HHsearch alignment for GI: 254780570 and conserved domain: PRK00143
>PRK00143 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Reviewed.
Probab=92.99 E-value=0.66 Score=26.90 Aligned_cols=59 Identities=17% Similarity=0.406 Sum_probs=38.2
Q ss_pred CCCCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEE---CCCC----C-------HHHHHHHHCCCCEEEEECCC
Q ss_conf 9866599997698-5018999999973999847999997---6888----8-------78889986089504630132
Q gi|254780570|r 1 MIRKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFS---DNSN----A-------QGLVKARKEKVPTFPIPYKD 63 (205)
Q Consensus 1 M~k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Vis---n~~d----a-------~~l~~a~~~~Ip~~~i~~~~ 63 (205)
T Consensus 2 ~sk~rV~VamSGGVDSsVaA~LL~-~~---Gy~V~Gv~m~~w~~~~~~~~C~~~~d~~dA~~va~~LgIp~~v~d~~~ 75 (355)
T PRK00143 2 PSKKRVVVGMSGGVDSSVAAALLK-EQ---GYDVIGLFMKLWDDDDGSGGCCAEEDIADARAVADKLGIPLYVVDFAK 75 (355)
T ss_pred CCCCEEEEEECCCHHHHHHHHHHH-HC---CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHH
T ss_conf 988889999167899999999999-77---995899999887688777899857889999999998698579968699