HHsearch results for GI: 254780569 and protein with PDBid: 2z1u_A
>2z1u_A Hydrogenase expression/formation protein HYPE; alpha-beta fold, beta barrel, lyase; HET: ATP; 2.00A {Desulfovibrio vulgaris subsp} PDB: 2z1t_A*
Probab=100.00 E-value=1.6e-41 Score=309.71 Aligned_cols=312 Identities=19% Similarity=0.193 Sum_probs=236.0
Q ss_pred CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHH
Q ss_conf 98876678888890889899999999999998862673543667773157565544688718999568887899999982
Q gi|254780569|r 1 MNHERKRGLTYGQAGVNIEAGNRTVTQIKSAVKSTKRAGTIGEIGGFGGLFDLKKAGFVDPILVSSSDGVGTKLKIAIET 80 (357)
Q Consensus 1 m~~~~~~~~tY~~aGVdi~~~~~~v~~i~~~~~~t~~~~v~~~ig~f~~~~~l~~~~~~~p~Lv~~tDGVGTK~~ia~~~ 80 (357)
||.+. .-++|-..|. ..+ +.|++++.+++++.++ ++|..|++++++. .|+.+||+.--.. ..
T Consensus 3 ~~~~~-~~~~~g~ggk---~~~---~li~~~~~~~~~~~~~-~~gdDaavl~~~~------~lvvstD~~~~~~----~~ 64 (343)
T 2z1u_A 3 MSGET-LLLDYGSGGR---ASH---RLISDLFLRHFDNPIL-GTLNDAARLDLTG------PLAMSTDSYTVDP----IF 64 (343)
T ss_dssp ----C-CCGGGGTTSH---HHH---HHHHHTHHHHHCCHHH-HTCSSSCCCCCCS------SEEEEEEEECCSS----SE
T ss_pred CCCCE-EEECCCCCHH---HHH---HHHHHHHHHHCCCCCC-CCCCCEEEEECCC------CEEEEECCCCCCC----CC
T ss_conf 77775-8977788308---999---9999997751599776-8998769984799------6899954662187----35
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCE
Q ss_conf 885501688888543467885411221100000332-0378999999999999986095221430100000136556633
Q gi|254780569|r 81 GKNDTIGIDLVAMCVNDILTHGAEPLFFLDYLATSQ-LNPDQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDRDYDL 159 (357)
Q Consensus 81 ~~~~~ig~Dlvam~vNDi~~~GA~Pl~fldyia~~~-l~~~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~~~Dl 159 (357)
..++.+|+.+|++|+|||+||||+|++|++++.+++ .+.+.++++++||+++|+++||+++||||+.+|... .....+
T Consensus 65 ~~~~~iG~~av~~~vsDi~a~Ga~P~~~~~~l~~p~~~~~~~l~~i~~Gi~~a~~~~gv~lvGG~T~~~~~~~-~~~~~i 143 (343)
T 2z1u_A 65 FPGGDIGTLAVHGTVNDVSMLGARPRYLSCGFILEEGLDMDILERVVASMGKAAREAGVFIVTGDTKVVPRGA-CDKMFI 143 (343)
T ss_dssp ETTEEHHHHHHHHHHHHHHTTTEEEEEEEEEEEEETTCCHHHHHHHHHHHHHHHHHHTCEEEEEEEEEECTTS-SSSEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCEEEECCCCC-CCCCEE
T ss_conf 8915789999999999999869985201674306899999999999999999986318396077468724776-788568
Q ss_pred EEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHH
Q ss_conf 68999974154211333455524899953865543232034444553115545667666663066875397201226888
Q gi|254780569|r 160 AGFAVGAVERKELLSPENVCAGDLILGLPSSGLHSNGFALVRKIISLSQLSWKDPSPISSEHSLGETLLTPTRIYVSPLL 239 (357)
Q Consensus 160 ag~~vG~v~k~~ii~~~~i~~GD~IIgl~SsG~HsNGySLvRkil~~~~~~~~~~~~~~~~~tl~e~LL~PtriY~~~i~ 239 (357)
++|++|.+++++++..+++++||.|+..++.|.|..++++.++-. ..... +....+.+.+.+.
T Consensus 144 s~t~iG~~~~~~~~~~~~a~~GD~Iiltg~~G~~g~~~~~~~~~~-----~~~~~------------~~~~~~~~~~~~~ 206 (343)
T 2z1u_A 144 NTTGIGEILVDPAPSGDRARPGDAILISGSMGDHGLTILSQRQGL-----NFAAD------------VCSDSASLNRVVE 206 (343)
T ss_dssp EEEEEEEECCSSCCCGGGCCTTCEEEECSCSSHHHHHHHHHTTTC-----CCCTT------------CCCCCCCCHHHHH
T ss_pred EEEEEEEEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHCCC-----CCCHH------------HHHHHHHHHHHHH
T ss_conf 899989864201210355899988999777727799999864155-----42024------------5565643316789
Q ss_pred HHHHCCCCCCCCCCCCCCHHHHCCCCCC-CCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECHHH
Q ss_conf 8763046322223454201220120025-443047871004898679999999669898898765246711699986898
Q gi|254780569|r 240 KILRKTGKIKALAHITGGGLTENIPRAI-PAHLTASINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCGIGMVIIVHPDN 318 (357)
Q Consensus 240 ~ll~~~~~i~~~ahITGGGl~~nL~RiL-p~gl~a~Id~~~~p~p~iF~~I~~~g~I~~~EM~rtFNmGiGmvlvV~~e~ 318 (357)
.++.+...+++|+|||+|||..+|.|+. .++++++|+.+++|+++.++++++..+++ +|..|++| +|+++|+|++
T Consensus 207 ~~l~~~~~i~a~~Dit~gGL~~~L~ema~~sg~g~~I~~~~ip~~~~~~~~~~~~~~~---~l~~~~~g-~ll~~v~~e~ 282 (343)
T 2z1u_A 207 KLVLEVGDIHVLRDPTRGGLATTLNEIAGQSQAVCHVLETAVPVRESVRNGCSFLGLD---PLYLANEG-KLICILPEER 282 (343)
T ss_dssp HHHHHTCCCCEEECCCTTHHHHHHHHHHHHHTSEEEEEGGGSCCCHHHHHHHHHTTCC---TTSSCCSS-CCEEEECHHH
T ss_pred HHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCC---HHHHCCCC-EEEEEEEHHH
T ss_conf 9997516741897537871698999999985944999663579988999998761642---68628863-0999991799
Q ss_pred HHHHHHHHHHC--CCCEEEEEEEEECCCC----CCEEEEE
Q ss_conf 99999999977--9980899999977887----2008996
Q gi|254780569|r 319 KDCIIKKFQEN--NENIILIGEVTQRSEK----SPPILYQ 352 (357)
Q Consensus 319 a~~v~~~l~~~--g~~a~iIG~V~~~~~~----~~~V~~~ 352 (357)
++++++.|+++ |++|++||+|+++++. ..+|+.+
T Consensus 283 ~e~i~~~l~~~~~G~~a~vIG~Vt~~~~~~~~~~g~v~~~ 322 (343)
T 2z1u_A 283 AEAALAVLREGPHGEHAARIGSVKSVGELGAARAGQVVME 322 (343)
T ss_dssp HHHHHHHHHTSTTGGGCEEEEEEECTTSSSSCCTTCEEEE
T ss_pred HHHHHHHHHHCCCCCCEEEEEEEEECCCEEECCCCEEEEE
T ss_conf 9999999974788998599999997894750569979997