HHsearch alignment for GI: 254780567 and conserved domain: PRK11034

Probab=98.28  E-value=6.8e-06  Score=56.13  Aligned_cols=142  Identities=15%  Similarity=0.253  Sum_probs=79.6

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCCCCHH--HHHH------------------------HHHHHHHHHHHHHHHHHH
Q ss_conf             78849998787778688999999862762013--5676------------------------444546666665334332
Q gi|254780567|r   63 PSRVVILVGPSGSGKSCLANIWSDKSRSTRFS--NIAK------------------------SLDSILIDTRKPVLLEDI  116 (246)
Q Consensus        63 ~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~--~~~~------------------------~~~~~~~~~~~~i~iddi  116 (246)
T Consensus       487 PigsFlf~GPTGVGKTElak~LA~~L~~~lir~DMSEy~e~hsvsrLiGaPPGYVGy~eGG~Lte~Vr~~PysVvL~DEI  566 (758)
T PRK11034        487 PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI  566 (758)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEHHH
T ss_conf             70589997899877799999999998667721426653120147774489986667677770128787398779973367


Q ss_pred             HCCCCCC-HHHHHHHHHHH----------CCCCCEEEEECCCCCCH---------------------HHHHHHHHHHHHH
Q ss_conf             1003761-03354555431----------12342156403543200---------------------2234566788521
Q gi|254780567|r  117 DLLDFND-TQLFHIINSIH----------QYDSSLLMTARTFPVSW---------------------GVCLPDLCSRLKA  164 (246)
Q Consensus       117 ~~~~~~e-e~lf~l~n~~~----------~~~~~iilts~~~p~~~---------------------~~~l~DL~SRl~~  164 (246)
T Consensus       567 EKAhpdV~nilLQvlD~G~LtD~~Gr~vdF~NtiIImTSN~Ga~~~~~~~~gf~~~~~~~~~~~~l~~~F~PEFlNRiD~  646 (758)
T PRK11034        567 EKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDN  646 (758)
T ss_pred             HHHCHHHHHHHHHHCCCCCCCCCCCCEEECEEEEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCE
T ss_conf             56398999988732377830179999884400199982561748786421475542035999999995479867723674


Q ss_pred             CCEEEECCCCHHHHHHHHHHH-------HHHCCCC--CCHHHHHHHHHCCC
Q ss_conf             222450788978999999998-------6662897--98899999994066
Q gi|254780567|r  165 ATVVKISLPDDDFLEKVIVKM-------FADRQIF--IDKKLAAYIVQRME  206 (246)
Q Consensus       165 g~~~~I~~pdde~~~~il~k~-------~~~r~i~--l~~~v~~yl~~r~~  206 (246)
T Consensus       647 --ii~F~~L~~~~l~~Iv~~~l~~l~~rL~~~~i~l~~~~~a~~~l~~~gy  695 (758)
T PRK11034        647 --IIWFDHLSTDVIHQVVDKFIVELQAQLDQKGVSLEVSQEARDWLAEKGY  695 (758)
T ss_pred             --EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCC
T ss_conf             --7863889999999999999999999999789859988999999998488