HHsearch alignment for GI: 254780567 and conserved domain: pfam07724

>pfam07724 AAA_2 AAA domain (Cdc48 subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.

Probab=95.84  E-value=0.0087  Score=37.02  Aligned_cols=27  Identities=30%  Similarity=0.522  Sum_probs=22.4

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf             788499987877786889999998627
Q gi|254780567|r   63 PSRVVILVGPSGSGKSCLANIWSDKSR   89 (246)
Q Consensus        63 ~~~~l~i~G~~GsGKTHLl~a~~~~~~   89 (246)
T Consensus         2 p~~~~l~~GPsGvGKT~lAk~la~~l~   28 (168)
T pfam07724         2 PIGSFLFLGPTGVGKTELAKALAELLF   28 (168)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf             837999889899899999999999967