCCHHHHHHHHHH
Q ss_conf 4778788999999986
Q gi|254780567|r 226 RGMGITRSLAAEVLKE 241 (246)
Q Consensus 226 ~kr~ITi~lvk~vL~~ 241 (246)
T Consensus 240 ~~~~i~~~~v~~mLGl 255 (600)
T PRK09111 240 GAGEVTAEQVRDMLGL 255 (600)
T ss_pred CCCCCCHHHHHHHHCC
T ss_conf 7987569999998688