HHsearch alignment for GI: 254780570 and conserved domain: PRK05447
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.
Probab=94.50 E-value=0.13 Score=31.73 Aligned_cols=84 Identities=15% Similarity=0.106 Sum_probs=50.0
Q ss_pred CCEEEEEECCC--CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCC--------CCC-HH
Q ss_conf 66599997698--50189999999739998479999976888878889986089504630132332--------210-12
Q gi|254780570|r 3 RKNIVIFISGE--GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYIS--------RRE-HE 71 (205)
Q Consensus 3 k~riavl~SG~--Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~--------~~~-~~ 71 (205)
T Consensus 1 mk~i~IlGsTGSIG~~tL~Vi~~---~~~~f~v~~lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~~~~~~~~~~~~g~ 77 (379)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRR---HPDRFRVVALSAGSNVELLAEQIREFRPKYVVVADEAAAKELKAALAGKVLAGE 77 (379)
T ss_pred CCEEEEECCCCHHHHHHHHHHHH---CCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCEEECH
T ss_conf 97899985695888999999995---868758999992897999999999949999999288999999875588288688
Q ss_pred HHHHHHCCCCCCEEEEEE
Q ss_conf 432100012343036431
Q gi|254780570|r 72 KAILMQLSSIQPDLICLA 89 (205)
Q Consensus 72 ~~l~~~l~~~~~Dliv~~ 89 (205)
T Consensus 78 ~~l~~~~~~~~~D~vi~a 95 (379)
T PRK05447 78 EGLCELAALPEADVVVAA 95 (379)
T ss_pred HHHHHHHHCCCCCEEEEE
T ss_conf 999999736789999981