HHsearch results for GI: 254780569 and protein with PDBid: 3c9u_A
>3c9u_A Thiamine monophosphate kinase; beta barrel, alpha-beta structure, transferase; HET: TPP ADP; 1.48A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 3c9r_A* 3c9t_A* 3c9s_A* 1vqv_A
Probab=99.97 E-value=3.8e-31 Score=236.95 Aligned_cols=304 Identities=17% Similarity=0.228 Sum_probs=213.6
Q ss_pred CCCHHHHCCCHHHHHHHHHHH-------HH--------HHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCH
Q ss_conf 888889088989999999999-------99--------988626735436677731575655446887189995688878
Q gi|254780569|r 8 GLTYGQAGVNIEAGNRTVTQI-------KS--------AVKSTKRAGTIGEIGGFGGLFDLKKAGFVDPILVSSSDGVGT 72 (357)
Q Consensus 8 ~~tY~~aGVdi~~~~~~v~~i-------~~--------~~~~t~~~~v~~~ig~f~~~~~l~~~~~~~p~Lv~~tDGVGT 72 (357)
.+-|+++|+...+..+.+... ++ .+.+.+.+ .+||.-+++++++. -.+|.+||..-.
T Consensus 12 ~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~lgE~~lI~~~~~~~~~---~~iGDDaAvi~~~~-----~~lvvstD~~~e 83 (342)
T 3c9u_A 12 TSLYKKAGSAAAVLEENLYFQGSFTMRLKELGEFGLIDLIKKTLES---KVIGDDTAPVEYCS-----KKLLLTTDVLNE 83 (342)
T ss_dssp -----------------------CCCBHHHHCHHHHHHHHHHHHTC---SSTTSSSEEEEETT-----EEEEEEEEEEEB
T ss_pred HHHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHCCC---CCCCCCEEEEECCC-----CEEEEEECCCCC
T ss_conf 6763263588999999877525687661426879999999852789---99987876896099-----809999466787
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCC
Q ss_conf 99999982885501688888543467885411221100000332-03789999999999999860952214301000001
Q gi|254780569|r 73 KLKIAIETGKNDTIGIDLVAMCVNDILTHGAEPLFFLDYLATSQ-LNPDQATSIIKGIAAGCCQAGCALIGGETAEMPGL 151 (357)
Q Consensus 73 K~~ia~~~~~~~~ig~Dlvam~vNDi~~~GA~Pl~fldyia~~~-l~~~~~~~ii~gi~~~c~~~g~~liGGETAemP~v 151 (357)
....-.. .....+|+.+|++|+|||+||||+|+++++++..++ .+.+.++++++||.++|+++||+++||||...+
T Consensus 84 ~~hf~~~-~~p~~iG~~av~~~vsDIaamGa~P~~~l~sl~lp~~~~~~~l~~i~~Gi~~a~~~~gv~ivGGdt~~~~-- 160 (342)
T 3c9u_A 84 GVHFLRS-YIPEAVGWKAISVNVSDVIANGGLPKWALISLNLPEDLEVSYVERFYIGVKRACEFYKCEVVGGNISKSE-- 160 (342)
T ss_dssp TTTBCTT-SCHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECTTSBHHHHHHHHHHHHHHHHHHTCEEEEEEEEECS--
T ss_pred CCCCCCC-CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCE--
T ss_conf 7667999-9989999999999999999858954600031107751249999999999999975004624526743311--
Q ss_pred CCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCC
Q ss_conf 36556633689999741542113334555248999538655432320344445531155456676666630668753972
Q gi|254780569|r 152 YHDRDYDLAGFAVGAVERKELLSPENVCAGDLILGLPSSGLHSNGFALVRKIISLSQLSWKDPSPISSEHSLGETLLTPT 231 (357)
Q Consensus 152 y~~~~~Dlag~~vG~v~k~~ii~~~~i~~GD~IIgl~SsG~HsNGySLvRkil~~~~~~~~~~~~~~~~~tl~e~LL~Pt 231 (357)
.+.++.|++|.++ +.+..+++++||.|+....-|.+.-++...+ .. .. .. ......+.+.++.|+
T Consensus 161 ----~~~i~vt~iG~~~--k~i~r~~a~~GD~I~vtg~lG~~~~~l~~~~----~~-~~--~~--~~~~~~~~~~~~~~~ 225 (342)
T 3c9u_A 161 ----KIGISVFLVGETE--RFVGRDGARLGDSVFVSGTLGDSRAGLELLL----ME-KE--EY--EPFELALIQRHLRPT 225 (342)
T ss_dssp ----SCEEEEEEEEEES--SCCCSSCCCTTCEEEEESCSSHHHHHHHHHH----TT-CS--CC--CHHHHHHHHHHHSCC
T ss_pred ----ECCCCEEEEECCC--CCCCCCCCCCCCEEEEECCCCCCHHHHHHHH----HC-CC--CC--CHHHHHHHHHHHCCC
T ss_conf ----0121024466257--4211367888980699537750066899985----21-22--34--316689999874656
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCC-CCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCC--C
Q ss_conf 0122688887630463222234542012201200254-430478710048986799999996698988987652467--1
Q gi|254780569|r 232 RIYVSPLLKILRKTGKIKALAHITGGGLTENIPRAIP-AHLTASINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCG--I 308 (357)
Q Consensus 232 riY~~~i~~ll~~~~~i~~~ahITGGGl~~nL~RiLp-~gl~a~Id~~~~p~p~iF~~I~~~g~I~~~EM~rtFNmG--i 308 (357)
... .....+ .+ .++++.+ |.|||...|.++.. ++++++|+.+.+|+++.++++++..++++.++. |+.| .
T Consensus 226 ~~~-~~~~~l-~~--~~~a~~d-~sdGL~~~L~ela~~Sgvg~~I~~~~IPv~~~~~~~~~~~~~dpl~~~--l~gGEDy 298 (342)
T 3c9u_A 226 ARI-DYVKHI-QK--YANASMD-ISDGLVADANHLAQRSGVKIEILSEKLPLSNELKMYCEKYGKNPIEYA--LFGGEDY 298 (342)
T ss_dssp CCG-GGHHHH-HH--HCSEEEE-ESSCHHHHHHHHHHHHTCEEEECGGGSCCCHHHHHHHHHTTCCHHHHH--HHCCCCC
T ss_pred CCH-HHHHHH-HH--HCCCCCC-CCCHHHHHHHHHHHHCCCCEEHHHHHCCCCHHHHHHHHHCCCCHHHHH--HCCCCCC
T ss_conf 338-999998-64--2203666-554178899999997399502008558898899999998499989998--5198721
Q ss_pred CEEEEECHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEEEC
Q ss_conf 169998689899999999977998089999997788720089963151
Q gi|254780569|r 309 GMVIIVHPDNKDCIIKKFQENNENIILIGEVTQRSEKSPPILYQGSLI 356 (357)
Q Consensus 309 GmvlvV~~e~a~~v~~~l~~~g~~a~iIG~V~~~~~~~~~V~~~G~~~ 356 (357)
.++++++|+.++++ .++++||+|++++ .|+++|+-+
T Consensus 299 ~ll~t~~~~~~~~~--------i~~~~IG~Vteg~----~v~idg~~i 334 (342)
T 3c9u_A 299 QLLFTHPKERWNPF--------LDMTEIGRVEEGE----GVFVDGKKV 334 (342)
T ss_dssp EEEEEECGGGCCTT--------SCEEEEEEEESSS----SEEETTEEC
T ss_pred EEEEEECHHHHHCC--------CCEEEEEEEECCC----CEEECCCCC
T ss_conf 79999778887367--------9849999997799----879719998