>TIGR02124 hypE hydrogenase expression/formation protein HypE; InterPro: IPR011854 This family contains HypE (or HupE), a protein required for expression of catalytically active hydrogenase in many systems. It appears to be an accessory protein involved in maturation rather than a regulatory protein involved in expression. HypE shows considerable homology to the thiamine-monophosphate kinase ThiL (IPR006283 from INTERPRO) and other enzymes..

Probab=100.00 E-value=3e-35 Score=267.25 Aligned_cols=288 Identities=20% Similarity=0.289 Sum_probs=232.2 Q ss_pred HHHHHHHHHHHHH-------HCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCC----CCHHHHH Q ss_conf 9999999999886-------2673543667773157565544688718999568887899999982885----5016888 Q gi|254780569|r 22 NRTVTQIKSAVKS-------TKRAGTIGEIGGFGGLFDLKKAGFVDPILVSSSDGVGTKLKIAIETGKN----DTIGIDL 90 (357) Q Consensus 22 ~~~v~~i~~~~~~-------t~~~~v~~~ig~f~~~~~l~~~~~~~p~Lv~~tDGVGTK~~ia~~~~~~----~~ig~Dl 90 (357) T Consensus 11 ~~~~~Li~~lF~~R~l~~~R~f~n~~L~~-~eDaA~l~~~g~-----~la~sTDS--------fVv~PlFFpGGDIGkLA 76 (345) T TIGR02124 11 KLMQQLIEELFLKRPLELKRAFGNEILAA-MEDAAVLELSGG-----RLAFSTDS--------FVVDPLFFPGGDIGKLA 76 (345) T ss_pred HHHHHHHHHHCCCCCCCCEEECCCCCCCC-CCCCCEECCCCC-----EEEEECCC--------EEECCCCCCCCCCCCEE T ss_conf 99999988703468611201248750056-677413217896-----08998076--------37546336986711177 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCC---EEEE Q ss_conf 88543467885411221100000332-----037899999999999998609522143010000013655663---3689 Q gi|254780569|r 91 VAMCVNDILTHGAEPLFFLDYLATSQ-----LNPDQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDRDYD---LAGF 162 (357) Q Consensus 91 vam~vNDi~~~GA~Pl~fldyia~~~-----l~~~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~~~D---lag~ 162 (357) T Consensus 77 VcGTvNDvav~GA~P~----YLs~gfIlEEGfp~e~L~~iv~Sm~~~A~~aGV~iV~GDT----KVV~kG~~D~iFINTt 148 (345) T TIGR02124 77 VCGTVNDVAVSGAKPL----YLSCGFILEEGFPIEDLERIVKSMAEAARKAGVKIVAGDT----KVVEKGKVDGIFINTT 148 (345) T ss_pred EECCHHHHHHCCCHHH----HHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCC----CCCCCCCCCEEEEEEE T ss_conf 7333246753384457----8507201340787678999999999999973976897573----5334577560588138 Q ss_pred EEEEECCC--CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHH Q ss_conf 99974154--2113334555248999538655432320344445531155456676666630668753972012268888 Q gi|254780569|r 163 AVGAVERK--ELLSPENVCAGDLILGLPSSGLHSNGFALVRKIISLSQLSWKDPSPISSEHSLGETLLTPTRIYVSPLLK 240 (357) Q Consensus 163 ~vG~v~k~--~ii~~~~i~~GD~IIgl~SsG~HsNGySLvRkil~~~~~~~~~~~~~~~~~tl~e~LL~PtriY~~~i~~ 240 (357) T Consensus 149 GiG~~~~~~v~~~~~~~~~~GD~Ii~sG~iG~H--G~~Il---~~Regl~f~~~i~-SDCapL~~-----------lv~~ 211 (345) T TIGR02124 149 GIGVVPSGGVIDISAHNIQPGDVIIVSGSIGDH--GAAIL---AVREGLGFETNIE-SDCAPLNG-----------LVEA 211 (345) T ss_pred EEEEECCCCCCCCCCCCCCCCCEEEECCCCHHH--HHHHH---HHHHCCCCCCCCC-CHHHHHHH-----------HHHH T ss_conf 888874784337653541457668981684067--89988---7650255256733-32776589-----------9999 Q ss_pred HHHCC---CCCCCCCCCCCCHHHHCCCCCC-CCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECH Q ss_conf 76304---6322223454201220120025-4430478710048986799999996698988987652467116999868 Q gi|254780569|r 241 ILRKT---GKIKALAHITGGGLTENIPRAI-PAHLTASINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCGIGMVIIVHP 316 (357) Q Consensus 241 ll~~~---~~i~~~ahITGGGl~~nL~RiL-p~gl~a~Id~~~~p~p~iF~~I~~~g~I~~~EM~rtFNmGiGmvlvV~~ 316 (357) T Consensus 212 ll~~~g~~~~v~~~RD~TRGGLA~vLNE~A~~sg~~i~l~E~~iPV~eeV~gaCE~LGldPl~lA---NEG~-~v~~V~~ 287 (345) T TIGR02124 212 LLAVGGYEPAVHAMRDATRGGLAAVLNEIAESSGVGIELEEEKIPVKEEVKGACELLGLDPLYLA---NEGK-LVLAVPP 287 (345) T ss_pred HHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHH---CCCE-EEEEECH T ss_conf 98437987142376167855047899999996199279985247883789999986170325420---4762-8998283 Q ss_pred HHHHHHHHHHHHC--CCCEE-EEEEEEECCCCCCEEEEEEE Q ss_conf 9899999999977--99808-99999977887200899631 Q gi|254780569|r 317 DNKDCIIKKFQEN--NENII-LIGEVTQRSEKSPPILYQGS 354 (357) Q Consensus 317 e~a~~v~~~l~~~--g~~a~-iIG~V~~~~~~~~~V~~~G~ 354 (357) T Consensus 288 E~A~~vLe~lk~hp~G~~A~YiIG~V~e~~~~--~V~l~t~ 326 (345) T TIGR02124 288 EAAEKVLEILKSHPLGKDAAYIIGEVVEKKEG--LVVLKTA 326 (345) T ss_pred HHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC--EEEEEEC T ss_conf 77999999986077643321563014737987--7999706

HHsearch alignment for GI: 254780569 and conserved domain: TIGR02124