HHsearch results for GI: 254780569 and protein with PDBid: 2yxz_A
>2yxz_A Thiamin-monophosphate kinase; alpha/beta structure, transferase; 1.90A {Thermus thermophilus HB8}
Probab=100.00 E-value=1.1e-35 Score=268.64 Aligned_cols=289 Identities=16% Similarity=0.163 Sum_probs=214.2
Q ss_pred HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999886267354366777315756554468871899956888789999998288550168888854346788541122
Q gi|254780569|r 27 QIKSAVKSTKRAGTIGEIGGFGGLFDLKKAGFVDPILVSSSDGVGTKLKIAIETGKNDTIGIDLVAMCVNDILTHGAEPL 106 (357)
Q Consensus 27 ~i~~~~~~t~~~~v~~~ig~f~~~~~l~~~~~~~p~Lv~~tDGVGTK~~ia~~~~~~~~ig~Dlvam~vNDi~~~GA~Pl 106 (357)
-|+.+...++++.+.-++|++|++++++. ..++.+||+...+......+..| .+|+++|++|+|||+||||+|+
T Consensus 11 li~~l~~~~~~~~~~~g~GdDaavi~~~~-----~~~~vstD~~~~~~~~~~~~~p~-~~G~~av~~~~sDi~a~Ga~P~ 84 (311)
T 2yxz_A 11 LLARLAPLGYPPEAPLPPGDDAGGVWAEG-----RAWLLKTDGFLYREVALKGMGPF-EVGFRGVAATASDLLAKMGRPL 84 (311)
T ss_dssp HHHHHTTTTCCTTCSSCTTSSSEEEEETT-----EEEEEEEEEEEHHHHCCTTCCHH-HHHHHHHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHCCCCCCCCCCCCCEEEEEECC-----CEEEEEECCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHHHCCCEEH
T ss_conf 99998740689887669996179997489-----74999977755676658999999-9999999999999998699306
Q ss_pred HHHHHHCCC-CHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 110000033-2037899999999999998609522143010000013655663368999974154211333455524899
Q gi|254780569|r 107 FFLDYLATS-QLNPDQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDRDYDLAGFAVGAVERKELLSPENVCAGDLIL 185 (357)
Q Consensus 107 ~fldyia~~-~l~~~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~~~Dlag~~vG~v~k~~ii~~~~i~~GD~II 185 (357)
+++++++++ +.+.+.++++++||.++|+++||+++||||++.|. ++.+++|+..++++++. +++|||.|+
T Consensus 85 ~~~~~l~~p~~~~~~~l~~i~~Gi~~a~~~~g~~lvGGdt~~~~~--------~~itv~g~~~~~~~~~~-~a~~GD~i~ 155 (311)
T 2yxz_A 85 GFTLGLFLPEDLEEGFVLELVRGAAEAAKRLGAFLLGGDTNRGVE--------VALTVSGYALAEAPLPR-KALPGDLLY 155 (311)
T ss_dssp EEEEEEEECTTCBHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSS--------CEEEEEEEEEESSCCCS-CCCTTCEEE
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCE--------EEEEEEEEECCCCCCCC-CCCCCCEEE
T ss_conf 664003488888899999999999998414556775101123650--------57899987413343224-468998689
Q ss_pred EECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC
Q ss_conf 95386554323203444455311554566766666306687539720122688887630463222234542012201200
Q gi|254780569|r 186 GLPSSGLHSNGFALVRKIISLSQLSWKDPSPISSEHSLGETLLTPTRIYVSPLLKILRKTGKIKALAHITGGGLTENIPR 265 (357)
Q Consensus 186 gl~SsG~HsNGySLvRkil~~~~~~~~~~~~~~~~~tl~e~LL~PtriY~~~i~~ll~~~~~i~~~ahITGGGl~~nL~R 265 (357)
-..+. ++..|..+..+ ..... ......+.+.++.|.... +++.....+++|.|||| ||..+|.|
T Consensus 156 vtg~~-~g~~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~~Disg-Gl~~~L~~ 219 (311)
T 2yxz_A 156 LAGDR-WGRTGAAIRAH---YEGRS------LEGFPKIREAAFYPLPRL-----ELLALSGLLRGSLDSSD-GLAETLWQ 219 (311)
T ss_dssp EESSC-TTHHHHHHHHH---HHTCC------CTTCHHHHHHHHCCCCCG-----GGGGGTTTCSEEEEESS-CHHHHHHH
T ss_pred EECCC-CHHHHHHHHHH---HCCCC------CCHHHHHHHHHHCCCHHH-----HHHHHHCCCCCCCHHHH-HHHHHHHH
T ss_conf 92786-70889999997---53776------310245788873872366-----66664144433330366-79999999
Q ss_pred CCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCC--CEEEEECHHHHHHHHHHHHHCCCCEEEEEEEEECC
Q ss_conf 2544304787100489867999999966989889876524671--16999868989999999997799808999999778
Q gi|254780569|r 266 AIPAHLTASINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCGI--GMVIIVHPDNKDCIIKKFQENNENIILIGEVTQRS 343 (357)
Q Consensus 266 iLp~gl~a~Id~~~~p~p~iF~~I~~~g~I~~~EM~rtFNmGi--GmvlvV~~e~a~~v~~~l~~~g~~a~iIG~V~~~~ 343 (357)
+ +++++.|+.+++|+.|....+. ...+..+...|++|- +|+++|+|++++++.+.++++|+++++||+|++++
T Consensus 220 ~--a~~g~~i~~~~ip~~~~~~~~~---~~~~~~~~~~l~~Gedy~ll~~v~~~~~~~v~~~~~~~gi~~~~IG~V~~~~ 294 (311)
T 2yxz_A 220 L--ADLGVGVEVEALPLYPDVLAFA---GSEEAALELVLYGGEEFEAVLVVPQEGAAAVEARAKAKGLPLFRAGRVVAGE 294 (311)
T ss_dssp H--HTTTCEEEECCCCCCHHHHHHH---SSHHHHHHHHHSCCCCCEEEEEECSTTHHHHHHHHHHTTCCEEEEEEEESSS
T ss_pred H--HCCCCCCEEECCCCCHHHHHHH---HCCCHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf 9--5698542231166888899987---4550469998418885389999868999999999987599979999998489
Q ss_pred CCCCEEEEEEEE
Q ss_conf 872008996315
Q gi|254780569|r 344 EKSPPILYQGSL 355 (357)
Q Consensus 344 ~~~~~V~~~G~~ 355 (357)
.|+++|.-
T Consensus 295 ----~v~~~~~~ 302 (311)
T 2yxz_A 295 ----GVYLRGAP 302 (311)
T ss_dssp ----CEEETTEE
T ss_pred ----CEEECCCC
T ss_conf ----77987829