HHsearch alignment for GI: 254780567 and conserved domain: pfam03969

>pfam03969 AFG1_ATPase AFG1-like ATPase. This family of proteins contains a P-loop motif and are predicted to be ATPases.
Probab=98.59  E-value=1.1e-07  Score=67.25  Aligned_cols=114  Identities=20%  Similarity=0.253  Sum_probs=66.9

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCC------CCHHH---HHHHH-------------HHHHHHHHHHHHHHHHHCCC
Q ss_conf             7884999878777868899999986276------20135---67644-------------45466666653343321003
Q gi|254780567|r   63 PSRVVILVGPSGSGKSCLANIWSDKSRS------TRFSN---IAKSL-------------DSILIDTRKPVLLEDIDLLD  120 (246)
Q Consensus        63 ~~~~l~i~G~~GsGKTHLl~a~~~~~~~------~~~~~---~~~~~-------------~~~~~~~~~~i~iddi~~~~  120 (246)
T Consensus        60 ~~kGlYl~G~VGrGKTmLMDlFy~~lp~~~K~R~HFh~FM~~vH~~l~~~~~~~dpl~~va~~l~~~~~lLCfDEFqV~D  139 (361)
T pfam03969        60 PVRGLYLWGGVGRGKTHLMDSFFESLPGERKRRTHFHRFMFRVHDELTTLQGGDDPLPIAADRFANEARLLCFDEFEVDD  139 (361)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEEECC
T ss_conf             99868988998886999999999867753444566789999999999997667763899999997258779976356167


Q ss_pred             CCCH-HHHHHHHHHHCCCCCEEEEECCCCCCHHH-------HHHHHHHHHHHCCEEEECCCCHH
Q ss_conf             7610-33545554311234215640354320022-------34566788521222450788978
Q gi|254780567|r  121 FNDT-QLFHIINSIHQYDSSLLMTARTFPVSWGV-------CLPDLCSRLKAATVVKISLPDDD  176 (246)
Q Consensus       121 ~~ee-~lf~l~n~~~~~~~~iilts~~~p~~~~~-------~l~DL~SRl~~g~~~~I~~pdde  176 (246)
T Consensus       140 IaDAMIL~rLf~~Lf~~gvvlV~TSN~~P~~LY~~GLqR~~FlPfI~ll~~~~~v~~l~~~~DY  203 (361)
T pfam03969       140 IGDAMILGRLFEALFARGVSLVATSNTAPEQLYRNGLNRQRFLPAIDLLESHFEVVRVDGPVDY  203 (361)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHCEEEEECCCCCC
T ss_conf             8889999999999997797899808999899836874177889999999986789981598780