HHsearch alignment for GI: 254780570 and conserved domain: COG0223
>COG0223 Fmt Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=1.3e-35 Score=266.35 Aligned_cols=177 Identities=27% Similarity=0.403 Sum_probs=148.9
Q ss_pred CEEEEEECCCCH----HHHHHHHHHHCCCCCCEEEEEEEC--CCCC--------HHHHHHHHCCCCEEEEECCCCCCCCC
Q ss_conf 659999769850----189999999739998479999976--8888--------78889986089504630132332210
Q gi|254780570|r 4 KNIVIFISGEGT----NMLSLIQATKKNDYPAEIVGVFSD--NSNA--------QGLVKARKEKVPTFPIPYKDYISRRE 69 (205)
Q Consensus 4 ~riavl~SG~Gs----nl~~Il~~~~~~~~~~eI~~Visn--~~da--------~~l~~a~~~~Ip~~~i~~~~~~~~~~ 69 (205)
T Consensus 2 mkivF~--GTp~fa~~~L~~L~~------~~~eivaV~Tqpdkp~gR~~~l~~spVk~~A~~~~ipv~q--P~~l~~--- 68 (307)
T COG0223 2 MRIVFF--GTPEFAVPSLEALIE------AGHEIVAVVTQPDKPAGRGKKLTPSPVKRLALELGIPVFQ--PEKLND--- 68 (307)
T ss_pred CEEEEE--CCCHHHHHHHHHHHH------CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEC--CCCCCC---
T ss_conf 179997--674454999999982------8980489994899766787858888389999974995566--444786---
Q ss_pred HHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCC
Q ss_conf 12432100012343036431122205721321066542313532233324442121000024653445303312321866
Q gi|254780570|r 70 HEKAILMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEG 149 (205)
Q Consensus 70 ~~~~l~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G 149 (205)
T Consensus 69 --~e~~~~l~~l~~D~ivvvayG~ilp~~iL~~~~~G~iNvH~SLLPr~RGaAPIq~aI~~Gd~~TGvTim~M~~~lDaG 146 (307)
T COG0223 69 --PEFLEELAALDPDLIVVVAYGQILPKEILDLPPYGCINLHPSLLPRYRGAAPIQWAILNGDTETGVTIMQMDEGLDAG 146 (307)
T ss_pred --HHHHHHHHCCCCCEEEEEEHHHHCCHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCC
T ss_conf --899999860399999997422237799980576774986675471113844789999759860124988822457876
Q ss_pred CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 2677899871899899999999999999999999999986956998
Q gi|254780570|r 150 PIIAQAAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNS 195 (205)
Q Consensus 150 ~Ii~q~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~ 195 (205)
T Consensus 147 ~Il~q~~~~I~~~dta~~L~~kLa~~ga~lL~~~L~~i~~g~~~~~ 192 (307)
T COG0223 147 DILAQREVPIEPDDTAGSLHDKLAELGAELLLETLPQLEAGTLTPI 192 (307)
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 6402677045774258899999999999999999999965998777