HHsearch alignment for GI: 254780569 and conserved domain: cd06061

>cd06061 PurM-like1 AIR synthase (PurM) related protein, subgroup 1 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain.
Probab=100.00  E-value=1.1e-39  Score=298.37  Aligned_cols=275  Identities=21%  Similarity=0.329  Sum_probs=217.3

Q ss_pred             HCCCCCCCC--CCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             267354366--777315756554468871899956888789999998288550168888854346788541122110000
Q gi|254780569|r   35 TKRAGTIGE--IGGFGGLFDLKKAGFVDPILVSSSDGVGTKLKIAIETGKNDTIGIDLVAMCVNDILTHGAEPLFFLDYL  112 (357)
Q Consensus        35 t~~~~v~~~--ig~f~~~~~l~~~~~~~p~Lv~~tDGVGTK~~ia~~~~~~~~ig~Dlvam~vNDi~~~GA~Pl~fldyi  112 (357)
T Consensus        20 ~~~~~v~vg~~~gdDaavi~~~~-----~~lvvttDp~---------~~~~~~~G~~ava~~~sDI~amGa~P~~~l~~l   85 (298)
T cd06061          20 ADRDEVLVGPGGGEDAAVVDFGG-----KVLVVSTDPI---------TGAGKDAGWLAVHIAANDIATSGARPRWLLVTL   85 (298)
T ss_pred             CCCCCEEECCCCCCEEEEEEECC-----CEEEEECCCC---------CCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHE
T ss_conf             99988877899985259998689-----8799984883---------058136999999987999998599828876121


Q ss_pred             CCC-CHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf             033-2037899999999999998609522143010000013655663368999974154211333455524899953865
Q gi|254780569|r  113 ATS-QLNPDQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDRDYDLAGFAVGAVERKELLSPENVCAGDLILGLPSSG  191 (357)
Q Consensus       113 a~~-~l~~~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~~~Dlag~~vG~v~k~~ii~~~~i~~GD~IIgl~SsG  191 (357)
T Consensus        86 ~~p~~~~~~~l~~i~~Gi~~~~~~~g~~lvGGdT~~~~~~~---~~~i~~t~~G~~~~~~~~~~~~ak~GD~Iiltg~~G  162 (298)
T cd06061          86 LLPPGTDEEELKAIMREINEAAKELGVSIVGGHTEVTPGVT---RPIISVTAIGKGEKDKLVTPSGAKPGDDIVMTKGAG  162 (298)
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCC---CCEEEEEEEEEECCCCEECCCCCCCCCEEEEECCCC
T ss_conf             18899999999999999999999839956443158647877---767999999995688663067799999999989840


Q ss_pred             CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCC-CC
Q ss_conf             54323203444455311554566766666306687539720122688887630463222234542012201200254-43
Q gi|254780569|r  192 LHSNGFALVRKIISLSQLSWKDPSPISSEHSLGETLLTPTRIYVSPLLKILRKTGKIKALAHITGGGLTENIPRAIP-AH  270 (357)
Q Consensus       192 ~HsNGySLvRkil~~~~~~~~~~~~~~~~~tl~e~LL~PtriY~~~i~~ll~~~~~i~~~ahITGGGl~~nL~RiLp-~g  270 (357)
T Consensus       163 ~~~~~l--~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~-~~~~-~~~~-~~v~a~~Dis~gGL~~~L~e~~~~s~  233 (298)
T cd06061         163 IEGTAI--LANDFEEELKKRLS----EEELREAAKLFYKISVV-KEAL-IAAE-AGVTAMHDATEGGILGALWEVAEASG  233 (298)
T ss_pred             HHHHHH--HHHHHHHHHHCCCC----HHHHHHHHHHHCCCCHH-HHHH-HHHH-CCCEEEEECCCCHHHHHHHHHHHHCC
T ss_conf             768999--99870665523467----58899878754022239-9999-7510-57559871675527778999997469


Q ss_pred             EEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf             047871004898679999999669898898765246711699986898999999999779980899999
Q gi|254780569|r  271 LTASINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCGIGMVIIVHPDNKDCIIKKFQENNENIILIGEV  339 (357)
Q Consensus       271 l~a~Id~~~~p~p~iF~~I~~~g~I~~~EM~rtFNmGiGmvlvV~~e~a~~v~~~l~~~g~~a~iIG~V  339 (357)
T Consensus       234 vg~~I~~~~iPi~~~~~~~~~~~~~dp---~~~~~~G-~ll~~v~~~~~~~v~~~l~~~g~~a~vIGeV  298 (298)
T cd06061         234 VGLRIEKDKIPIRQETKEICEALGIDP---LRLISSG-TLLITVPPEKGDELVDALEEAGIPASVIGKI  298 (298)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHCCCCH---HHHHHCC-EEEEEECHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             749997754688879999999749788---8897088-7999998899999999999649796999869