HHsearch alignment for GI: 254780567 and conserved domain: pfam00004
>pfam00004 AAA ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.
Probab=98.26 E-value=1.4e-06 Score=60.43 Aligned_cols=97 Identities=21% Similarity=0.306 Sum_probs=55.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCHHHHHH------------HHHHH----HHHHHHHHHHHHHHCCCCCC-------
Q ss_conf 99987877786889999998627620135676------------44454----66666653343321003761-------
Q gi|254780567|r 67 VILVGPSGSGKSCLANIWSDKSRSTRFSNIAK------------SLDSI----LIDTRKPVLLEDIDLLDFND------- 123 (246)
Q Consensus 67 l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~------------~~~~~----~~~~~~~i~iddi~~~~~~e------- 123 (246)
T Consensus 1 iLl~GppGtGKT~~a~~la~~~~~~~~~v~~~~~~~~~~g~~~~~i~~~f~~a~~~~p~Il~iDe~d~l~~~~~~~~~~~ 80 (131)
T pfam00004 1 LLLYGPPGTGKTTLAKAVAKELGAPFIEISGSELVSKYVGESEKRLRELFEAAKKLAPCVIFIDEIDALAGSRGSGGDSE 80 (131)
T ss_pred CEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCC
T ss_conf 98789999999999999999978985332420122233450688899999999974991898311677751678888875
Q ss_pred -----HHHHHHHHHHHCCCCC-EEEEECCCCCCHHHHHHHHH-HHHHHCC
Q ss_conf -----0335455543112342-15640354320022345667-8852122
Q gi|254780567|r 124 -----TQLFHIINSIHQYDSS-LLMTARTFPVSWGVCLPDLC-SRLKAAT 166 (246)
Q Consensus 124 -----e~lf~l~n~~~~~~~~-iilts~~~p~~~~~~l~DL~-SRl~~g~ 166 (246)
T Consensus 81 ~~~~~~~ll~~ld~~~~~~~~v~~I~tTN~~~~ld---~al~r~Rfd~~i 127 (131)
T pfam00004 81 SRRVVNQLLTELDGFTSSLSKVIVIAATNRPDKLD---PALLRGRFDRII 127 (131)
T ss_pred CHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHCC---HHHHCCCCEEEE
T ss_conf 13268789999850224688769999759904499---779628332899