HHsearch alignment for GI: 254780567 and conserved domain: smart00763

>smart00763 AAA_PrkA PrkA AAA domain. This is a family of PrkA bacterial and archaeal serine kinases approximately 630 residues long. This is the N-terminal AAA domain.

Probab=95.04  E-value=0.036  Score=33.20  Aligned_cols=35  Identities=26%  Similarity=0.379  Sum_probs=24.1

Q ss_pred             HHHHHHHCC---CCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             999851016---78849998787778688999999862
Q gi|254780567|r   54 RLIDSWPSW---PSRVVILVGPSGSGKSCLANIWSDKS   88 (246)
Q Consensus        54 ~~i~~~~~~---~~~~l~i~G~~GsGKTHLl~a~~~~~   88 (246)
T Consensus        65 ~~~k~AA~g~~~~k~IllL~GPvGsGKStl~~~Lk~~l  102 (361)
T smart00763       65 NYFKSAAQGLEERKQILYLLGPVGGGKSSLVECLKRGL  102 (361)
T ss_pred             HHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             99999984467125699998899887799999999999