HHsearch alignment for GI: 254780567 and conserved domain: pfam00406

Probab=95.49  E-value=0.053  Score=32.18  Aligned_cols=114  Identities=19%  Similarity=0.215  Sum_probs=55.4

Q ss_pred             EECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-HHHHHHHHHH-CCCCCCHHHHHHHHHHHC---CCCCEEEE
Q ss_conf             987877786889999998627620135676444546666-6653343321-003761033545554311---23421564
Q gi|254780567|r   69 LVGPSGSGKSCLANIWSDKSRSTRFSNIAKSLDSILIDT-RKPVLLEDID-LLDFNDTQLFHIINSIHQ---YDSSLLMT  143 (246)
Q Consensus        69 i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~iddi~-~~~~~ee~lf~l~n~~~~---~~~~iilt  143 (246)
T Consensus         1 i~G~PGsGKgTqa~~La~~~~~~~is~GdllR~~~~~~s~~g~~i~~~i~~G~lvpd~i~~~l~~~~l~~~~~~~g~iL-   79 (186)
T pfam00406         1 LLGPPGAGKGTQAERIVQKYGIVHLSTGDLLRAEVKSGTELGKEAKEYMDKGELVPDEVVVGLVKERLEQNDCKNGFLL-   79 (186)
T ss_pred             CCCCCCCCHHHHHHHHHHHHCCEEECHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEE-
T ss_conf             9188989859999999998599067699999999862887999999999869954309999999999707455486687-


Q ss_pred             ECCCCCCHHHHHHHHHHHHH----HCCEEEECCCCHHHHHHHHHHH
Q ss_conf             03543200223456678852----1222450788978999999998
Q gi|254780567|r  144 ARTFPVSWGVCLPDLCSRLK----AATVVKISLPDDDFLEKVIVKM  185 (246)
Q Consensus       144 s~~~p~~~~~~l~DL~SRl~----~g~~~~I~~pdde~~~~il~k~  185 (246)
T Consensus        80 -DGfPRt~~Q-a~~l~~~l~~~~~~~~Vi~l~~~~~~~~~Rl~~R~  123 (186)
T pfam00406        80 -DGFPRTVPQ-AEALEEMLEYGIKLDYVIEFDVPDEVLVERLTGRR  123 (186)
T ss_pred             -ECCCCCHHH-HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCC
T ss_conf             -379898999-99999999749987779999737899999997664