HHsearch alignment for GI: 254780567 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=98.46 E-value=1.1e-05 Score=54.98 Aligned_cols=203 Identities=15% Similarity=0.155 Sum_probs=120.6
Q ss_pred CCCCCCC-CEEECCCHH---HHHHHHHHHH-CCCCCEEEEECCCCCCHHHHHHHHHHHH----C---C-----CCHHHH-
Q ss_conf 7668845-416536189---9999998510-1678849998787778688999999862----7---6-----201356-
Q gi|254780567|r 35 CLGISRD-DLLVHSAIE---QAVRLIDSWP-SWPSRVVILVGPSGSGKSCLANIWSDKS----R---S-----TRFSNI- 96 (246)
Q Consensus 35 ~~~~~~d-nFiv~~~N~---~A~~~i~~~~-~~~~~~l~i~G~~GsGKTHLl~a~~~~~----~---~-----~~~~~~- 96 (246)
T Consensus 9 ~~dY~Pden~i~hRdeqI~~l~~~L~~~l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~NC~~ 88 (383)
T TIGR02928 9 EPDYVPDENRIVHRDEQIEELAKALRPILRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYINCQI 88 (383)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
T ss_conf 75770274246686789999999988750674898725887888987889999999999998622699715899977854
Q ss_pred -----------HHHH----------------H------HHHHH-HH---HHHHHHHHHCC--CCCCH-----HHHHHHHH
Q ss_conf -----------7644----------------4------54666-66---65334332100--37610-----33545554
Q gi|254780567|r 97 -----------AKSL----------------D------SILID-TR---KPVLLEDIDLL--DFNDT-----QLFHIINS 132 (246)
Q Consensus 97 -----------~~~~----------------~------~~~~~-~~---~~i~iddi~~~--~~~ee-----~lf~l~n~ 132 (246)
T Consensus 89 ~~T~y~~~~~L~~~ln~~~~~~~vP~tG~s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~Lv~~~~d~PAyS~~LY~L~-R 167 (383)
T TIGR02928 89 LDTSYQVLVELANQLNRRGSGEEVPTTGLSTSEVFRELYKELNRERGDSLIIVLDEIDKLVRKDDDDPAYSKLLYQLS-R 167 (383)
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCHHHHHHHHHHH-H
T ss_conf 684699999999985157788889887787899999999998320188799986231022158888807878853433-1
Q ss_pred HHC----CCCCEEEEE-CCCCCCHHHHHHHHHHHHHHCCE---EEECCCCHHHHHHHHHHHH-HH--CCCCCCHHHHHHH
Q ss_conf 311----234215640-35432002234566788521222---4507889789999999986-66--2897988999999
Q gi|254780567|r 133 IHQ----YDSSLLMTA-RTFPVSWGVCLPDLCSRLKAATV---VKISLPDDDFLEKVIVKMF-AD--RQIFIDKKLAAYI 201 (246)
Q Consensus 133 ~~~----~~~~iilts-~~~p~~~~~~l~DL~SRl~~g~~---~~I~~pdde~~~~il~k~~-~~--r~i~l~~~v~~yl 201 (246)
T Consensus 168 a~~~~~~~~~~vgvIgISND~~f~----~~Ld~RVkSsL~~eei~FpPYdA~eL~~IL~~R~v~~AF~dGvl~d~VI~lc 243 (383)
T TIGR02928 168 ARENGDLENAKVGVIGISNDLKFR----ENLDPRVKSSLCEEEIVFPPYDAEELRDILENRAVEKAFYDGVLDDGVIPLC 243 (383)
T ss_pred HHHCCCCCCCCEEEEEEECCCHHH----HHCCCCEECCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 000357788534899986571436----4457530132487400407988699999997203120336885462279999
Q ss_pred HHCCCCCHHHHHHHHHHHHH---HHHHHC-CCCCHHHHHHHHHHH
Q ss_conf 94066798999999999999---999847-787889999999867
Q gi|254780567|r 202 VQRMERSLVFAEKLVDKMDN---LALSRG-MGITRSLAAEVLKET 242 (246)
Q Consensus 202 ~~r~~Rs~~~l~~~l~~Ld~---~sl~~k-r~ITi~lvk~vL~~~ 242 (246)
T Consensus 244 AA~aAq~hGDAR~AiDLLR~AGe~A~~~g~~~Vt~~HV~~A~e~~ 288 (383)
T TIGR02928 244 AALAAQEHGDARKAIDLLRVAGEIAEREGAERVTEDHVEEAQEKI 288 (383)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
T ss_conf 998620678789999999987687531576310088899999832