HHsearch alignment for GI: 254780567 and conserved domain: pfam03969
>pfam03969 AFG1_ATPase AFG1-like ATPase. This family of proteins contains a P-loop motif and are predicted to be ATPases.
Probab=98.59 E-value=1.1e-07 Score=67.25 Aligned_cols=114 Identities=20% Similarity=0.253 Sum_probs=66.9
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCC------CCHHH---HHHHH-------------HHHHHHHHHHHHHHHHHCCC
Q ss_conf 7884999878777868899999986276------20135---67644-------------45466666653343321003
Q gi|254780567|r 63 PSRVVILVGPSGSGKSCLANIWSDKSRS------TRFSN---IAKSL-------------DSILIDTRKPVLLEDIDLLD 120 (246)
Q Consensus 63 ~~~~l~i~G~~GsGKTHLl~a~~~~~~~------~~~~~---~~~~~-------------~~~~~~~~~~i~iddi~~~~ 120 (246)
T Consensus 60 ~~kGlYl~G~VGrGKTmLMDlFy~~lp~~~K~R~HFh~FM~~vH~~l~~~~~~~dpl~~va~~l~~~~~lLCfDEFqV~D 139 (361)
T pfam03969 60 PVRGLYLWGGVGRGKTHLMDSFFESLPGERKRRTHFHRFMFRVHDELTTLQGGDDPLPIAADRFANEARLLCFDEFEVDD 139 (361)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEEECC
T ss_conf 99868988998886999999999867753444566789999999999997667763899999997258779976356167
Q ss_pred CCCH-HHHHHHHHHHCCCCCEEEEECCCCCCHHH-------HHHHHHHHHHHCCEEEECCCCHH
Q ss_conf 7610-33545554311234215640354320022-------34566788521222450788978
Q gi|254780567|r 121 FNDT-QLFHIINSIHQYDSSLLMTARTFPVSWGV-------CLPDLCSRLKAATVVKISLPDDD 176 (246)
Q Consensus 121 ~~ee-~lf~l~n~~~~~~~~iilts~~~p~~~~~-------~l~DL~SRl~~g~~~~I~~pdde 176 (246)
T Consensus 140 IaDAMIL~rLf~~Lf~~gvvlV~TSN~~P~~LY~~GLqR~~FlPfI~ll~~~~~v~~l~~~~DY 203 (361)
T pfam03969 140 IGDAMILGRLFEALFARGVSLVATSNTAPEQLYRNGLNRQRFLPAIDLLESHFEVVRVDGPVDY 203 (361)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHCEEEEECCCCCC
T ss_conf 8889999999999997797899808999899836874177889999999986789981598780