HHsearch alignment for GI: 254780569 and conserved domain: cd06061
>cd06061 PurM-like1 AIR synthase (PurM) related protein, subgroup 1 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain.
Probab=100.00 E-value=1.1e-39 Score=298.37 Aligned_cols=275 Identities=21% Similarity=0.329 Sum_probs=217.3
Q ss_pred HCCCCCCCC--CCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 267354366--777315756554468871899956888789999998288550168888854346788541122110000
Q gi|254780569|r 35 TKRAGTIGE--IGGFGGLFDLKKAGFVDPILVSSSDGVGTKLKIAIETGKNDTIGIDLVAMCVNDILTHGAEPLFFLDYL 112 (357)
Q Consensus 35 t~~~~v~~~--ig~f~~~~~l~~~~~~~p~Lv~~tDGVGTK~~ia~~~~~~~~ig~Dlvam~vNDi~~~GA~Pl~fldyi 112 (357)
T Consensus 20 ~~~~~v~vg~~~gdDaavi~~~~-----~~lvvttDp~---------~~~~~~~G~~ava~~~sDI~amGa~P~~~l~~l 85 (298)
T cd06061 20 ADRDEVLVGPGGGEDAAVVDFGG-----KVLVVSTDPI---------TGAGKDAGWLAVHIAANDIATSGARPRWLLVTL 85 (298)
T ss_pred CCCCCEEECCCCCCEEEEEEECC-----CEEEEECCCC---------CCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHE
T ss_conf 99988877899985259998689-----8799984883---------058136999999987999998599828876121
Q ss_pred CCC-CHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 033-2037899999999999998609522143010000013655663368999974154211333455524899953865
Q gi|254780569|r 113 ATS-QLNPDQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDRDYDLAGFAVGAVERKELLSPENVCAGDLILGLPSSG 191 (357)
Q Consensus 113 a~~-~l~~~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~~~Dlag~~vG~v~k~~ii~~~~i~~GD~IIgl~SsG 191 (357)
T Consensus 86 ~~p~~~~~~~l~~i~~Gi~~~~~~~g~~lvGGdT~~~~~~~---~~~i~~t~~G~~~~~~~~~~~~ak~GD~Iiltg~~G 162 (298)
T cd06061 86 LLPPGTDEEELKAIMREINEAAKELGVSIVGGHTEVTPGVT---RPIISVTAIGKGEKDKLVTPSGAKPGDDIVMTKGAG 162 (298)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHCCCEECCEEEECCCCC---CCEEEEEEEEEECCCCEECCCCCCCCCEEEEECCCC
T ss_conf 18899999999999999999999839956443158647877---767999999995688663067799999999989840
Q ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCC-CC
Q ss_conf 54323203444455311554566766666306687539720122688887630463222234542012201200254-43
Q gi|254780569|r 192 LHSNGFALVRKIISLSQLSWKDPSPISSEHSLGETLLTPTRIYVSPLLKILRKTGKIKALAHITGGGLTENIPRAIP-AH 270 (357)
Q Consensus 192 ~HsNGySLvRkil~~~~~~~~~~~~~~~~~tl~e~LL~PtriY~~~i~~ll~~~~~i~~~ahITGGGl~~nL~RiLp-~g 270 (357)
T Consensus 163 ~~~~~l--~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~-~~~~-~~~~-~~v~a~~Dis~gGL~~~L~e~~~~s~ 233 (298)
T cd06061 163 IEGTAI--LANDFEEELKKRLS----EEELREAAKLFYKISVV-KEAL-IAAE-AGVTAMHDATEGGILGALWEVAEASG 233 (298)
T ss_pred HHHHHH--HHHHHHHHHHCCCC----HHHHHHHHHHHCCCCHH-HHHH-HHHH-CCCEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 768999--99870665523467----58899878754022239-9999-7510-57559871675527778999997469
Q ss_pred EEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 047871004898679999999669898898765246711699986898999999999779980899999
Q gi|254780569|r 271 LTASINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCGIGMVIIVHPDNKDCIIKKFQENNENIILIGEV 339 (357)
Q Consensus 271 l~a~Id~~~~p~p~iF~~I~~~g~I~~~EM~rtFNmGiGmvlvV~~e~a~~v~~~l~~~g~~a~iIG~V 339 (357)
T Consensus 234 vg~~I~~~~iPi~~~~~~~~~~~~~dp---~~~~~~G-~ll~~v~~~~~~~v~~~l~~~g~~a~vIGeV 298 (298)
T cd06061 234 VGLRIEKDKIPIRQETKEICEALGIDP---LRLISSG-TLLITVPPEKGDELVDALEEAGIPASVIGKI 298 (298)
T ss_pred CEEEEEECCCCCCHHHHHHHHHCCCCH---HHHHHCC-EEEEEECHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 749997754688879999999749788---8897088-7999998899999999999649796999869