HHsearch alignment for GI: 254780567 and conserved domain: TIGR03415
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=96.20 E-value=0.0046 Score=38.76 Aligned_cols=43 Identities=28% Similarity=0.373 Sum_probs=30.7
Q ss_pred EECCCHHHHHHHHHHHHC---------------------CCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 653618999999985101---------------------6788499987877786889999998
Q gi|254780567|r 44 LVHSAIEQAVRLIDSWPS---------------------WPSRVVILVGPSGSGKSCLANIWSD 86 (246)
Q Consensus 44 iv~~~N~~A~~~i~~~~~---------------------~~~~~l~i~G~~GsGKTHLl~a~~~ 86 (246)
T Consensus 9 iFG~~~~~a~~~~~~g~~k~~i~~~tg~~vAV~dvsl~I~~GEi~~lvGpSGsGKSTLLr~i~G 72 (382)
T TIGR03415 9 VFGDQPAEALALLDQGKTREEILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNG 72 (382)
T ss_pred ECCCCHHHHHHHHHCCCCHHHHHHHHCCEEEEECCEEEECCCCEEEEECCCCCHHHHHHHHHHC
T ss_conf 5289989999999879998999883399998965174887998999999997349999999975