HHsearch alignment for GI: 254780567 and conserved domain: cd00983

>cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.
Probab=95.87  E-value=0.039  Score=33.02  Aligned_cols=95  Identities=18%  Similarity=0.224  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CC
Q ss_conf             8999999985101678-8499987877786889999998627-----620135676444546666665334332100-37
Q gi|254780567|r   49 IEQAVRLIDSWPSWPS-RVVILVGPSGSGKSCLANIWSDKSR-----STRFSNIAKSLDSILIDTRKPVLLEDIDLL-DF  121 (246)
Q Consensus        49 N~~A~~~i~~~~~~~~-~~l~i~G~~GsGKTHLl~a~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~iddi~~~-~~  121 (246)
T Consensus        39 Gs~~lD~alg~GGiP~GRivei~G~essGKTtlal~~ia~aQk~gg~~~~iDaE-~a~d~~~a~~l-GVD~~~l~~~qp~  116 (325)
T cd00983          39 GSLSLDIALGIGGYPKGRIIEIYGPESSGKTTLALHAIAEAQKLGGTVAFIDAE-HALDPVYAKKL-GVDLDNLLISQPD  116 (325)
T ss_pred             CCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHH-HCCCHHHHHHC-CCCHHHEEEECCC
T ss_conf             819999997589966880899988987779999999999987359839999625-42598999980-9984675896663


Q ss_pred             CCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             610335455543112342156403
Q gi|254780567|r  122 NDTQLFHIINSIHQYDSSLLMTAR  145 (246)
Q Consensus       122 ~ee~lf~l~n~~~~~~~~iilts~  145 (246)
T Consensus       117 ~~Eq~l~i~~~li~s~~~dliViD  140 (325)
T cd00983         117 TGEQALEIADSLVRSGAVDLIVVD  140 (325)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEC
T ss_conf             899999999997515887679981