HHsearch results for GI: 254780569 and protein with PDBid: 3p4e_A
>3p4e_A Phosphoribosylformylglycinamidine cyclo-ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: AMP CIT; 1.77A {Vibrio cholerae} PDB: 1cli_A
Probab=100.00 E-value=0 Score=841.09 Aligned_cols=346 Identities=48% Similarity=0.852 Sum_probs=330.7
Q ss_pred CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHH
Q ss_conf 98876678888890889899999999999998862673543667773157565544688718999568887899999982
Q gi|254780569|r 1 MNHERKRGLTYGQAGVNIEAGNRTVTQIKSAVKSTKRAGTIGEIGGFGGLFDLKKAGFVDPILVSSSDGVGTKLKIAIET 80 (357)
Q Consensus 1 m~~~~~~~~tY~~aGVdi~~~~~~v~~i~~~~~~t~~~~v~~~ig~f~~~~~l~~~~~~~p~Lv~~tDGVGTK~~ia~~~ 80 (357)
|+ ++++++||++|||||+++|+++++||+++++|++++|++++|+|||+|+++. +|++|+||++|||||||+++|+++
T Consensus 4 m~-~~~~~~tY~~aGVdi~~~~~~~~~ik~~~~~t~~~~v~~~iG~f~~~~~~~~-~~~~p~Lv~~tDGvGTK~~~a~~~ 81 (349)
T 3p4e_A 4 MS-GNNPSLSYKDAGVDIDAGNALVERIKGAVKRTRRPEVMGGLGGFGALCELPT-KYKHPVLVSGTDGVGTKLRLALDM 81 (349)
T ss_dssp ------------------CHHHHHHHHHHHHHHHTCCTTEEC------CEECCCT-TCSSEEEEEEEECCTHHHHHHHHT
T ss_pred CC-CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCC-CCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 68-8999997889686999999999999999985079765567788536777522-479846998578764889999984
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCEE
Q ss_conf 88550168888854346788541122110000033203789999999999999860952214301000001365566336
Q gi|254780569|r 81 GKNDTIGIDLVAMCVNDILTHGAEPLFFLDYLATSQLNPDQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDRDYDLA 160 (357)
Q Consensus 81 ~~~~~ig~Dlvam~vNDi~~~GA~Pl~fldyia~~~l~~~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~~~Dla 160 (357)
++|++|||||||||||||+||||+|+|||||+++++++++.+++|++||+++|+++||+|+||||||||++|++++|||+
T Consensus 82 ~~~~~iG~D~Vam~vNDi~~~GA~Pl~fldy~a~~~l~~~~~~~iv~Gi~~~c~~~g~~liGGETaemp~~~~~~~~dla 161 (349)
T 3p4e_A 82 KKHDTIGIDLVAMCVNDLIVQGAEPLFFLDYYATGKLDVDTAAEVISGIADGCLQAGCALIGGETAEMPGMYEGEDYDVA 161 (349)
T ss_dssp TCCSSHHHHHHHHHHHHHHTTTCEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHTCEEEEEEEEECBTTBCTTCEEEE
T ss_pred CCCCCHHHHHHHHHCCCHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEE
T ss_conf 67644888899874330665587986643553268873588999999999999983975246775423565446732033
Q ss_pred EEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHH
Q ss_conf 89999741542113334555248999538655432320344445531155456676666630668753972012268888
Q gi|254780569|r 161 GFAVGAVERKELLSPENVCAGDLILGLPSSGLHSNGFALVRKIISLSQLSWKDPSPISSEHSLGETLLTPTRIYVSPLLK 240 (357)
Q Consensus 161 g~~vG~v~k~~ii~~~~i~~GD~IIgl~SsG~HsNGySLvRkil~~~~~~~~~~~~~~~~~tl~e~LL~PtriY~~~i~~ 240 (357)
|||||+|+|++++++++++|||+|||++|+|+|||||||+||+++.......++ ..+++++|+||+|||+|++.+++
T Consensus 162 g~~vGivek~~ii~~~~ik~GD~IIgl~SsG~HsNG~sL~Rkil~~~~~~~~~~---~~~~~lge~ll~Pt~iY~~~i~~ 238 (349)
T 3p4e_A 162 GFCVGVVEKEEIIDGSKVQVGDALIAVGSSGPHSNGYSLVRKILEVSKADKNER---LAGKTIGEHLLAPTKIYIKSGLK 238 (349)
T ss_dssp EEEEEEEEGGGCCCSTTCCTTCEEEEEECSSSTTSSHHHHHHHHHHHTCCTTCE---ETTEEHHHHHHCCCCCCHHHHHH
T ss_pred EEEEEEEEHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCC---CCCCCHHHHHCCCCHHHHHHHHH
T ss_conf 069999985565883336778479993578767776136677776514553434---57877778515762466889998
Q ss_pred HHHCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECHHHHH
Q ss_conf 76304632222345420122012002544304787100489867999999966989889876524671169998689899
Q gi|254780569|r 241 ILRKTGKIKALAHITGGGLTENIPRAIPAHLTASINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCGIGMVIIVHPDNKD 320 (357)
Q Consensus 241 ll~~~~~i~~~ahITGGGl~~nL~RiLp~gl~a~Id~~~~p~p~iF~~I~~~g~I~~~EM~rtFNmGiGmvlvV~~e~a~ 320 (357)
+++. ..||+|+|||||||++|++|++|+++.+.|+.++||+||+|+|||+.|+++++|||||||||+||+++|+|++++
T Consensus 239 l~~~-~~i~g~ahITGGGl~~nl~ril~~~~~~~I~~~~~~~p~if~~i~~~g~i~~~Em~~tFN~GiGmvliV~~~~~~ 317 (349)
T 3p4e_A 239 LIAE-HDIHAISHITGGGFWENIPRVLPEGTKAVIDGKSWEWPVIFQWLQEKGNVTTHEMYRTFNCGVGLIIALPKDQAN 317 (349)
T ss_dssp HHHH-SCCCEEEECCTTHHHHHGGGGCCTTEEEEECTTSCCCCHHHHHHHHHHTCCHHHHHTTSCTTEEEEEEECHHHHH
T ss_pred HHHC-CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECHHHHH
T ss_conf 7540-455520003665412366310467860353100268748999999968989999998617873399998889999
Q ss_pred HHHHHHHHCCCCEEEEEEEEECCCCCCEEEEE
Q ss_conf 99999997799808999999778872008996
Q gi|254780569|r 321 CIIKKFQENNENIILIGEVTQRSEKSPPILYQ 352 (357)
Q Consensus 321 ~v~~~l~~~g~~a~iIG~V~~~~~~~~~V~~~ 352 (357)
++++.+++++++||+||+|+++++++++|.++
T Consensus 318 ~vl~~l~~~g~~a~iIG~V~~~~~~~~~V~in 349 (349)
T 3p4e_A 318 AAVALLQAEGETAWVIGEIAAANSNEAQVEIN 349 (349)
T ss_dssp HHHHHHHHTTCCEEEEEEEEECCSSSCSEEEC
T ss_pred HHHHHHHHCCCCCEEEEEEEECCCCCCEEEEC
T ss_conf 99999986799878989999789997669849