HHsearch alignment for GI: 254780567 and conserved domain: TIGR02881

>TIGR02881 spore_V_K stage V sporulation protein K; InterPro: IPR014232 Proteins in this entry include the stage V sporulation protein K (SpoVK), a close homologue of the Rubisco expression protein CbbX (IPR000470 from INTERPRO), and are members of an ATPase family associated with various cellular activities. These proteins are strictly limited to bacterial endospore-forming species, but are not found universally among members of this group; they are missing from the Clostridium species..
Probab=98.14  E-value=0.0001  Score=48.84  Aligned_cols=164  Identities=13%  Similarity=0.274  Sum_probs=106.6

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCC-------------------CCHHHHHHHHHHHHHHHH-HHHHHHHHHCC------C
Q ss_conf             999878777868899999986276-------------------201356764445466666-65334332100------3
Q gi|254780567|r   67 VILVGPSGSGKSCLANIWSDKSRS-------------------TRFSNIAKSLDSILIDTR-KPVLLEDIDLL------D  120 (246)
Q Consensus        67 l~i~G~~GsGKTHLl~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~-~~i~iddi~~~------~  120 (246)
T Consensus        45 MiFKGNPGTGKTTVAR~~gklf~emnvL~KGH~iE~ERADLVGEYIGHTAqkTRe~~kkA~GGvLFiDEAYSLaRGGEKD  124 (261)
T TIGR02881        45 MIFKGNPGTGKTTVARLLGKLFKEMNVLSKGHLIEVERADLVGEYIGHTAQKTREVIKKALGGVLFIDEAYSLARGGEKD  124 (261)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
T ss_conf             77427866843899999999985337567886788762221223203004899999998638800557777761488887


Q ss_pred             CCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH---HHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf             76103354555431123421564035432002234---566788521222450788978999999998666289798899
Q gi|254780567|r  121 FNDTQLFHIINSIHQYDSSLLMTARTFPVSWGVCL---PDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKL  197 (246)
Q Consensus       121 ~~ee~lf~l~n~~~~~~~~iilts~~~p~~~~~~l---~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v  197 (246)
T Consensus       125 FGKEAIDtLVK~mEd~~~~lvlILAGY~~EM~yFL~~NPGL~SRFP--i~i~FPdY~~eeL~~Ia~~m~~~ReY~Lt~~A  202 (261)
T TIGR02881       125 FGKEAIDTLVKAMEDQRNELVLILAGYSDEMDYFLSLNPGLRSRFP--ISIDFPDYTVEELMEIAERMVKEREYKLTEEA  202 (261)
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCC--CEEECCCCCHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf             6620888999987615698689970876899998620779777665--05418899888999999999864642257889


Q ss_pred             HHHHHHCCC----------CCHHHHHHHHHH-H--HHHHHHHCCCCCH
Q ss_conf             999994066----------798999999999-9--9999984778788
Q gi|254780567|r  198 AAYIVQRME----------RSLVFAEKLVDK-M--DNLALSRGMGITR  232 (246)
Q Consensus       198 ~~yl~~r~~----------Rs~~~l~~~l~~-L--d~~sl~~kr~ITi  232 (246)
T Consensus       203 ~~~lr~~l~~~~~~~~~~~sNaR~vRN~iE~AIR~QAvRlL~~~~~~k  250 (261)
T TIGR02881       203 KWKLREHLAKVDQLSSREFSNARYVRNIIEKAIRRQAVRLLKKSDYSK  250 (261)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf             999999974124442100576201242889999999987643464358