HHsearch alignment for GI: 254780567 and conserved domain: cd01394

>cd01394 radB RadB. The archaeal protein radB shares similarity radA, the archaeal functional homologue to the bacterial RecA. The precise function of radB is unclear.

Probab=95.29  E-value=0.014  Score=35.79  Aligned_cols=24  Identities=29%  Similarity=0.441  Sum_probs=19.2

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             788499987877786889999998
Q gi|254780567|r   63 PSRVVILVGPSGSGKSCLANIWSD   86 (246)
Q Consensus        63 ~~~~l~i~G~~GsGKTHLl~a~~~   86 (246)
T Consensus        18 ~G~it~i~G~pG~GKStl~lq~a~   41 (218)
T cd01394          18 RGTVTQVYGPPGTGKTNIAIQLAV   41 (218)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHH
T ss_conf             887999989999849999999999