RPSBLAST alignment of GI: 254780569 and protein with PDBid: 1vk3

>1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* Length = 615

 Score = 49.8 bits (118), Expect = 9e-07
 Identities = 37/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%)

Query: 95  VNDILTHGAEPLFFLDYLATSQLNPDQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHD 154
           + D+L  GA P    D L  S++       II+GIA      G   +GGE   +  LY  
Sbjct: 104 IRDVLAMGARPTAIFDSLHMSRI----IDGIIEGIADYGNSIGVPTVGGEL-RISSLYAH 158

Query: 155 RDYDLAGFAVGAVERKELLSPENVCAGDLI-LGLPSSGLHSNGFALVRKIISLSQLSWKD 213
                   A G V    L+  +    G +I +   ++G      A      +   L+   
Sbjct: 159 NPLVNVL-AAGVVRNDMLVDSKASRPGQVIVIFGGATGRDGIHGASF----ASEDLTGDK 213

Query: 214 PSPISSEHSLGETLLTPTRIYVSPLLKILRKTGKIKALAHITGGGLTENIPRAIPAHLTA 273
            + +S +             +       + + G ++    +  GG+       +      
Sbjct: 214 ATKLSIQVGDPFAEKMLIEAF-----LEMVEEGLVEGAQDLGAGGVLSATSELVAK---- 264

Query: 274 SINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCGIGMVIIVHPDNKDCIIKKFQENNENI 333
                ++     +  +  +        +        M ++  P     I++  +++    
Sbjct: 265 ----GNLGAIVHLDRVPLREPDMEPWEILISESQERMAVVTSPQKASRILEIARKHLLFG 320

Query: 334 ILIGEV 339
            ++ EV
Sbjct: 321 DVVAEV 326