Query         gi|254780570|ref|YP_003064983.1| phosphoribosylglycinamide formyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 205
No_of_seqs    135 out of 5334
Neff          6.9 
Searched_HMMs 33803
Date          Wed Jun  1 17:58:30 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780570.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >3lou_A Formyltetrahydrofolate 100.0 2.5E-41 1.4E-45  305.2  19.6  198    2-202     1-198 (199)
  2 >1jkx_A GART;, phosphoribosylg 100.0 5.5E-41 1.4E-45  302.9  20.8  198    4-201     1-198 (212)
  3 >2ywr_A Phosphoribosylglycinam 100.0 6.2E-41 1.4E-45  302.5  19.7  198    3-200     1-198 (216)
  4 >3kcq_A Phosphoribosylglycinam 100.0 1.3E-40 4.2E-45  300.3  17.6  193    3-200     8-200 (215)
  5 >1meo_A Phosophoribosylglycina 100.0 2.6E-40   7E-45  298.2  18.7  196    4-199     1-196 (209)
  6 >3da8_A Probable 5'-phosphorib 100.0 1.3E-39 3.8E-44  293.4  18.2  198    3-202    12-209 (215)
  7 >1fmt_A Methionyl-tRNA FMet fo 100.0 3.2E-37 9.5E-42  276.9  14.7  184    3-197     3-196 (204)
  8 >2bw0_A 10-FTHFDH, 10-formylte 100.0 4.2E-37 1.3E-41  276.0  13.9  194    1-196    18-214 (232)
  9 >1z7e_A Protein aRNA; rossmann 100.0 2.2E-36 6.4E-41  271.2   9.2  180    4-196     1-189 (207)
 10 >2bln_A Protein YFBG; transfer 100.0 2.2E-36 6.4E-41  271.2   8.2  180    4-196     1-189 (207)
 11 >1zgh_A Methionyl-tRNA formylt 100.0 5.5E-33 1.6E-37  247.7   6.4  178    4-197     8-185 (201)
 12 >1f0k_A MURG, UDP-N-acetylgluc  94.9    0.11 3.3E-06   31.8   6.7  110    3-116     6-132 (196)
 13 >3e9m_A Oxidoreductase, GFO/ID  94.1    0.16 4.8E-06   30.7   6.0   72    1-89      3-74  (181)
 14 >3evn_A Oxidoreductase, GFO/ID  92.3    0.24 7.2E-06   29.4   4.7   73    1-90      3-75  (181)
 15 >3db2_A Putative NADPH-depende  92.1    0.59 1.7E-05   26.8   6.5   72    1-90      3-74  (183)
 16 >2o4u_X Dimeric dihydrodiol de  92.0    0.75 2.2E-05   26.1   7.0   72    2-89      1-73  (184)
 17 >2pn1_A Carbamoylphosphate syn  91.8    0.26 7.8E-06   29.2   4.4   75    3-88      4-78  (104)
 18 >3dzc_A UDP-N-acetylglucosamin  91.6    0.95 2.8E-05   25.4   7.1  115    1-117    23-148 (211)
 19 >1q0q_A 1-deoxy-D-xylulose 5-p  91.0    0.57 1.7E-05   26.9   5.5   57    2-61      8-66  (133)
 20 >3ezy_A Dehydrogenase; structu  90.1     1.2 3.5E-05   24.8   6.4   71    2-89      1-71  (173)
 21 >3beo_A UDP-N-acetylglucosamin  89.9     1.6 4.6E-05   23.9   7.1  117    2-119     7-134 (211)
 22 >3ec7_A Putative dehydrogenase  89.2     1.7 5.2E-05   23.5   7.9   72    3-89     23-94  (149)
 23 >3euw_A MYO-inositol dehydroge  89.2    0.96 2.8E-05   25.3   5.4   84    2-103     3-86  (125)
 24 >2fb9_A D-alanine:D-alanine li  89.2    0.88 2.6E-05   25.6   5.2   38    1-43      1-45  (88)
 25 >1v4v_A UDP-N-acetylglucosamin  88.4       2 5.9E-05   23.2   6.9  160    2-168     4-183 (204)
 26 >2i87_A D-alanine-D-alanine li  88.3    0.64 1.9E-05   26.6   4.0   42    1-44      1-49  (99)
 27 >3grf_A Ornithine carbamoyltra  88.1    0.59 1.8E-05   26.8   3.8  101    3-121     4-132 (135)
 28 >1e4e_A Vancomycin/teicoplanin  88.0    0.85 2.5E-05   25.7   4.5   40    1-42      1-47  (119)
 29 >1ehi_A LMDDL2, D-alanine:D-la  87.5     1.1 3.2E-05   25.0   4.8   42    1-43      1-49  (153)
 30 >3i12_A D-alanine-D-alanine li  86.5     1.2 3.7E-05   24.6   4.6   40    1-42      1-47  (110)
 31 >3e18_A Oxidoreductase; dehydr  86.4     1.5 4.5E-05   24.0   5.0   74    1-93      3-76  (125)
 32 >1mio_B Nitrogenase molybdenum  86.1     2.2 6.6E-05   22.8   5.8   82    3-95      3-89  (109)
 33 >1xea_A Oxidoreductase, GFO/ID  85.8     2.7   8E-05   22.2   6.9   69    2-89      1-70  (184)
 34 >2d13_A Hypothetical protein P  85.4     2.9 8.5E-05   22.1   7.7   81    1-88      2-96  (124)
 35 >2vt3_A REX, redox-sensing tra  84.4    0.86 2.6E-05   25.7   3.0   81    5-90      2-92  (130)
 36 >3bl5_A Queuosine biosynthesis  84.4     3.2 9.4E-05   21.8   8.3   58    1-63      1-66  (219)
 37 >1ydw_A AX110P-like protein; s  84.3     3.2 9.4E-05   21.8   6.3   74    2-89      5-78  (191)
 38 >2glx_A 1,5-anhydro-D-fructose  83.9     2.7   8E-05   22.2   5.4   71    4-91      1-71  (122)
 39 >2i6u_A Otcase, ornithine carb  83.8     3.3 9.8E-05   21.6   7.0  101    3-121     3-126 (129)
 40 >1pfk_A Phosphofructokinase; t  83.1     2.9 8.4E-05   22.1   5.2  106    2-113     1-126 (185)
 41 >1nvm_B Acetaldehyde dehydroge  82.7     3.7 0.00011   21.3   7.2   77    1-89      1-78  (158)
 42 >1kjq_A GART 2, phosphoribosyl  82.6     2.7   8E-05   22.2   4.9   92    4-113    12-103 (125)
 43 >1zh8_A Oxidoreductase; TM0312  81.3     4.1 0.00012   21.0   7.2   75    1-91     16-91  (143)
 44 >1jl3_A Arsenate reductase; al  81.0       2   6E-05   23.1   3.8   79    1-90      1-82  (139)
 45 >3cea_A MYO-inositol 2-dehydro  80.6     4.3 0.00013   20.8   7.4   72    3-90      8-79  (132)
 46 >3e5n_A D-alanine-D-alanine li  80.2       3 8.8E-05   22.0   4.5   40    1-42     20-66  (130)
 47 >1js1_X Transcarbamylase; alph  79.1       2 6.1E-05   23.1   3.3   25   94-121    93-117 (120)
 48 >2axq_A Saccharopine dehydroge  78.3     5.1 0.00015   20.4   5.8   75    1-89     21-95  (196)
 49 >1f06_A MESO-diaminopimelate D  78.1     5.2 0.00015   20.3   6.6   38    1-41      1-38  (154)
 50 >2oho_A Glutamate racemase; is  77.9       3 8.8E-05   22.0   3.9   99    2-119    11-113 (142)
 51 >3hdj_A Probable ornithine cyc  77.7     5.3 0.00016   20.2   6.1   86    3-104     3-89  (170)
 52 >1r0k_A 1-deoxy-D-xylulose 5-p  76.7     5.6 0.00017   20.0   7.1   59    1-60      1-60  (150)
 53 >1g63_A Epidermin modifying en  76.1     4.5 0.00013   20.7   4.4   37    2-40      1-39  (181)
 54 >1zuw_A Glutamate racemase 1;   75.7     4.7 0.00014   20.6   4.4   70    1-89      1-73  (160)
 55 >2dwc_A PH0318, 433AA long hyp  74.7     6.3 0.00019   19.7   5.9   83    3-103    19-101 (108)
 56 >2ef0_A Ornithine carbamoyltra  74.5     3.2 9.5E-05   21.7   3.3   26   94-121    91-116 (119)
 57 >2nvw_A Galactose/lactose meta  73.6     6.7  0.0002   19.5   6.5   76    3-90     39-116 (260)
 58 >1qgu_B Protein (nitrogenase m  73.2     6.8  0.0002   19.5   6.4   85    3-98     81-171 (240)
 59 >3hno_A Pyrophosphate-dependen  72.9     6.9 0.00021   19.4   4.9   85    1-90      1-112 (211)
 60 >2ho3_A Oxidoreductase, GFO/ID  72.7       7 0.00021   19.4   4.9   69    4-90      2-70  (123)
 61 >1tlt_A Putative oxidoreductas  72.2     7.2 0.00021   19.3   6.0   53    1-57      3-56  (184)
 62 >3btv_A Galactose/lactose meta  72.1     7.2 0.00021   19.3   5.6   76    2-89     19-96  (234)
 63 >1mio_A Nitrogenase molybdenum  72.1     2.1 6.3E-05   23.0   1.9   81    4-95     97-177 (294)
 64 >2p2s_A Putative oxidoreductas  71.9     7.3 0.00022   19.3   6.3   71    3-90      4-74  (127)
 65 >3i23_A Oxidoreductase, GFO/ID  70.7     7.7 0.00023   19.1   7.4   71    3-91      2-74  (125)
 66 >2q8n_A Glucose-6-phosphate is  70.5     5.8 0.00017   20.0   3.9   13  106-118   142-154 (170)
 67 >2dt5_A AT-rich DNA-binding pr  70.5     2.2 6.6E-05   22.8   1.7   68    3-89      3-70  (111)
 68 >1vb5_A Translation initiation  69.5     8.2 0.00024   18.9   9.2   58    3-62    108-169 (276)
 69 >2c5s_A THII, probable thiamin  69.1     8.4 0.00025   18.9   5.0   56    3-62      5-68  (231)
 70 >2czc_A Glyceraldehyde-3-phosp  69.0     8.4 0.00025   18.8   7.4   54    2-59      1-54  (174)
 71 >2ph5_A Homospermidine synthas  68.5     2.3 6.9E-05   22.7   1.5  150    2-168    12-175 (214)
 72 >1pvv_A Otcase, ornithine carb  67.9     8.3 0.00025   18.9   4.2   99    3-121     3-125 (128)
 73 >2jfq_A Glutamate racemase; ce  67.8     8.9 0.00026   18.7   5.2   70    1-89     20-91  (174)
 74 >1jf8_A Arsenate reductase; pt  66.5     7.4 0.00022   19.2   3.7   57    1-57      1-60  (131)
 75 >2ixa_A Alpha-N-acetylgalactos  66.4     9.5 0.00028   18.5   7.4   80    1-90     18-99  (231)
 76 >2yrx_A Phosphoribosylglycinam  66.3     7.7 0.00023   19.1   3.8   82    2-101    20-101 (379)
 77 >3gd5_A Otcase, ornithine carb  66.2     9.5 0.00028   18.5   7.2   99    3-121     3-125 (128)
 78 >1ebf_A Homoserine dehydrogena  66.0     7.4 0.00022   19.2   3.6  128    1-143     2-144 (166)
 79 >3kd9_A Coenzyme A disulfide r  65.8     9.7 0.00029   18.4   4.3   36    1-41      1-38  (183)
 80 >1vlv_A Otcase, ornithine carb  65.5     9.8 0.00029   18.4   5.4  101    3-121     3-127 (130)
 81 >1p3y_1 MRSD protein; flavopro  65.1     9.4 0.00028   18.5   4.0   36    2-39      7-44  (194)
 82 >3ego_A Probable 2-dehydropant  64.6     2.9 8.5E-05   22.1   1.3   31    2-38      1-32  (172)
 83 >2z2v_A Hypothetical protein P  64.6     1.1 3.4E-05   24.8  -0.8   36    2-40     15-50  (365)
 84 >1tvc_A Methane monooxygenase   63.8      11 0.00031   18.2   5.1   41    2-42      3-44  (137)
 85 >2qcu_A Aerobic glycerol-3-pho  62.5     9.1 0.00027   18.6   3.6   51    1-58      1-61  (171)
 86 >2pvp_A D-alanine-D-alanine li  62.5      11 0.00033   18.0   5.3   36    1-40     18-60  (139)
 87 >1q15_A CARA; CMPR, (2S,5S)-5-  62.3      11 0.00033   18.0   5.4   56    3-63      2-63  (223)
 88 >1zzg_A Glucose-6-phosphate is  62.1      11 0.00033   18.0   3.9   15  105-119   133-147 (162)
 89 >2vxo_A GMP synthase [glutamin  61.3      12 0.00034   17.9   7.0   57    3-62     23-87  (229)
 90 >1iow_A DD-ligase, DDLB, D-ALA  61.0      12 0.00035   17.8   4.9   33    2-36      1-40  (100)
 91 >1e9y_B Urease beta subunit; h  60.9      12 0.00035   17.8   4.9   89    3-99     59-169 (379)
 92 >1duv_G Octase-1, ornithine tr  60.7      12 0.00035   17.8   3.9   99    3-119     3-126 (126)
 93 >2jjm_A Glycosyl transferase,   60.0     3.1 9.3E-05   21.8   0.8  132    2-135    14-161 (216)
 94 >1m1n_A Nitrogenase molybdenum  59.6      12 0.00037   17.7   5.8  104    4-122   105-213 (248)
 95 >3iwa_A FAD-dependent pyridine  59.3      13 0.00037   17.6   4.1   36    1-41      1-38  (209)
 96 >3k32_A Uncharacterized protei  58.8      13 0.00038   17.6   7.0   56    3-63      6-67  (203)
 97 >2dpl_A GMP synthetase, GMP sy  58.2      13 0.00039   17.5   4.7   56    3-62     20-84  (189)
 98 >3fiu_A NH(3)-dependent NAD(+)  58.2      13 0.00039   17.5   6.5   57    2-63     28-92  (249)
 99 >2q3e_A UDP-glucose 6-dehydrog  58.1      13 0.00039   17.5   4.3   51    1-57      2-54  (213)
100 >1geg_A Acetoin reductase; SDR  57.7      13 0.00039   17.5   5.2   87    1-93      1-91  (256)
101 >2pfs_A USP, universal stress   57.6      13  0.0004   17.5   3.9   89    1-93      4-120 (150)
102 >2hk9_A Shikimate dehydrogenas  57.4      13  0.0004   17.4   4.3   48    1-54      1-48  (115)
103 >2owr_A UDG, uracil-DNA glycos  57.3     2.6 7.6E-05   22.4   0.0   50   68-121    91-142 (171)
104 >2vsy_A XCC0866; transferase,   57.0      14  0.0004   17.4   6.4  114    3-142     7-129 (191)
105 >1pea_A Amidase operon; gene r  56.6      14 0.00041   17.3   5.9   74   18-93      3-82  (179)
106 >3gdo_A Uncharacterized oxidor  56.0      14 0.00042   17.3   6.0   70    2-90      4-73  (126)
107 >3ff1_A Glucose-6-phosphate is  55.6      13 0.00039   17.5   3.4  114    5-119    29-158 (173)
108 >1efv_A Electron transfer flav  54.7      13 0.00039   17.5   3.3   80   44-123    32-113 (132)
109 >2w37_A Ornithine carbamoyltra  54.1      15 0.00045   17.1   5.7  104    3-124     3-131 (159)
110 >3c7a_A Octopine dehydrogenase  53.4      16 0.00046   17.0   4.2   31    2-36      1-32  (204)
111 >2yv1_A Succinyl-COA ligase [A  53.2      12 0.00034   17.9   2.8   65    3-90     13-78  (128)
112 >1bg6_A N-(1-D-carboxylethyl)-  53.2      16 0.00046   17.0   5.0   31    1-36      1-33  (195)
113 >1xng_A NH(3)-dependent NAD(+)  53.1      16 0.00046   17.0   6.1   58    2-63     24-89  (132)
114 >2gzm_A Glutamate racemase; en  53.0      16 0.00047   17.0   4.9   69    2-89      2-72  (156)
115 >2q7x_A UPF0052 protein SP_156  52.7      16 0.00047   16.9   4.4   80    3-97      4-86  (210)
116 >1vjt_A Alpha-glucosidase; TM0  52.7     9.4 0.00028   18.5   2.3   39    1-39      9-50  (265)
117 >1h6d_A Precursor form of gluc  52.6      16 0.00047   16.9   7.2   76    2-90     82-158 (210)
118 >2ez9_A Pyruvate oxidase; TPP   51.6      17 0.00049   16.8   3.8  102   14-117    11-126 (229)
119 >2vvt_A Glutamate racemase; is  51.5      17 0.00049   16.8   4.5   68    3-89     24-93  (179)
120 >3c48_A Predicted glycosyltran  51.3      16 0.00047   17.0   3.3  111    3-115    20-157 (250)
121 >1vgw_A 4-diphosphocytidyl-2C-  51.1      17  0.0005   16.8   4.7   38    4-42      7-61  (231)
122 >3hft_A WBMS, polysaccharide d  50.6     9.4 0.00028   18.5   2.0   49   10-58    100-148 (257)
123 >1qv9_A F420-dependent methyle  50.5     3.5  0.0001   21.5  -0.2   32   30-61     64-99  (127)
124 >3f4l_A Putative oxidoreductas  50.3      17 0.00051   16.7   6.4   71    4-91      3-74  (125)
125 >1ps9_A 2,4-dienoyl-COA reduct  50.2      17 0.00051   16.7   4.9  124    1-143    10-135 (159)
126 >2ywb_A GMP synthase [glutamin  50.2      17 0.00051   16.7   7.1   57    2-63     20-84  (194)
127 >3dla_A Glutamine-dependent NA  49.5      18 0.00053   16.6   4.4   61    3-63     39-109 (231)
128 >3csu_A Protein (aspartate car  49.1      18 0.00053   16.6   9.1   98    3-118     3-119 (134)
129 >1gso_A Protein (glycinamide r  48.9     6.1 0.00018   19.8   0.8   81    4-100     3-83  (359)
130 >2i6g_A Putative methyltransfe  48.7      18 0.00054   16.5   4.2   79    4-99     33-113 (199)
131 >3hsk_A Aspartate-semialdehyde  48.6      18 0.00054   16.5   4.3   41    1-43     17-57  (190)
132 >3fef_A Putative glucosidase L  48.4      19 0.00055   16.5   4.6   35    1-36      3-39  (241)
133 >3fci_A UDG, uracil-DNA glycos  47.8     7.5 0.00022   19.2   1.1   53   68-121   142-197 (223)
134 >2gek_A Phosphatidylinositol m  47.6      14  0.0004   17.4   2.4  114    3-119    20-146 (237)
135 >3hn2_A 2-dehydropantoate 2-re  47.6      19 0.00056   16.4   5.1   30    2-36      1-31  (177)
136 >3a2k_A TRNA(Ile)-lysidine syn  47.5      19 0.00057   16.4   6.1   60    3-63     18-88  (215)
137 >3bio_A Oxidoreductase, GFO/ID  46.8      20 0.00058   16.3   5.4   38    1-41      6-44  (158)
138 >3eya_A Pyruvate dehydrogenase  46.6      20 0.00058   16.3   3.6   97   12-116    12-125 (180)
139 >3fni_A Putative diflavin flav  46.4      20 0.00059   16.3   4.3   16    1-16      2-18  (159)
140 >1ni5_A Putative cell cycle pr  45.8      20  0.0006   16.2   8.2   61    3-63     13-83  (234)
141 >1b7g_O Protein (glyceraldehyd  45.4      21 0.00061   16.2   7.8   54    4-61      2-55  (176)
142 >1wy5_A TILS, hypothetical UPF  45.3      21 0.00061   16.2   7.0   61    3-63     24-94  (217)
143 >1ddg_A Sulfite reductase (NAD  44.8      21 0.00062   16.1   3.6   39    3-41      5-44  (152)
144 >1gvh_A Flavohemoprotein; oxid  44.3      21 0.00063   16.1   4.0   39    3-41      6-45  (143)
145 >1obb_A Maltase, alpha-glucosi  44.1      21 0.00063   16.0   3.4   39    1-39      1-41  (371)
146 >3b3f_A Histone-arginine methy  44.1      21 0.00063   16.0   3.5   93    4-116    48-143 (149)
147 >1zq6_A Otcase, ornithine carb  43.7      11 0.00034   17.9   1.6   99    4-121     8-134 (137)
148 >2jfz_A Glutamate racemase; ce  43.5      22 0.00065   16.0   5.6   67    4-89      1-69  (139)
149 >2dwu_A Glutamate racemase; is  43.4      22 0.00065   16.0   4.7   68    3-89      7-76  (164)
150 >3hl0_A Maleylacetate reductas  43.3      22 0.00065   16.0   5.9   83    3-95     12-100 (159)
151 >1vkf_A Glycerol uptake operon  43.2      22 0.00065   15.9   6.7   93    4-105    32-149 (188)
152 >1o2d_A Alcohol dehydrogenase,  43.2      22 0.00066   15.9   6.7   81   12-95     25-111 (188)
153 >3hww_A 2-succinyl-5-enolpyruv  43.1      22 0.00066   15.9   3.4   10  156-165   191-200 (213)
154 >2zhx_A UDG, uracil-DNA glycos  43.1      11 0.00033   18.0   1.5   53   68-121   157-212 (238)
155 >1b73_A Glutamate racemase; is  43.0      22 0.00066   15.9   5.7   67    4-89      1-69  (135)
156 >3lop_A Substrate binding peri  42.9      22 0.00066   15.9   4.4   73   17-92      7-84  (162)
157 >3pfk_A Phosphofructokinase; t  42.6      23 0.00067   15.9   4.6  103    4-112     2-124 (186)
158 >2ejb_A Probable aromatic acid  42.3      23 0.00067   15.9   3.8   34    4-39      2-37  (189)
159 >1zxx_A 6-phosphofructokinase;  42.2      23 0.00068   15.8   5.0  101    4-110     2-122 (182)
160 >3fhl_A Putative oxidoreductas  42.1      23 0.00068   15.8   3.7   68    1-89      3-72  (126)
161 >1gpm_A GMP synthetase, XMP am  41.9      23 0.00068   15.8   5.4   57    2-62     22-87  (200)
162 >1m1n_B Nitrogenase molybdenum  41.9      23 0.00069   15.8   7.2   81    4-95     57-143 (215)
163 >4ubp_C Protein (urease (chain  41.2      24  0.0007   15.7   4.8   89    3-99     59-169 (379)
164 >3ist_A Glutamate racemase; st  40.7      24 0.00071   15.7   4.4   69    2-89      4-74  (157)
165 >1cf2_P Protein (glyceraldehyd  40.5      24 0.00072   15.7   7.1   52    4-59      2-53  (174)
166 >2uz1_A Benzaldehyde lyase; th  39.9      16 0.00047   16.9   1.8   11   48-58    140-150 (196)
167 >2i99_A MU-crystallin homolog;  39.9      25 0.00073   15.6   5.4   53    2-58      1-53  (160)
168 >2hmt_A YUAA protein; RCK, KTN  39.9      25 0.00073   15.6   5.7   74    1-89      4-77  (144)
169 >2j8x_A Uracil-DNA glycosylase  39.9      17 0.00051   16.7   2.0   95   15-117    42-148 (184)
170 >3gg2_A Sugar dehydrogenase, U  39.8      25 0.00073   15.6   3.0   33    2-41      1-34  (171)
171 >1ff9_A Saccharopine reductase  39.8      25 0.00073   15.6   4.3   31    1-35      1-31  (175)
172 >1t9b_A Acetolactate synthase,  39.7      25 0.00074   15.6   3.0   12    4-15     76-87  (192)
173 >2qk4_A Trifunctional purine b  39.4      12 0.00035   17.9   1.1   71    3-89     24-95  (120)
174 >4eug_A UDG, UNG, protein (gly  39.3      11 0.00032   18.1   0.9   98   16-121    44-153 (185)
175 >3lp8_A Phosphoribosylamine-gl  39.2      24 0.00072   15.7   2.7   26    1-28     19-44  (351)
176 >3cmu_A Protein RECA, recombin  38.7      26 0.00076   15.5   4.8   80   11-95     36-118 (281)
177 >3ip3_A Oxidoreductase, putati  37.7      23 0.00068   15.8   2.4   72    3-90      2-75  (129)
178 >1vi2_A Shikimate 5-dehydrogen  37.6      27 0.00079   15.4   3.7   33    3-38      3-35  (135)
179 >1fdr_A Flavodoxin reductase;   37.6      27 0.00079   15.4   4.0   41    3-43      7-48  (149)
180 >3e82_A Putative oxidoreductas  37.6      27 0.00079   15.4   6.0   69    3-91      7-76  (127)
181 >2o8v_A Phosphoadenosine phosp  37.4      27  0.0008   15.3   5.5   55    3-62     45-107 (252)
182 >2yv2_A Succinyl-COA synthetas  37.3      27  0.0008   15.3   2.8   65    3-89     13-78  (129)
183 >1ml4_A Aspartate transcarbamo  36.7      28 0.00082   15.3   7.5   98    3-118     3-119 (124)
184 >2p0y_A Hypothetical protein L  36.6      28 0.00082   15.3   3.9   32    3-38     10-41  (341)
185 >1b0z_A Protein (phosphoglucos  35.7      29 0.00085   15.2   3.9   48    7-54     30-84  (174)
186 >2yxe_A Protein-L-isoaspartate  34.9      29 0.00087   15.1   5.1   86    4-104    79-168 (215)
187 >1zun_A Sulfate adenylyltransf  34.1      30  0.0009   15.0   5.5   57    4-62     47-112 (325)
188 >2boo_A UDG, uracil-DNA glycos  33.8      19 0.00056   16.4   1.4   57   68-125   161-222 (247)
189 >1pg5_A Aspartate carbamoyltra  33.7      31 0.00091   15.0   7.8   97    3-119     4-119 (123)
190 >1vpa_A 2-C-methyl-D-erythrito  33.7      31 0.00091   15.0   7.4   39    1-40     11-66  (234)
191 >1vgv_A UDP-N-acetylglucosamin  33.3      31 0.00092   14.9   7.1  188    4-197     1-208 (213)
192 >3i45_A Twin-arginine transloc  33.3      31 0.00092   14.9   4.8   35    4-38     19-56  (200)
193 >3cmu_A Protein RECA, recombin  33.0      32 0.00093   14.9   4.8   75   11-90     36-113 (278)
194 >2o2z_A Hypothetical protein;   32.9      32 0.00094   14.9   5.7   32    3-38      4-35  (323)
195 >1efp_A ETF, protein (electron  32.8      32 0.00094   14.9   2.9   74   44-119    31-108 (128)
196 >1ybh_A Acetolactate synthase,  32.5      24  0.0007   15.7   1.7   70   17-91      6-89  (174)
197 >2rgw_A Aspartate carbamoyltra  32.3      32 0.00096   14.8   8.6   96    3-118     4-119 (134)
198 >3k89_A Malonyl COA-ACP transa  32.1      21 0.00063   16.1   1.5   16    1-16      1-16  (241)
199 >3d6n_B Aspartate carbamoyltra  31.9      28 0.00083   15.2   2.0   21  101-123   115-135 (147)
200 >2q1s_A Putative nucleotide su  31.8      33 0.00098   14.7   3.4   34    1-37     30-63  (363)
201 >3cmw_A Protein RECA, recombin  31.6      33 0.00098   14.7   5.3   80   11-95     36-118 (279)
202 >2ppv_A Uncharacterized protei  31.5      33 0.00099   14.7   5.4   32    3-38      4-35  (332)
203 >1ws6_A Methyltransferase; str  31.5      33 0.00099   14.7   3.8   81    4-99     43-128 (171)
204 >2dc1_A L-aspartate dehydrogen  31.2      34   0.001   14.7   7.5   34    4-41      1-34  (133)
205 >1f0y_A HCDH, L-3-hydroxyacyl-  30.8      34   0.001   14.6   3.1   30  146-175   159-188 (204)
206 >1p3d_A UDP-N-acetylmuramate--  30.8      34   0.001   14.6   7.8   51    3-58     18-68  (116)
207 >1jgt_A Beta-lactam synthetase  30.7      34   0.001   14.6   3.2   55    3-62     28-88  (300)
208 >2q28_A Oxalyl-COA decarboxyla  30.7      28 0.00082   15.3   1.8   74   15-92      8-89  (177)
209 >3cmu_A Protein RECA, recombin  30.7      34   0.001   14.6   4.8   75   11-90     36-113 (278)
210 >2bgi_A Ferredoxin-NADP(H) red  30.5      35   0.001   14.6   3.0   41    3-43      8-49  (160)
211 >3k96_A Glycerol-3-phosphate d  30.4      35   0.001   14.6   4.8   48    1-56     27-75  (204)
212 >2e18_A NH(3)-dependent NAD(+)  29.7      36  0.0011   14.5   5.6   59    3-64     22-86  (129)
213 >1qzu_A Hypothetical protein M  29.6      36  0.0011   14.5   4.2   37    3-40     19-57  (206)
214 >1oi7_A Succinyl-COA synthetas  29.4      34   0.001   14.7   2.1   65    3-90      7-72  (122)
215 >2hma_A Probable tRNA (5-methy  29.2      36  0.0011   14.5   7.2   55    3-62      9-79  (199)
216 >2pia_A Phthalate dioxygenase   29.2      36  0.0011   14.5   5.0   88    4-102     4-99  (121)
217 >2pq6_A UDP-glucuronosyl/UDP-g  28.9      37  0.0011   14.4   5.0   19  155-173   251-269 (276)
218 >1krh_A Benzoate 1,2-dioxygena  28.7      37  0.0011   14.4   8.2   40    3-42      5-45  (133)
219 >2ozp_A N-acetyl-gamma-glutamy  28.1      38  0.0011   14.3   5.0   39    1-41      1-40  (176)
220 >2vbi_A Pyruvate decarboxylase  28.1      26 0.00077   15.5   1.3   20  149-170   175-194 (218)
221 >3c1a_A Putative oxidoreductas  28.0      38  0.0011   14.3   4.2  120    3-151    10-135 (170)
222 >3llv_A Exopolyphosphatase-rel  28.0      38  0.0011   14.3   7.7   73    2-89      5-77  (141)
223 >2fp4_A Succinyl-COA ligase [G  27.8      37  0.0011   14.4   2.0   65    3-89     14-78  (130)
224 >3fbt_A Chorismate mutase and   27.5      39  0.0011   14.3   4.1   46    1-51      1-46  (117)
225 >1zmo_A Halohydrin dehalogenas  27.3      39  0.0012   14.2   4.6   82    7-93      3-90  (244)
226 >1uc8_A LYSX, lysine biosynthe  27.1      37  0.0011   14.4   2.0   74   35-113     3-82  (99)
227 >3cmw_A Protein RECA, recombin  26.5      40  0.0012   14.1   5.3   75   11-90     32-109 (274)
228 >1mvl_A PPC decarboxylase atha  26.2      41  0.0012   14.1   4.8   35    3-40     19-55  (209)
229 >3hut_A Putative branched-chai  26.0      41  0.0012   14.1   5.6   72   18-92      5-81  (119)
230 >2i2x_B MTAC, methyltransferas  25.6      42  0.0012   14.0   8.0   99    2-104     4-105 (140)
231 >1tq8_A Hypothetical protein R  25.2      43  0.0013   14.0   7.6   83    3-89     17-126 (128)
232 >3fwz_A Inner membrane protein  25.1      43  0.0013   14.0   8.1   74    1-89      5-78  (140)
233 >2v0h_A Bifunctional protein G  25.0      34   0.001   14.7   1.5   39    1-40      1-58  (223)
234 >1w55_A ISPD/ISPF bifunctional  24.9      37  0.0011   14.4   1.6   39    1-40      1-56  (197)
235 >1rrm_A Lactaldehyde reductase  24.6      44  0.0013   13.9   5.4   79   12-95     15-101 (183)
236 >3k8d_A 3-deoxy-manno-octuloso  24.5      44  0.0013   13.9   6.0   37    1-38     14-66  (264)
237 >2f8n_G Core histone macro-H2A  24.5      25 0.00073   15.6   0.7   17  104-120   102-119 (120)
238 >1pzg_A LDH, lactate dehydroge  24.5      44  0.0013   13.9   4.2   40    3-45      9-48  (331)
239 >1qfj_A Protein (flavin reduct  24.3      44  0.0013   13.9   8.1   39    3-41      6-45  (136)
240 >1ybh_A Acetolactate synthase,  24.2      44  0.0013   13.9   3.5   35    5-42     73-110 (218)
241 >3eyw_A C-terminal domain of g  24.0      45  0.0013   13.8   6.9   73    2-89      3-75  (123)
242 >1ys4_A Aspartate-semialdehyde  23.9      45  0.0013   13.8   5.9   39    1-41      6-44  (173)
243 >1udg_A Uracil-DNA glycosylase  23.8      24 0.00072   15.7   0.5  103   16-126    43-158 (175)
244 >3cxm_A Uracil-DNA glycosylase  23.6      22 0.00067   15.9   0.3   98   16-121    43-154 (186)
245 >1ko7_A HPR kinase/phosphatase  23.6      45  0.0013   13.8   3.2   29   34-62     83-113 (129)
246 >2qdx_A Ferredoxin reductase;   23.6      31 0.00091   15.0   1.0   40    3-42      7-47  (158)
247 >2cwd_A Low molecular weight p  23.6      46  0.0013   13.8   3.9   59    1-59      1-72  (161)
248 >2z1m_A GDP-D-mannose dehydrat  23.6      46  0.0014   13.8   6.6   81    1-89      1-82  (178)
249 >3hhd_A Fatty acid synthase; t  23.6      44  0.0013   13.9   1.8   14    3-16      2-15  (164)
250 >1x7d_A Ornithine cyclodeamina  23.5      46  0.0014   13.8   5.3   76    2-89      2-77  (169)
251 >1tzy_A Histone H2A-IV; histon  23.4      26 0.00077   15.5   0.6   17  107-123   109-125 (129)
252 >2nqb_C Histone H2A; nucleosom  23.4      27 0.00079   15.4   0.7   15  107-121   107-121 (123)
253 >2der_A TRNA-specific 2-thiour  23.2      46  0.0014   13.7   3.3   55    3-62     17-87  (207)
254 >1ozh_A ALS, acetolactate synt  23.2      46  0.0014   13.7   4.0   34    5-41     73-109 (200)
255 >3cf4_G Acetyl-COA decarbonyla  23.2      46  0.0014   13.7   1.9   99   16-119    23-148 (170)
256 >3eua_A Putative fructose-amin  23.1      46  0.0014   13.7   5.3   33   30-62     74-110 (155)
257 >2rir_A Dipicolinate synthase,  23.1      46  0.0014   13.7   8.8   88    2-110    29-118 (144)
258 >1tzf_A Glucose-1-phosphate cy  23.1      46  0.0014   13.7   2.1   18    2-19      1-18  (231)
259 >3hba_A Putative phosphosugar   23.1      47  0.0014   13.7   4.3   33   30-62     49-85  (106)
260 >2cfc_A 2-(R)-hydroxypropyl-CO  23.0      47  0.0014   13.7   4.3   80    1-88      1-86  (250)
261 >3lft_A Uncharacterized protei  22.8      47  0.0014   13.7   6.6   65    3-91      2-71  (148)
262 >1o0s_A NAD-ME, NAD-dependent   22.8      22 0.00066   15.9   0.2   31   73-103   115-146 (300)
263 >3k9w_A Phosphopantetheine ade  22.7      30 0.00089   15.0   0.8   36    2-41      3-44  (127)
264 >2fqx_A Membrane lipoprotein T  22.6      48  0.0014   13.6   3.0   45   44-92     27-72  (147)
265 >1mjh_A Protein (ATP-binding d  22.5      48  0.0014   13.6   6.8   85    1-90      3-128 (162)
266 >2hg4_A DEBS, 6-deoxyerythrono  22.3      48  0.0014   13.7   1.8   19  156-174   196-214 (232)
267 >1x3l_A Hypothetical protein P  22.3      42  0.0012   14.0   1.5   71    3-84     26-100 (244)
268 >2cu2_A Putative mannose-1-pho  22.2      31 0.00092   14.9   0.8   19    2-20      1-19  (263)
269 >3d1l_A Putative NADP oxidored  22.1      49  0.0014   13.6   4.8   51    1-57      8-59  (167)
270 >3elb_A Ethanolamine-phosphate  22.1      15 0.00044   17.1  -0.8   20   69-88     78-97  (127)
271 >1vlj_A NADH-dependent butanol  22.0      49  0.0014   13.6   6.2   79   12-95     27-114 (193)
272 >2b8n_A Glycerate kinase, puta  22.0      43  0.0013   13.9   1.5   74    3-84     15-92  (227)
273 >2vz8_A Fatty acid synthase; t  21.9      49  0.0015   13.6   1.9   15    2-16      1-15  (166)
274 >3dty_A Oxidoreductase, GFO/ID  21.8      49  0.0015   13.5   6.7   80    1-89      9-92  (226)
275 >1fxo_A Glucose-1-phosphate th  21.3      35   0.001   14.6   0.9   18    2-19      1-18  (293)
276 >2vch_A Hydroquinone glucosylt  21.3      50  0.0015   13.5   4.2   25   34-58    112-136 (276)
277 >2j8z_A Quinone oxidoreductase  21.2      51  0.0015   13.5   5.9   78    8-95      8-86  (131)
278 >2ewd_A Lactate dehydrogenase,  21.0      51  0.0015   13.4   4.4   37    1-40      1-38  (317)
279 >1hm9_A GLMU, UDP-N-acetylgluc  20.8      49  0.0014   13.6   1.6   37    1-38      9-62  (232)
280 >2pg3_A Queuosine biosynthesis  20.8      52  0.0015   13.4   7.7   55    3-62      2-64  (162)
281 >2c31_A Oxalyl-COA decarboxyla  20.7      52  0.0015   13.4   2.1   75   15-92      8-89  (179)
282 >3ksm_A ABC-type sugar transpo  20.6      52  0.0015   13.4   2.3   15  115-129   106-120 (140)
283 >1m3s_A Hypothetical protein Y  20.5      52  0.0015   13.4   4.6   30   32-61     81-114 (186)
284 >3eag_A UDP-N-acetylmuramate:L  20.4      52  0.0016   13.4   8.1   69    3-89      4-73  (105)
285 >1di6_A MOGA, molybdenum cofac  20.3      53  0.0016   13.3   3.2   13    1-13      1-13  (195)
286 >2ew2_A 2-dehydropantoate 2-re  20.2      53  0.0016   13.3   4.3   32    2-38      2-34  (182)

No 1  
>>3lou_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia mallei} (A:94-292)
Probab=100.00  E-value=2.5e-41  Score=305.24  Aligned_cols=198  Identities=25%  Similarity=0.351  Sum_probs=183.1

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             86659999769850189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      .|+|||||+||.|+||++|+++.+.+..+++|++|+|++++...  ++...++|....... ...+..++.++.+.++++
T Consensus         1 ~~~ki~~~gs~~~~~l~~ll~~~~~~~~~~~i~~vvt~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~   77 (199)
T 3lou_A            1 ARPKVLIXVSKLEHCLADLLFRWKXGELKXDIVGIVSNHPDFAP--LAAQHGLPFRHFPIT-ADTKAQQEAQWLDVFETS   77 (199)
T ss_dssp             SCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSSTTHH--HHHHTTCCEEECCCC-SSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHH--HHHHHCCCEEEEECC-CCCHHHHHHHHHHHHHHC
T ss_conf             78459999769983699999998779987489999548957599--998626998999568-885678999999999754


Q ss_pred             CCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCC
Q ss_conf             43036431122205721321066542313532233324442121000024653445303312321866267789987189
Q gi|254780570|r   82 QPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSS  161 (205)
Q Consensus        82 ~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~  161 (205)
                      +||++|++||++++|+++++.++.++||+|||+||.|||.+|++||+.||++++|+|+|+|++++|+|+|+.|+.+||.+
T Consensus        78 ~~D~iv~~~~~~ilp~~il~~~~~~~iN~HpslLP~yRG~~p~~wai~~g~~~~GvTih~i~~~~D~G~Ii~q~~~~i~~  157 (199)
T 3lou_A           78 GAELVILARYXQVLSPEASARLANRAINIHHSFLPGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQVVERVDH  157 (199)
T ss_dssp             TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEECSSCCCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCT
T ss_pred             CCCEEEEECCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEEEEEECCC
T ss_conf             98199980126707899997314781896555376788930999999839987778899996888788806899986599


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEE
Q ss_conf             98999999999999999999999999869569989869995
Q gi|254780570|r  162 QDTESSLSQKVLSAEHLLYPLALKYTILGKTSNSNDHHHLI  202 (205)
Q Consensus       162 ~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~~~~~~  202 (205)
                      +||+++|+.|+..++.++++++++.+++|++....+++.+.
T Consensus       158 ~dt~~~l~~~~~~~~~~l~~~~i~~l~~g~~~~~pQ~~~~~  198 (199)
T 3lou_A          158 SYRPEQLLAVGRDVECITLARAVKAFIERRVFLNGDRTVVF  198 (199)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEE
T ss_conf             99999999999999999999999999809989849988996


No 2  
>>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} (A:)
Probab=100.00  E-value=5.5e-41  Score=302.86  Aligned_cols=198  Identities=39%  Similarity=0.706  Sum_probs=188.7

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             65999976985018999999973999847999997688887888998608950463013233221012432100012343
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP   83 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~   83 (205)
                      +||++|+||+|+||++|++++..+..+++|++|+||++++.+..++....++....+...+...+.++.++.+.++++++
T Consensus         1 mkI~~~gs~~~~~l~~ll~~~~~~~~~~~i~~v~t~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~   80 (212)
T 1jkx_A            1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAP   80 (212)
T ss_dssp             CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGCC
T ss_pred             CEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             97999982684789999998870999988999997898627788877505650565123579988999999999997099


Q ss_pred             EEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCC
Q ss_conf             03643112220572132106654231353223332444212100002465344530331232186626778998718998
Q gi|254780570|r   84 DLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQD  163 (205)
Q Consensus        84 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~d  163 (205)
                      |++|+++|++++|+++++.+++++||+|||+||.|||.+|++||+.||++++|+|+|+|++++|+||||.|++++|.++|
T Consensus        81 D~iv~~~~~~il~~~il~~~~~~~iN~HpslLP~yRG~~p~~wai~~g~~~~G~T~h~~~~~iD~G~Ii~q~~~~i~~~~  160 (212)
T 1jkx_A           81 DVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD  160 (212)
T ss_dssp             SEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTSCCSSCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTC
T ss_pred             CEEEEECHHHHCCHHHHHHHCCCEEECCCCHHCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCC
T ss_conf             99998152455799998655589378475000137788859999987998668469986678757985899998659999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEE
Q ss_conf             99999999999999999999999986956998986999
Q gi|254780570|r  164 TESSLSQKVLSAEHLLYPLALKYTILGKTSNSNDHHHL  201 (205)
Q Consensus       164 ~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~~~~~  201 (205)
                      |..+|+.|+..++.++++++++.+++|++...+.++..
T Consensus       161 t~~~l~~~~~~~~~~l~~~~i~~l~~~~~~q~~~~~~y  198 (212)
T 1jkx_A          161 SEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWL  198 (212)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEE
T ss_conf             99999999999999999999999980997884998899


No 3  
>>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus} (A:)
Probab=100.00  E-value=6.2e-41  Score=302.48  Aligned_cols=198  Identities=34%  Similarity=0.622  Sum_probs=188.1

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      .+||+||+||+|+++.++++++.++..+++|++|+|+++++.+..++...+++....+...+..+...+.++.+.+++++
T Consensus         1 ~Mki~~~~sg~~~~~~~~l~~l~~~~~~~~iv~vvt~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~   80 (216)
T 2ywr_A            1 XLKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFPSKKEFEERXALELKKKG   80 (216)
T ss_dssp             CEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             95899998179567999999987399997799999758875213312146861267514332103343299999998519


Q ss_pred             CEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCC
Q ss_conf             30364311222057213210665423135322333244421210000246534453033123218662677899871899
Q gi|254780570|r   83 PDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQ  162 (205)
Q Consensus        83 ~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~  162 (205)
                      +|+++++||++|+|+++++.+++++||+|||+||+|||++|++||+.||++++|+|+|+|++++|+|+|+.|++++|.++
T Consensus        81 ~Dl~i~~~~~~il~~~~l~~~~~g~iN~HpslLP~yRG~~p~~wai~ng~~~~G~Tih~~~~~~D~G~Ii~q~~~~i~~~  160 (216)
T 2ywr_A           81 VELVVLAGFXRILSHNFLKYFPNKVINIHPSLIPAFQGLHAQKQAVEFGVKFSGCTVHIVDESVDAGPVIVQAVVPVLPE  160 (216)
T ss_dssp             CCEEEESSCCSCCCHHHHTTSTTCEEEEESSCTTTTCSTTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTT
T ss_pred             CCEEEEEHHHHHCCHHHHHHHCCCEEECCCCCCHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEEECCC
T ss_conf             96887222256558888754148758746657133411221345776077220524799604458862125689983899


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEE
Q ss_conf             89999999999999999999999998695699898699
Q gi|254780570|r  163 DTESSLSQKVLSAEHLLYPLALKYTILGKTSNSNDHHH  200 (205)
Q Consensus       163 d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~~~~  200 (205)
                      ||+.+|..|+..++.+++.++++.+++|++...+.+..
T Consensus       161 dt~~~l~~k~~~~~~~ll~~~l~~~~~~~~~~~~~~~~  198 (216)
T 2ywr_A          161 DDENTLADRILKWEHKILPQTVQWFAQDRIIIDGRKVI  198 (216)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEE
T ss_conf             99999999999999999999999998199899699987


No 4  
>>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural genomics center for infectious disease; 2.20A {Anaplasma phagocytophilum HZ} (A:)
Probab=100.00  E-value=1.3e-40  Score=300.27  Aligned_cols=193  Identities=39%  Similarity=0.656  Sum_probs=180.7

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      ++||++|+|+++||+..+++++.++....+++.++++++++.....|++++||.+..+..     ...+.++.+.+.+.+
T Consensus         8 ~~ki~~~gs~~~s~~~~~l~~l~~~~~~~~iv~~~~~~~~~~~~~~a~~~~i~~~~~~~~-----~~~~~~~~~~l~~~~   82 (215)
T 3kcq_A            8 ELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRK-----PLDIEHISTVLREHD   82 (215)
T ss_dssp             CEEEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBT-----TBCHHHHHHHHHHTT
T ss_pred             CCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEECCCC-----CCCHHHHHHHHHHCC
T ss_conf             878999994987749999999776998839999995796537777877639987633786-----506899999998749


Q ss_pred             CEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCC
Q ss_conf             30364311222057213210665423135322333244421210000246534453033123218662677899871899
Q gi|254780570|r   83 PDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQ  162 (205)
Q Consensus        83 ~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~  162 (205)
                      +|++|+++|++++|+++++.++.+++|+|||+||+|||.+|++||+.||++++|+|+|+|++++|+||||.|++++|.++
T Consensus        83 ~Dl~v~~~~~~ii~~~~l~~~~~~~iN~HpslLP~yRG~~p~~wai~ng~~~~GvTih~~~~~~D~G~Ii~q~~~~i~~~  162 (215)
T 3kcq_A           83 VDLVCLAGFMSILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAGVKIAGCTLHYVYQELDAGPIIMQAAVPVLRE  162 (215)
T ss_dssp             CSEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTTTCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTT
T ss_pred             CCEEEEECCHHHCCHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCC
T ss_conf             99999924002267655102565641238743566688320778987798251658999706876898578999875999


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEE
Q ss_conf             89999999999999999999999998695699898699
Q gi|254780570|r  163 DTESSLSQKVLSAEHLLYPLALKYTILGKTSNSNDHHH  200 (205)
Q Consensus       163 d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~~~~  200 (205)
                      ||..+|..|+..++++++.++++.+.+|++...++++.
T Consensus       163 ~t~~~l~~~~~~~~~~l~~~~l~~i~~~~~~~~~~~~~  200 (215)
T 3kcq_A          163 DTAESLASRILAAEHVCYPKGVKLIAQDKIKLCDDGTV  200 (215)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECTTSCE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCE
T ss_conf             99999999999999999999999999699478779967


No 5  
>>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} (A:)
Probab=100.00  E-value=2.6e-40  Score=298.20  Aligned_cols=196  Identities=41%  Similarity=0.683  Sum_probs=186.8

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             65999976985018999999973999847999997688887888998608950463013233221012432100012343
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP   83 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~   83 (205)
                      .||++|+|++||||++|++++..+..+++|++|+|+++++.+..+.....+.....+...+..+...+.++.+.+++.+|
T Consensus         1 ~rI~~~gs~~~s~l~~ll~~~~~~~~~~~i~~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   80 (209)
T 1meo_A            1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSI   80 (209)
T ss_dssp             CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             98999982784659999999766999978999996897557776777539861564342458988889999999986099


Q ss_pred             EEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCC
Q ss_conf             03643112220572132106654231353223332444212100002465344530331232186626778998718998
Q gi|254780570|r   84 DLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQD  163 (205)
Q Consensus        84 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~d  163 (205)
                      |++|+++|++++|+++++.+++++||+|||+||+|||++|++||+.+|++++|+|+|+|++++|+|||+.|++++|.++|
T Consensus        81 D~~v~~~~~~ii~~~~l~~~~~~~iN~HpslLP~yRG~~p~~wai~~g~~~~G~Tih~~~~~~D~G~Ii~q~~~~i~~~d  160 (209)
T 1meo_A           81 DIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGD  160 (209)
T ss_dssp             CEEEEESCCSCCCHHHHHHTTTSEEEEESSSTTSSCSSCHHHHHHHHTCSEEEEEEEECCC---CCCEEEEEEEECCTTC
T ss_pred             CEEEEECCCCCCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCC
T ss_conf             99999643410669999727688277378757654313789999986990677799996078868985789998759999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEE
Q ss_conf             999999999999999999999999869569989869
Q gi|254780570|r  164 TESSLSQKVLSAEHLLYPLALKYTILGKTSNSNDHH  199 (205)
Q Consensus       164 ~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~~~  199 (205)
                      |+.+|..|+..++.+++.++|+.+++|+....+++.
T Consensus       161 t~~~l~~~~~~~~~~ll~~~l~~l~~~~~~~~~d~~  196 (209)
T 1meo_A          161 TVATLSERVKLAEHKIFPAALQLVASGTVQLGENGK  196 (209)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTSEEECTTSS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCE
T ss_conf             999999999999999999999999839969889987


No 6  
>>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A* (A:)
Probab=100.00  E-value=1.3e-39  Score=293.41  Aligned_cols=198  Identities=34%  Similarity=0.544  Sum_probs=184.5

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      ++||++|+|++++||++++++.. ++.++++++|+|+++ ......++..++|+...+...+..+...++++.+.+++.+
T Consensus        12 pmki~~~gs~~~~~l~~ll~~~~-~~~~~~i~~v~t~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~   89 (215)
T 3da8_A           12 PARLVVLASGTGSLLRSLLDAAV-GDYPARVVAVGVDRE-CRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHE   89 (215)
T ss_dssp             SEEEEEEESSCCHHHHHHHHHSS-TTCSEEEEEEEESSC-CHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEEECCCCHHHHHHHHHHC-CCCCCEEEEEEECCC-HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC
T ss_conf             88899998378155999999638-799977999995686-6676653431686467402210136788888776554303


Q ss_pred             CEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCC
Q ss_conf             30364311222057213210665423135322333244421210000246534453033123218662677899871899
Q gi|254780570|r   83 PDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQ  162 (205)
Q Consensus        83 ~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~  162 (205)
                      +|++|+++|++++|+++++.++.+++|+|||+||+|||++|++||+.+|++++|+|+|+|++++|+|||+.|+++||.++
T Consensus        90 ~Dl~v~~~~~~iip~~~l~~~~~~~iN~Hps~LP~yRG~~p~~wai~~g~~~~G~TiH~i~~~~D~G~Ii~q~~~~i~~~  169 (215)
T 3da8_A           90 PDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDG  169 (215)
T ss_dssp             CSEEEEEECCSCCCHHHHHHHTTTEEEEESSCTTSSCSTTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTT
T ss_pred             CCEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCEECEEEEEEECCCCCCCEEEEEEEECCCC
T ss_conf             32144114102430100001222233337776432002320456764488275407899725667652677789980899


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEE
Q ss_conf             8999999999999999999999999869569989869995
Q gi|254780570|r  163 DTESSLSQKVLSAEHLLYPLALKYTILGKTSNSNDHHHLI  202 (205)
Q Consensus       163 d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~~~~~~  202 (205)
                      ||..+|..|+..++.+++.++++.+.+|++....+++...
T Consensus       170 dt~~~l~~~~~~~~~~l~~~~l~~l~~~~~~~~~Q~~ty~  209 (215)
T 3da8_A          170 DDEETLHERIKVTERRLLVAAVAALATHGVTVVGRTATMG  209 (215)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTEEEEC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEC
T ss_conf             9999999999999999999999999829987989897986


No 7  
>>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} (A:1-204)
Probab=100.00  E-value=3.2e-37  Score=276.88  Aligned_cols=184  Identities=22%  Similarity=0.318  Sum_probs=159.8

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH----------HHHHHCCCCEEEEECCCCCCCCCHHH
Q ss_conf             66599997698501899999997399984799999768888788----------89986089504630132332210124
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGL----------VKARKEKVPTFPIPYKDYISRREHEK   72 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l----------~~a~~~~Ip~~~i~~~~~~~~~~~~~   72 (205)
                      |+||++  +|+|+.+..++++..+.  +++|+.|+|+++++.+.          ..|++++||++..       ....+.
T Consensus         3 ~mki~~--~g~~~~~~~~l~~L~~~--~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~   71 (204)
T 1fmt_A            3 SLRIIF--AGTPDFAARHLDALLSS--GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQP-------VSLRPQ   71 (204)
T ss_dssp             CCEEEE--EECSHHHHHHHHHHHHT--TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECC-------SCSCSH
T ss_pred             CCEEEE--ECCCHHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEECC-------CCCCCH
T ss_conf             618999--86788999999999978--9967999959997455787588898999999859968746-------768989


Q ss_pred             HHHHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEE
Q ss_conf             32100012343036431122205721321066542313532233324442121000024653445303312321866267
Q gi|254780570|r   73 AILMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPII  152 (205)
Q Consensus        73 ~l~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii  152 (205)
                      ++.+.+++.+||++|+++|++++|+++++.+++++||+|||+||+|||.+|+.||+.||++++|+|+|+|++++|+|||+
T Consensus        72 ~~~~~l~~~~~Dliv~~~~~~ii~~~il~~~~~~~iN~HpslLP~yRG~~p~~wai~ng~~~~G~TiH~~~~~iD~G~Ii  151 (204)
T 1fmt_A           72 ENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDML  151 (204)
T ss_dssp             HHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSSTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEE
T ss_pred             HHHHHHHHHCCCEEEEECCHHHCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCEE
T ss_conf             99999986498999994601238999994277999998177466778989899999859974889879851688777758


Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf             789987189989999999999999999999999998695699898
Q gi|254780570|r  153 AQAAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNSND  197 (205)
Q Consensus       153 ~q~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~  197 (205)
                      .|++++|.++||+++|+.|+..++.+++.++++.+.+|+++...+
T Consensus       152 ~q~~~~I~~~dt~~~l~~~~~~~~~~l~~~~i~~l~~~~~~~~~Q  196 (204)
T 1fmt_A          152 YKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQ  196 (204)
T ss_dssp             EEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCBCC
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             999876699999999999999999999999999997499552528


No 8  
>>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} (A:1-232)
Probab=100.00  E-value=4.2e-37  Score=276.04  Aligned_cols=194  Identities=18%  Similarity=0.221  Sum_probs=167.7

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC--HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             9866599997698501899999997399984799999768888--78889986089504630132332210124321000
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNA--QGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL   78 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da--~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l   78 (205)
                      |..+|+.|+++|+|+.+.+++++...+...+.++++++++++.  .....|+++++|.....  ...++..++.++.+.+
T Consensus        18 ~~~~~~~i~~~G~~~~~~~~l~~l~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~i~~~~~~--~~~~~~~~~~~~~~~l   95 (232)
T 2bw0_A           18 LYFQSMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYS--RWRAKGQALPDVVAKY   95 (232)
T ss_dssp             ---CCCEEEEECCHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECS--CCEETTEECHHHHHHH
T ss_pred             HHHHCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEECCC--CCCCCCCCCHHHHHHH
T ss_conf             87543289998897999999999998899789999289989898979999998399887643--3687001489999999


Q ss_pred             CCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEE
Q ss_conf             12343036431122205721321066542313532233324442121000024653445303312321866267789987
Q gi|254780570|r   79 SSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVP  158 (205)
Q Consensus        79 ~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~  158 (205)
                      ++++||++|+++|++++++++++.+++++||+|||+||+|||.+|++||+.||++++|+|+|+|++++|+||||.|++++
T Consensus        96 ~~~~~D~~v~~~~~~ii~~~~l~~~~~~~iN~HpslLP~yRG~~p~~wai~nge~~~GvTiH~i~~~iD~G~Ii~q~~~~  175 (232)
T 2bw0_A           96 QALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECE  175 (232)
T ss_dssp             HTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSCTTTTBSSCHHHHHHHTTCSEEEEEEEECCSSSSCSCEEEEEEEE
T ss_pred             HHHCCCCCHHHHHHHCCCEEEECCCCCHHHHCCCCHHHCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCEEECCCC
T ss_conf             86099731123322123313300017858767787254378864020010310145573455302334666510153334


Q ss_pred             CCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             189989999999999-99999999999999869569989
Q gi|254780570|r  159 VSSQDTESSLSQKVL-SAEHLLYPLALKYTILGKTSNSN  196 (205)
Q Consensus       159 i~~~d~~~~l~~rv~-~~E~~l~~~~i~~~~~g~i~~~~  196 (205)
                      |.++||..+|+.|++ .++.++++++++.+.+|+++...
T Consensus       176 I~~~dt~~~l~~k~~~~~~~~ll~~~l~~l~~~~~~~~~  214 (232)
T 2bw0_A          176 VLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLP  214 (232)
T ss_dssp             CCTTCCHHHHHHHTTTHHHHHHHHHHHHHHHHTCCCCBC
T ss_pred             CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
T ss_conf             673122346677665321000467777663048621013


No 9  
>>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} (A:1-207)
Probab=100.00  E-value=2.2e-36  Score=271.16  Aligned_cols=180  Identities=23%  Similarity=0.330  Sum_probs=158.9

Q ss_pred             CEEEEEECCCCH--HHHHHHHHHHCCCCCCEEEEEEECCCCCHH-------HHHHHHCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf             659999769850--189999999739998479999976888878-------88998608950463013233221012432
Q gi|254780570|r    4 KNIVIFISGEGT--NMLSLIQATKKNDYPAEIVGVFSDNSNAQG-------LVKARKEKVPTFPIPYKDYISRREHEKAI   74 (205)
Q Consensus         4 ~riavl~SG~Gs--nl~~Il~~~~~~~~~~eI~~Visn~~da~~-------l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l   74 (205)
                      +||++|+|+.++  +|++|++.      +++|+.|+|+.++...       -..|...++|.+..       ...++.++
T Consensus         1 Mki~~~gs~~~~~~~l~~L~~~------~~~i~~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~   67 (207)
T 1z7e_A            1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAP-------DNVNHPLW   67 (207)
T ss_dssp             CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC--------CCHHHHHHHHTCCEECC-------SCTTSHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHC------CCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEECC-------CCCCCHHH
T ss_conf             9599991767899999999978------9978999838999977678887999999879968846-------98998999


Q ss_pred             HHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEE
Q ss_conf             10001234303643112220572132106654231353223332444212100002465344530331232186626778
Q gi|254780570|r   75 LMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQ  154 (205)
Q Consensus        75 ~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q  154 (205)
                      .+.+++.++|++++++|++|+|+++++.+++++||+|||+||+|||.+|++||+.||++++|+|+|+|++++|+|||+.|
T Consensus        68 ~~~l~~~~~Dliv~~~~~~ii~~~~l~~~~~~~iN~Hps~LP~yRG~~p~~wai~~g~~~~G~T~h~~~~~iD~G~Ii~q  147 (207)
T 1z7e_A           68 VERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQ  147 (207)
T ss_dssp             HHHHHHHCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSSTTTTCSSCHHHHHHHTTCSEEEEEEEECCSSTTTSCEEEE
T ss_pred             HHHHHHCCCCEEEEEHHHHHCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEE
T ss_conf             99998359899998102334699998148888799878768566780789999986997426389998623440104577


Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             998718998999999999999999999999999869569989
Q gi|254780570|r  155 AAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNSN  196 (205)
Q Consensus       155 ~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~  196 (205)
                      ++++|.++||+++|..|+..++.+++.++++.+.+++++...
T Consensus       148 ~~~~i~~~dt~~~l~~~~~~~~~~l~~~~i~~l~~~~~~~~~  189 (207)
T 1z7e_A          148 LRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIA  189 (207)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCBC
T ss_pred             ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             301354202344556778999999999999999759986215


No 10 
>>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} (A:1-207)
Probab=100.00  E-value=2.2e-36  Score=271.16  Aligned_cols=180  Identities=23%  Similarity=0.325  Sum_probs=159.1

Q ss_pred             CEEEEEECCCCH--HHHHHHHHHHCCCCCCEEEEEEECCCCCH-------HHHHHHHCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf             659999769850--18999999973999847999997688887-------888998608950463013233221012432
Q gi|254780570|r    4 KNIVIFISGEGT--NMLSLIQATKKNDYPAEIVGVFSDNSNAQ-------GLVKARKEKVPTFPIPYKDYISRREHEKAI   74 (205)
Q Consensus         4 ~riavl~SG~Gs--nl~~Il~~~~~~~~~~eI~~Visn~~da~-------~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l   74 (205)
                      +||++|+|+.++  +|++|++.      +++|+.|+|+.++..       .-..|...++|.+..       ...++.++
T Consensus         1 Mki~~~gs~~~~~~~l~~L~~~------~~~i~~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~   67 (207)
T 2bln_A            1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAP-------DNVNHPLW   67 (207)
T ss_dssp             CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC------CCCCHHHHHHHHTCCEECC-------SCCCSHHH
T ss_pred             CEEEEEECCHHHHHHHHHHHHC------CCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEE-------CCCCCHHH
T ss_conf             9599990678999999999978------9988999838999977678688999999879989930-------30132467


Q ss_pred             HHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEE
Q ss_conf             10001234303643112220572132106654231353223332444212100002465344530331232186626778
Q gi|254780570|r   75 LMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQ  154 (205)
Q Consensus        75 ~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q  154 (205)
                      .+.+++.++|++++++|++|+|+++++.+++++||+|||+||+|||.+|++||+.||++++|+|+|+|++++|+|||+.|
T Consensus        68 ~~~l~~~~~Dliv~~~~~~ii~~~~l~~~~~~~iN~Hps~LP~yRG~~p~~wai~~g~~~~G~T~h~~~~~iD~G~Ii~q  147 (207)
T 2bln_A           68 VERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQ  147 (207)
T ss_dssp             HHHHHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSCTTTTEESCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEE
T ss_pred             HHHHHHHCCCCCCCCCCCCHHHEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCEEE
T ss_conf             77777634342101112310110110212557876355455432455401121214434422101130144556841014


Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             998718998999999999999999999999999869569989
Q gi|254780570|r  155 AAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNSN  196 (205)
Q Consensus       155 ~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~  196 (205)
                      ++++|.++||+++|..|+..++.+++.++++.+.+++++...
T Consensus       148 ~~~~i~~~dt~~~l~~~~~~~~~~l~~~~i~~l~~~~~~~~~  189 (207)
T 2bln_A          148 LRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIA  189 (207)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCBC
T ss_pred             CCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             332344410112210201356788632001232222223344


No 11 
>>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory for structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum atcc 27405} (A:1-201)
Probab=99.98  E-value=5.5e-33  Score=247.69  Aligned_cols=178  Identities=12%  Similarity=0.197  Sum_probs=155.0

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             65999976985018999999973999847999997688887888998608950463013233221012432100012343
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP   83 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~   83 (205)
                      .+++.+.|++|+++..++..   +....++..++++++++...+.|++++||++.++.      ..++.++.+.+++++|
T Consensus         8 ~~il~~l~~~~~~l~~vi~~---~~~~~~i~~~~~~~~~~~~~~~a~~~~i~~~~~~~------~~~~~~~~~~l~~~~~   78 (201)
T 1zgh_A            8 HHHSSGLVPRGSQSTSLYKK---AGLXNIIIATTKSWNIKNAQKFKKENESKYNTTII------TNKDELTFEKVKLINP   78 (201)
T ss_dssp             -------------------------CEEEEEECCSHHHHHHHHHHHHHTTTTEEEEEE------CSGGGCCHHHHHHHCC
T ss_pred             CCCCCCCCCCCHHHHHHHHH---HHCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEE------CCCCHHHHHHHHHCCC
T ss_conf             23201302362146667756---50255899955277799999999973045316764------1815888999985499


Q ss_pred             EEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCC
Q ss_conf             03643112220572132106654231353223332444212100002465344530331232186626778998718998
Q gi|254780570|r   84 DLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQD  163 (205)
Q Consensus        84 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~d  163 (205)
                      |++|++||++++++.++..+  ++||+|||+||+|||++|++||+.+|++++|+|+|+|++++|+|+||.|+.++|+  |
T Consensus        79 Dl~v~~~~~~i~~~~~~~~~--~~iN~Hps~LP~yRG~~p~~wai~~g~~~~G~Tih~~~~~iD~G~Ii~q~~~~i~--d  154 (201)
T 1zgh_A           79 EYILFPHWSWIIPKEIFENF--TCVVFHXTDLPFGRGGSPLQNLIERGIKKTKISAIKVDGGIDTGDIFFKRDLDLY--G  154 (201)
T ss_dssp             SEEEESSCCSCCCHHHHTTS--CEEEEESSCTTTTEESCHHHHHHHTTCCEEEEEEEECCSSSSCSCEEEEEEEECC--S
T ss_pred             CEEEEECHHHHCCHHHHHCC--CCEEECCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCC--C
T ss_conf             99999673322389999429--9857878689867455640365652544332056674035553000210112344--4


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf             9999999999999999999999998695699898
Q gi|254780570|r  164 TESSLSQKVLSAEHLLYPLALKYTILGKTSNSND  197 (205)
Q Consensus       164 ~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~  197 (205)
                      |+.+|..|   +++++++++|+.+++|++....+
T Consensus       155 t~~~l~~k---~~~~~~~~~i~~i~~g~~~~~~Q  185 (201)
T 1zgh_A          155 TAEEIFXR---ASKIIFNDXIPELLTKRPVPQKQ  185 (201)
T ss_dssp             CHHHHHHH---HHHHHHHTHHHHHHHHCCCCBCC
T ss_pred             CHHHHHHH---HHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             10356778---99998655223232221112334


No 12 
>>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} (A:1-171,A:340-364)
Probab=94.87  E-value=0.11  Score=31.83  Aligned_cols=110  Identities=10%  Similarity=0.032  Sum_probs=61.9

Q ss_pred             CCEEEEEECCCCH---HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCC----------
Q ss_conf             6659999769850---189999999739998479999976888878889986089504630132332210----------
Q gi|254780570|r    3 RKNIVIFISGEGT---NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRRE----------   69 (205)
Q Consensus         3 k~riavl~SG~Gs---nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~----------   69 (205)
                      ++||+++.++.|.   .+.+|.+...+.  +.+|..+.....+.  -+..+..|+++..++.........          
T Consensus         6 ~mrIL~v~~~~gG~~~~~~~la~~L~~~--G~eV~v~~~~~~~~--~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~   81 (196)
T 1f0k_A            6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWLGTADRME--ADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRI   81 (196)
T ss_dssp             -CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEEECTTSTH--HHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHH--HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf             9879999178468799999999999978--89799997887065--5444442970899845786777789999869999


Q ss_pred             --HHHHHHHHCCCCCCEEEEEEEEEEECCCHHHH-CCCCC-EEECCCCCCC
Q ss_conf             --12432100012343036431122205721321-06654-2313532233
Q gi|254780570|r   70 --HEKAILMQLSSIQPDLICLAGYMRLLSRDFVE-SYKNK-ILNIHPSLLP  116 (205)
Q Consensus        70 --~~~~l~~~l~~~~~Dliv~~g~~~il~~~~l~-~~~~~-~iN~HpslLP  116 (205)
                        .-.++.+.+++.+||+|++.++.--+..-+.. ..+.. ++-.|.....
T Consensus        82 ~~~~~~l~~~l~~~kpDiI~~~~~~~~~~~~~~~~~~~ip~v~~~h~~~~~  132 (196)
T 1f0k_A           82 FNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAG  132 (196)
T ss_dssp             HHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCC
T ss_pred             HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf             999999999975029978997897341999999986699889982687743


No 13 
>>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} (A:1-127,A:277-330)
Probab=94.06  E-value=0.16  Score=30.68  Aligned_cols=72  Identities=14%  Similarity=0.117  Sum_probs=45.3

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             98665999976985018999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      |.|.|++|.  |.|.-....+...+... ++++++|++.++ ....+.++++++|...      .+       +-+.+.+
T Consensus         3 M~kirVgII--G~G~ia~~~~~~l~~~~-~~eIvaI~d~~~-eka~~~a~k~~i~~~~------~d-------~eell~~   65 (181)
T 3e9m_A            3 LDKIRYGIX--STAQIVPRFVAGLRESA-QAEVRGIASRRL-ENAQKXAKELAIPVAY------GS-------YEELCKD   65 (181)
T ss_dssp             CCCEEEEEC--SCCTTHHHHHHHHHHSS-SEEEEEEBCSSS-HHHHHHHHHTTCCCCB------SS-------HHHHHHC
T ss_pred             CCCCEEEEE--CCHHHHHHHHHHHHHCC-CCEEEEEECCCH-HHHHHHHHHCCCCEEE------CC-------HHHHHHC
T ss_conf             778489999--88299999999997389-918999988999-9999999984998254------98-------9999717


Q ss_pred             CCCEEEEEE
Q ss_conf             343036431
Q gi|254780570|r   81 IQPDLICLA   89 (205)
Q Consensus        81 ~~~Dliv~~   89 (205)
                      .++|+|+.+
T Consensus        66 ~~vD~V~I~   74 (181)
T 3e9m_A           66 ETIDIIYIP   74 (181)
T ss_dssp             TTCSEEEEC
T ss_pred             CCCCCCCCC
T ss_conf             775511133


No 14 
>>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative; 2.00A {Streptococcus agalactiae serogroup V} (A:1-128,A:277-329)
Probab=92.27  E-value=0.24  Score=29.43  Aligned_cols=73  Identities=16%  Similarity=0.124  Sum_probs=42.8

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             98665999976985018999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      |.+.|+++++.|  +-....+.+..... ++++++|++.++. .....++++++|...-      +       +-+.+.+
T Consensus         3 m~~irvgIIG~G--~~g~~~~~~l~~~~-~~eIvaI~d~~~e-ka~~~a~~~~~p~~~~------d-------~e~ll~~   65 (181)
T 3evn_A            3 LSKVRYGVVSTA--KVAPRFIEGVRLAG-NGEVVAVSSRTLE-SAQAFANKYHLPKAYD------K-------LEDMLAD   65 (181)
T ss_dssp             --CEEEEEEBCC--TTHHHHHHHHHHHC-SEEEEEEECSCSS-TTCC---CCCCSCEES------C-------HHHHHTC
T ss_pred             CCCCEEEEECCH--HHHHHHHHHHHHCC-CCEEEEEECCCHH-HHHHHHHHCCCCCEEC------C-------HHHHHCC
T ss_conf             888589999982--99999999998689-9489999899999-9999999849982448------8-------9999638


Q ss_pred             CCCEEEEEEE
Q ss_conf             3430364311
Q gi|254780570|r   81 IQPDLICLAG   90 (205)
Q Consensus        81 ~~~Dliv~~g   90 (205)
                      .++|+|+.+.
T Consensus        66 ~~iD~V~Iat   75 (181)
T 3evn_A           66 ESIDVIYVAT   75 (181)
T ss_dssp             TTCCEEEECS
T ss_pred             CCCCHHCCCC
T ss_conf             7644000234


No 15 
>>3db2_A Putative NADPH-dependent oxidoreductase; ZP_01370612.1, structural genomics, joint center for structural genomics, JCSG; 1.70A {Desulfitobacterium hafniense dcb-2} (A:1-127,A:299-354)
Probab=92.09  E-value=0.59  Score=26.81  Aligned_cols=72  Identities=10%  Similarity=0.066  Sum_probs=47.6

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             98665999976985018999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      |.+.|+++.  |.|+--...+.++..- ..++++.|++.+++ ..-..++++++|.+.       +       +.+.+..
T Consensus         3 m~~IrVgII--G~G~~g~~~~~al~~~-~~~eIvaV~dr~~e-~a~~~a~~~gi~~~~-------s-------~eell~~   64 (183)
T 3db2_A            3 YNPVGVAAI--GLGRWAYVXADAYTKS-EKLKLVTCYSRTED-KREKFGKRYNCAGDA-------T-------XEALLAR   64 (183)
T ss_dssp             CCCEEEEEE--CCSHHHHHHHHHHTTC-SSEEEEEEECSSHH-HHHHHHHHHTCCCCS-------S-------HHHHHHC
T ss_pred             CCCCEEEEE--CCHHHHHHHHHHHHHC-CCEEEEEEECCCHH-HHHHHHHHHCCCCCC-------C-------HHHHHCC
T ss_conf             998789999--7709999999999748-99189999889999-999999983998428-------9-------9999559


Q ss_pred             CCCEEEEEEE
Q ss_conf             3430364311
Q gi|254780570|r   81 IQPDLICLAG   90 (205)
Q Consensus        81 ~~~Dliv~~g   90 (205)
                      .++|+++.+.
T Consensus        65 ~~vD~ViIat   74 (183)
T 3db2_A           65 EDVEXVIITV   74 (183)
T ss_dssp             SSCCEEEECS
T ss_pred             CCCCEEEEEC
T ss_conf             9999999708


No 16 
>>2o4u_X Dimeric dihydrodiol dehydrogenase; NADP-binding rossmann-fold domain, predominantly anti- parallel beta sheet, oxidoreductase; 2.00A {Macaca fascicularis} PDB: 2o48_X 2poq_X* (X:1-127,X:278-334)
Probab=92.02  E-value=0.75  Score=26.08  Aligned_cols=72  Identities=10%  Similarity=0.018  Sum_probs=44.8

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHC-CCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             8665999976985018999999973-999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKK-NDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~-~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      |+.|++++  |.|.-.......... ....++++.|.+.+ ....-++++++++|...-+             .-+.+.+
T Consensus         1 M~ir~gII--G~G~ia~~~~~~l~~~~~~~~~ivaV~~r~-~~~a~~fa~~~~~~~~~~s-------------~eell~d   64 (184)
T 2o4u_X            1 MALRWGIV--SVGLISSDFTAVLQTLPRSEHQVVAVAARD-LSRAKEFAQKHDIPKAYGS-------------YEELAKD   64 (184)
T ss_dssp             -CEEEEEE--CCSHHHHHHHHHHTTSCTTTEEEEEEECSS-HHHHHHHHHHHTCSEEESS-------------HHHHHTC
T ss_pred             CCEEEEEE--CCCHHHHHHHHHHHHCCCCCEEEEEEECCC-HHHHHHHHHHCCCCCEECC-------------HHHHHCC
T ss_conf             97689998--887999999999985868885999998799-9999999998399814389-------------9999659


Q ss_pred             CCCEEEEEE
Q ss_conf             343036431
Q gi|254780570|r   81 IQPDLICLA   89 (205)
Q Consensus        81 ~~~Dliv~~   89 (205)
                      .++|+|+.+
T Consensus        65 ~~vD~V~Ia   73 (184)
T 2o4u_X           65 PNVEVAYVG   73 (184)
T ss_dssp             TTCSEEEEC
T ss_pred             CCCCEEECC
T ss_conf             897822202


No 17 
>>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, structural genomics; 2.00A {Exiguobacterium sibiricum 255-15} (A:1-104)
Probab=91.78  E-value=0.26  Score=29.23  Aligned_cols=75  Identities=13%  Similarity=0.111  Sum_probs=44.3

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      ++||.|+.||...   +|..+.+..+..+++.++=+ +|.+.++..+.+    ++.+|..   ..+.|-+.+++.+++.+
T Consensus         4 ~~kVLv~g~G~~~---al~~a~~~~~~~~~vi~~d~-~~~~~~~~~~d~----~~~iP~~---~~~~~~~~l~~i~~~~~   72 (104)
T 2pn1_A            4 KPHLLITSAGRRA---KLVEYFVKEFKTGRVSTADC-SPLASALYXADQ----HYIVPKI---DEVEYIDHLLTLCQDEG   72 (104)
T ss_dssp             CCEEEEESCTTCH---HHHHHHHHHCCSSEEEEEES-CTTCGGGGGSSS----EEECCCT---TSTTHHHHHHHHHHHHT
T ss_pred             CCEEEECCCCHHH---HHHHHHHHCCCCCEEEEECC-CCCCHHHHHCCE----EEECCCC---CCHHHHHHHHHHHHHHC
T ss_conf             8789991784699---99999997699998999869-999867884286----7976898---73779999999999859


Q ss_pred             CEEEEE
Q ss_conf             303643
Q gi|254780570|r   83 PDLICL   88 (205)
Q Consensus        83 ~Dliv~   88 (205)
                      +|+++.
T Consensus        73 iD~vip   78 (104)
T 2pn1_A           73 VTALLT   78 (104)
T ss_dssp             CCEEEE
T ss_pred             CCEEEE
T ss_conf             998940


No 18 
>>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, infectious diseases, isomerase; 2.35A {Vibrio cholerae} (A:1-196,A:382-396)
Probab=91.64  E-value=0.95  Score=25.38  Aligned_cols=115  Identities=13%  Similarity=0.082  Sum_probs=60.4

Q ss_pred             CCCCEEEEEECCCCH---HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCE-EEEECCCCC-CC----CCHH
Q ss_conf             986659999769850---18999999973999847999997688887888998608950-463013233-22----1012
Q gi|254780570|r    1 MIRKNIVIFISGEGT---NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPT-FPIPYKDYI-SR----REHE   71 (205)
Q Consensus         1 M~k~riavl~SG~Gs---nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~-~~i~~~~~~-~~----~~~~   71 (205)
                      |.++||+++. |+=.   -+..+++++++.. .+++.+|.|...........++.+++. +.++..... +.    ..--
T Consensus        23 ~~~~kI~~vt-GtR~e~~klaPli~~l~~~~-~~~~~lv~TGqH~~~~~~~i~~~g~~~~~~~~l~~~~~s~~~~~~~~~  100 (211)
T 3dzc_A           23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDN-RFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKIL  100 (211)
T ss_dssp             -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCT-TEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHH
T ss_pred             CCCCEEEEEE-EHHHHHHHHHHHHHHHHHCC-CCCEEEEEECCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHH
T ss_conf             6986199999-73271999999999997289-987799990899899999998459788720103889988999999999


Q ss_pred             HHHHHHCCCCCCEEEEEEEEE-EECCCHHHH-CCCCCEEECCCCCCCC
Q ss_conf             432100012343036431122-205721321-0665423135322333
Q gi|254780570|r   72 KAILMQLSSIQPDLICLAGYM-RLLSRDFVE-SYKNKILNIHPSLLPL  117 (205)
Q Consensus        72 ~~l~~~l~~~~~Dliv~~g~~-~il~~~~l~-~~~~~~iN~HpslLP~  117 (205)
                      ..+.+.+...+||+|+..|=. --+..-+.. ..+..+.-++.++...
T Consensus       101 ~~l~~~l~~~~PD~VlV~GD~~~~La~AlaA~~~~IPvaHieaGlrs~  148 (211)
T 3dzc_A          101 LGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLRTG  148 (211)
T ss_dssp             HHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCCCS
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf             999998986267645400146542137777650355326850465556


No 19 
>>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} (A:1-133)
Probab=91.01  E-value=0.57  Score=26.92  Aligned_cols=57  Identities=11%  Similarity=0.052  Sum_probs=39.5

Q ss_pred             CCCEEEEEECCC--CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEC
Q ss_conf             866599997698--501899999997399984799999768888788899860895046301
Q gi|254780570|r    2 IRKNIVIFISGE--GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPY   61 (205)
Q Consensus         2 ~k~riavl~SG~--Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~   61 (205)
                      ..|||+||.|.+  |++...+++..   .-.++|+++-.++.-..-.+.+++++.++.++..
T Consensus         8 ~mk~i~ILGSTGSIG~qtL~Vi~~~---~d~f~vv~lsa~~n~~~L~~q~~ef~p~~v~v~d   66 (133)
T 1q0q_A            8 GMKQLTILGSTGSIGCSTLDVVRHN---PEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDD   66 (133)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHC---TTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC---CCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEC
T ss_conf             9968999754879899999999839---4774899999489799999999983999999948


No 20 
>>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima} (A:1-125,A:255-302)
Probab=90.10  E-value=1.2  Score=24.75  Aligned_cols=71  Identities=13%  Similarity=-0.028  Sum_probs=45.1

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             86659999769850189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      |+.|+++.  |.|.-....+.+..... +.++++|+. +.....-+.+++++++...-      +       +-+.+.+.
T Consensus         1 MtlkVgiI--G~G~~g~~~l~al~~~~-~~eivai~d-~~~~~a~~~a~~~~~~~~~~------d-------~eell~~~   63 (173)
T 3ezy_A            1 MSLRIGVI--GLGRIGTIHAENLKMID-DAILYAISD-VREDRLREMKEKLGVEKAYK------D-------PHELIEDP   63 (173)
T ss_dssp             -CEEEEEE--CCSHHHHHHHHHGGGST-TEEEEEEEC-SCHHHHHHHHHHHTCSEEES------S-------HHHHHHCT
T ss_pred             CCEEEEEE--CCCHHHHHHHHHHHHCC-CCEEEEEEC-CCHHHHHHHHHHCCCCCCCC------C-------HHHHHCCC
T ss_conf             97069999--97099999999997289-978999989-89999999999839985149------9-------99995499


Q ss_pred             CCEEEEEE
Q ss_conf             43036431
Q gi|254780570|r   82 QPDLICLA   89 (205)
Q Consensus        82 ~~Dliv~~   89 (205)
                      ++|+|+.+
T Consensus        64 ~iD~VvIa   71 (173)
T 3ezy_A           64 NVDAVLVC   71 (173)
T ss_dssp             TCCEEEEC
T ss_pred             CCCEEEEE
T ss_conf             98999982


No 21 
>>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A (A:1-192,A:357-375)
Probab=89.93  E-value=1.6  Score=23.90  Aligned_cols=117  Identities=11%  Similarity=0.049  Sum_probs=59.6

Q ss_pred             CCCEEEEEECCCCH--HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHH--HHHCCCCEEEEECCCCC-----CCCCHHH
Q ss_conf             86659999769850--189999999739998479999976888878889--98608950463013233-----2210124
Q gi|254780570|r    2 IRKNIVIFISGEGT--NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVK--ARKEKVPTFPIPYKDYI-----SRREHEK   72 (205)
Q Consensus         2 ~k~riavl~SG~Gs--nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~--a~~~~Ip~~~i~~~~~~-----~~~~~~~   72 (205)
                      -++||.+.+.+.|.  .+..|+++..+.... ...+|.+.......+.+  .....++...+......     .-.....
T Consensus         7 ~~~kIli~ags~g~~~~~~~li~~L~~~~~~-~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (211)
T 3beo_A            7 ERLKVMTIFGTRPEAIKMAPLVLELQKHPEK-IESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTRGLE   85 (211)
T ss_dssp             SCEEEEEEECSHHHHHHHHHHHHHHTTCTTT-EEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHHHHH
T ss_pred             CCCEEEEEEEHHHHHHHHHHHHHHHHHCCCC-CCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf             6856999997267299999999999838789-888999916878999999997199988111058899779999999999


Q ss_pred             HHHHHCCCCCCEEEEEEEEEE-ECCCHH-HHCCCCCEEECCCCCCCCCC
Q ss_conf             321000123430364311222-057213-21066542313532233324
Q gi|254780570|r   73 AILMQLSSIQPDLICLAGYMR-LLSRDF-VESYKNKILNIHPSLLPLFP  119 (205)
Q Consensus        73 ~l~~~l~~~~~Dliv~~g~~~-il~~~~-l~~~~~~~iN~HpslLP~yr  119 (205)
                      .+...+++++||+|++.|... -++..+ ....+..++..+-++.+..+
T Consensus        86 ~~~~~l~~~kPD~V~v~~~~~~~l~~~laA~~~~IPvv~~~~~~~~~~~  134 (211)
T 3beo_A           86 GLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRTWDK  134 (211)
T ss_dssp             HHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCCCSCT
T ss_pred             HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCC
T ss_conf             8899887447550442014564201588887306317998524556774


No 22 
>>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium LT2} (A:1-149)
Probab=89.22  E-value=1.7  Score=23.55  Aligned_cols=72  Identities=10%  Similarity=0.031  Sum_probs=43.8

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      +.|++++  |.|.-....+........++++++|.+.++ ....+.+++++++.....     +       +.+.+++.+
T Consensus        23 ~~ri~ii--G~G~~g~~~~~~~~~~~~~~~i~~i~~~~~-~~a~~~~~~~~~~~~~~~-----~-------~~~~l~~~~   87 (149)
T 3ec7_A           23 TLKAGIV--GIGXIGSDHLRRLANTVSGVEVVAVCDIVA-GRAQAALDKYAIEAKDYN-----D-------YHDLINDKD   87 (149)
T ss_dssp             CEEEEEE--CCSHHHHHHHHHHHHTCTTEEEEEEECSST-THHHHHHHHHTCCCEEES-----S-------HHHHHHCTT
T ss_pred             CEEEEEE--CCHHHHHHHHHHHHHCCCCCEEEEEECCCH-HHHHHHHHHHCCCCCCCC-----C-------HHHHHCCCC
T ss_conf             5149999--980999999999984699978999977999-999999998299974239-----8-------999963889


Q ss_pred             CEEEEEE
Q ss_conf             3036431
Q gi|254780570|r   83 PDLICLA   89 (205)
Q Consensus        83 ~Dliv~~   89 (205)
                      +|+++.+
T Consensus        88 iD~V~i~   94 (149)
T 3ec7_A           88 VEVVIIT   94 (149)
T ss_dssp             CCEEEEC
T ss_pred             CCEEEEC
T ss_conf             8889741


No 23 
>>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum atcc 13032} (A:1-125)
Probab=89.20  E-value=0.96  Score=25.35  Aligned_cols=84  Identities=13%  Similarity=0.004  Sum_probs=49.0

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             86659999769850189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      ++.|+++.  |.|+-....+.+..... .++++.|++.++ ......++..+++.+.       +       +.+.+...
T Consensus         3 ~~ikv~ii--G~G~~g~~~~~~l~~~~-~~eivav~d~~~-~~~~~~~~~~~~~~~~-------~-------~~~~~~~~   64 (125)
T 3euw_A            3 LTLRIALF--GAGRIGHVHAANIAANP-DLELVVIADPFI-EGAQRLAEANGAEAVA-------S-------PDEVFARD   64 (125)
T ss_dssp             CCEEEEEE--CCSHHHHHHHHHHHHCT-TEEEEEEECSSH-HHHHHHHHTTTCEEES-------S-------HHHHTTCS
T ss_pred             CCEEEEEE--CCCHHHHHHHHHHHCCC-CCEEEEEECCCH-HHHHHHHHHHCCCEEC-------C-------HHHHHCCC
T ss_conf             86679899--97099999999997089-958999988999-9999999983997789-------8-------99995489


Q ss_pred             CCEEEEEEEEEEECCCHHHHCC
Q ss_conf             4303643112220572132106
Q gi|254780570|r   82 QPDLICLAGYMRLLSRDFVESY  103 (205)
Q Consensus        82 ~~Dliv~~g~~~il~~~~l~~~  103 (205)
                      ++|+++.+.-...-.+......
T Consensus        65 ~~d~V~i~t~~~~h~~~~~~al   86 (125)
T 3euw_A           65 DIDGIVIGSPTSTHVDLITRAV   86 (125)
T ss_dssp             CCCEEEECSCGGGHHHHHHHHH
T ss_pred             CCCEEEECCCCHHHHHHHHHHC
T ss_conf             9886641121010123321001


No 24 
>>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A* (A:1-88)
Probab=89.19  E-value=0.88  Score=25.60  Aligned_cols=38  Identities=8%  Similarity=0.083  Sum_probs=26.6

Q ss_pred             CCCCEEEEEECCCCH-------HHHHHHHHHHCCCCCCEEEEEEECCCCC
Q ss_conf             986659999769850-------1899999997399984799999768888
Q gi|254780570|r    1 MIRKNIVIFISGEGT-------NMLSLIQATKKNDYPAEIVGVFSDNSNA   43 (205)
Q Consensus         1 M~k~riavl~SG~Gs-------nl~~Il~~~~~~~~~~eI~~Visn~~da   43 (205)
                      |+|+||+|++-|..+       .+++++++     ++.++.-|..++...
T Consensus         1 M~K~~I~vifGG~S~EheVSl~SA~~v~~~-----L~~~~~~v~I~~~g~   45 (88)
T 2fb9_A            1 MEFMRVLLIAGGVSPEHEVSLLSAEGVLRH-----IPFPTDLAVIAQDGR   45 (88)
T ss_dssp             CCCCCEEEEEECSSTTHHHHHHHHHHHHHH-----CSSCEEEEEECTTSC
T ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHH-----CCCCCCEEEEECCCC
T ss_conf             987889999388841329999999999996-----487776799935886


No 25 
>>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} (A:1-176,A:349-376)
Probab=88.35  E-value=2  Score=23.16  Aligned_cols=160  Identities=9%  Similarity=0.024  Sum_probs=72.7

Q ss_pred             CCCEEEEEECCCCH---HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEE-EECC-CCCCCCC----HHH
Q ss_conf             86659999769850---1899999997399984799999768888788899860895046-3013-2332210----124
Q gi|254780570|r    2 IRKNIVIFISGEGT---NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFP-IPYK-DYISRRE----HEK   72 (205)
Q Consensus         2 ~k~riavl~SG~Gs---nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~-i~~~-~~~~~~~----~~~   72 (205)
                      .+|||+++. |+=.   -+..+++++++.. .+++.+|.|-......+.-...++|.... +... ...+-..    -=.
T Consensus         4 ~~kKIl~vt-GTRae~iklaPli~~l~~~~-~~e~~lv~TGqH~~~~~~~~~~~~i~~d~~l~~~~~~~sl~~~~~~~i~   81 (204)
T 1v4v_A            4 GXKRVVLAF-GTRPEATKXAPVYLALRGIP-GLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVXQERQALPDLAARILP   81 (204)
T ss_dssp             CCEEEEEEE-CSHHHHHHHHHHHHHHHTST-TEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHH
T ss_pred             CCCEEEEEE-EHHHHHHHHHHHHHHHHCCC-CCCEEEEEECCCHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             998899998-75686999999999996189-9988999906874566471224088876567878988889999999999


Q ss_pred             HHHHHCCCCCCEEEEEEEEEE-ECCCHHHH-CCCCCEEECCCCCCCCCCC-CCC--CCCHHCCCCCCCCCCEEEECCC--
Q ss_conf             321000123430364311222-05721321-0665423135322333244-421--2100002465344530331232--
Q gi|254780570|r   73 AILMQLSSIQPDLICLAGYMR-LLSRDFVE-SYKNKILNIHPSLLPLFPG-LHT--HRRVLQSGIKITGCTVHMVTAN--  145 (205)
Q Consensus        73 ~l~~~l~~~~~Dliv~~g~~~-il~~~~l~-~~~~~~iN~HpslLP~yrG-~~~--~~~ai~~g~~~~G~TiH~v~~~--  145 (205)
                      .+.+.+.+++||+|++.|=.- .+..-+.. ..+..+.-+|.++.-.-+- ..|  +.+-...  +  =+++||+..+  
T Consensus        82 ~~~~~l~~~~PD~VlV~GDt~~~lA~AlaA~~~~IPvaHieaGlrS~d~~~~~pEE~~R~~is--~--lA~lHF~~t~~~  157 (204)
T 1v4v_A           82 QAARALKEXGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGNLKEPFPEEANRRLTD--V--LTDLDFAPTPLA  157 (204)
T ss_dssp             HHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCCSCTTSSTTHHHHHHHHH--H--HCSEEEESSHHH
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHC--C--CCCEEEECCHHH
T ss_conf             877665404765231013664311367889876344511103556666567734666554412--3--444365221166


Q ss_pred             ----CCCCCEEEEEEEECCCCCCHHHH
Q ss_conf             ----18662677899871899899999
Q gi|254780570|r  146 ----MDEGPIIAQAAVPVSSQDTESSL  168 (205)
Q Consensus       146 ----~D~G~Ii~q~~~~i~~~d~~~~l  168 (205)
                          +-.|. -.++.+-+..+|....|
T Consensus       158 ~~nL~~eG~-~~~rI~vvGn~~~~~~~  183 (204)
T 1v4v_A          158 KANLLKEGK-REEGILVTGQGDGKAGL  183 (204)
T ss_dssp             HHHHHTTTC-CGGGEEECCCCCSCHHH
T ss_pred             HHHHHHHCC-CCCCEEEECCCCCHHHH
T ss_conf             777776225-55422442148987999


No 26 
>>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 2i80_A* (A:1-99)
Probab=88.27  E-value=0.64  Score=26.56  Aligned_cols=42  Identities=19%  Similarity=0.344  Sum_probs=29.9

Q ss_pred             CCCCEEEEEECCCCH-------HHHHHHHHHHCCCCCCEEEEEEECCCCCH
Q ss_conf             986659999769850-------18999999973999847999997688887
Q gi|254780570|r    1 MIRKNIVIFISGEGT-------NMLSLIQATKKNDYPAEIVGVFSDNSNAQ   44 (205)
Q Consensus         1 M~k~riavl~SG~Gs-------nl~~Il~~~~~~~~~~eI~~Visn~~da~   44 (205)
                      |+|+||+|++-|..+       .+.+++++....  ++++..+.-++....
T Consensus         1 M~k~~i~vlfGG~S~EheVSl~SA~~v~~aL~~~--~y~v~~i~i~~~g~~   49 (99)
T 2i87_A            1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKD--KYHVDIIYITNDGDW   49 (99)
T ss_dssp             --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTT--TEEEEEEEECTTCCE
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH--CCEEEEEEECCCCCE
T ss_conf             9998899996947744799999999999975263--897999998489977


No 27 
>>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis} (A:158-292)
Probab=88.13  E-value=0.59  Score=26.79  Aligned_cols=101  Identities=7%  Similarity=-0.030  Sum_probs=52.4

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEC----CCCCHHHHHHHHC------CCCEEEEECCCCCCCCCHHH
Q ss_conf             6659999769850189999999739998479999976----8888788899860------89504630132332210124
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSD----NSNAQGLVKARKE------KVPTFPIPYKDYISRREHEK   72 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn----~~da~~l~~a~~~------~Ip~~~i~~~~~~~~~~~~~   72 (205)
                      .+|+++.+.++..-+.+++....  .++.++.++--.    .|+...++++++.      +......+            
T Consensus         4 glkia~vGd~~~rv~~S~~~~~~--~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------------   69 (135)
T 3grf_A            4 GIKFAYCGDSMNNVTYDLMRGCA--LLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH------------   69 (135)
T ss_dssp             GCCEEEESCCSSHHHHHHHHHHH--HHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES------------
T ss_pred             CCEEEEECCCCCCHHHHHHHHHH--HCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE------------
T ss_conf             72488726876553779999999--7799699965653456766999999999877523698499995------------


Q ss_pred             HHHHHCCCCCCEEEEEEEE--E----------------EECCCHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf             3210001234303643112--2----------------20572132106654231353223332444
Q gi|254780570|r   73 AILMQLSSIQPDLICLAGY--M----------------RLLSRDFVESYKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        73 ~l~~~l~~~~~Dliv~~g~--~----------------~il~~~~l~~~~~~~iN~HpslLP~yrG~  121 (205)
                      .+.+.++  +.|+|..-.|  +                ..++.++++..+..++=+||  ||.+||.
T Consensus        70 d~~eav~--~aDviyt~~w~~~~~~~~~~~~~~~~~~~y~vt~~ll~~ak~~aivmH~--LP~~Rg~  132 (135)
T 3grf_A           70 DCKKGCE--GVDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNC--LPATRGE  132 (135)
T ss_dssp             SHHHHHT--TCSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEEC--SCCCTTT
T ss_pred             CHHHHHC--CCCEEEECHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECC--CCCCCCC
T ss_conf             7999854--7998985113312320667889998753313559999626999989799--9999888


No 28 
>>1e4e_A Vancomycin/teicoplanin A-type resistance protein VANA; ligase, cell WALL, antibiotic resistance, membrane, plasmid; HET: ADP PHY; 2.5A {Enterococcus faecium} (A:1-119)
Probab=87.96  E-value=0.85  Score=25.71  Aligned_cols=40  Identities=18%  Similarity=0.171  Sum_probs=29.0

Q ss_pred             CCCCEEEEEECCCCH-------HHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf             986659999769850-------189999999739998479999976888
Q gi|254780570|r    1 MIRKNIVIFISGEGT-------NMLSLIQATKKNDYPAEIVGVFSDNSN   42 (205)
Q Consensus         1 M~k~riavl~SG~Gs-------nl~~Il~~~~~~~~~~eI~~Visn~~d   42 (205)
                      |||+||+|++-|..+       .+.+++++...  .++++..|.-++..
T Consensus         1 M~k~~I~vlfGG~S~EheVSi~Sa~~v~~~L~~--~~y~v~~i~i~k~g   47 (119)
T 1e4e_A            1 MNRIKVAILFGGCSEEHDVSVKSAIEIAANINK--EKYEPLYIGITKSG   47 (119)
T ss_dssp             -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCT--TTEEEEEEEECTTS
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH--CCCEEEEEECCCCC
T ss_conf             998789999388853137499999999999887--29979999717997


No 29 
>>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} (A:1-105,A:330-377)
Probab=87.52  E-value=1.1  Score=25.00  Aligned_cols=42  Identities=14%  Similarity=0.259  Sum_probs=30.2

Q ss_pred             CCCCEEEEEECCCCH-------HHHHHHHHHHCCCCCCEEEEEEECCCCC
Q ss_conf             986659999769850-------1899999997399984799999768888
Q gi|254780570|r    1 MIRKNIVIFISGEGT-------NMLSLIQATKKNDYPAEIVGVFSDNSNA   43 (205)
Q Consensus         1 M~k~riavl~SG~Gs-------nl~~Il~~~~~~~~~~eI~~Visn~~da   43 (205)
                      |+|+||+|++-|..+       .+.+++++..... ++++..|..++...
T Consensus         1 M~K~rIaVlfGG~SsEHeVSi~SA~~V~~aL~~~g-ky~V~~I~Itk~G~   49 (153)
T 1ehi_A            1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATG-KYEIIVFAIAQNGF   49 (153)
T ss_dssp             --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHS-SEEEEEEEECTTSC
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC-CEEEEEEEECCCCC
T ss_conf             99989999818896641618999999999876708-91499999768950


No 30 
>>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, ATP-binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} (A:1-110)
Probab=86.47  E-value=1.2  Score=24.59  Aligned_cols=40  Identities=18%  Similarity=0.282  Sum_probs=28.1

Q ss_pred             CCCCEEEEEECCCCH-------HHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf             986659999769850-------189999999739998479999976888
Q gi|254780570|r    1 MIRKNIVIFISGEGT-------NMLSLIQATKKNDYPAEIVGVFSDNSN   42 (205)
Q Consensus         1 M~k~riavl~SG~Gs-------nl~~Il~~~~~~~~~~eI~~Visn~~d   42 (205)
                      |+|+||+|++-|..+       .+.+++++....  ++++..|.-++..
T Consensus         1 M~K~~I~vl~GG~S~EheVSi~SA~~v~~aL~~~--~y~v~~i~I~k~g   47 (110)
T 3i12_A            1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKT--RFDVVLLGIDKAG   47 (110)
T ss_dssp             -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT--TEEEEEEEECTTS
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH--CCEEEEEEECCCC
T ss_conf             9977899995857842899999999999975564--7979999986999


No 31 
>>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genomics, protein structure initiative, PSI; HET: NAD; 1.95A {Listeria innocua} (A:1-125)
Probab=86.39  E-value=1.5  Score=23.98  Aligned_cols=74  Identities=19%  Similarity=0.108  Sum_probs=41.0

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             98665999976985018999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      |.+.|+++.  |.|+-....+.+..+.. +++++.|.+..+ ...-+.+++++.++..               ..+.+..
T Consensus         3 ~~~ikv~ii--G~G~~g~~~~~~l~~~~-~~~i~~i~d~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~   63 (125)
T 3e18_A            3 LKKYQLVIV--GYGGMGSYHVTLASAAD-NLEVHGVFDILA-EKREAAAQKGLKIYES---------------YEAVLAD   63 (125)
T ss_dssp             CCCEEEEEE--CCSHHHHHHHHHHHTST-TEEEEEEECSSH-HHHHHHHTTTCCBCSC---------------HHHHHHC
T ss_pred             CCCCCEEEE--CCCHHHHHHHHHHHHCC-CCEEEEEECCCH-HHHHHHHHCCCCEECC---------------HHHHHCC
T ss_conf             887859999--36899999999998589-968999987999-9999988719971089---------------9999559


Q ss_pred             CCCEEEEEEEEEE
Q ss_conf             3430364311222
Q gi|254780570|r   81 IQPDLICLAGYMR   93 (205)
Q Consensus        81 ~~~Dliv~~g~~~   93 (205)
                      .++|+++.+....
T Consensus        64 ~~~d~v~i~~~~~   76 (125)
T 3e18_A           64 EKVDAVLIATPND   76 (125)
T ss_dssp             TTCCEEEECSCGG
T ss_pred             CCCCEEEEECCCC
T ss_conf             8988899946611


No 32 
>>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} (B:310-418)
Probab=86.07  E-value=2.2  Score=22.83  Aligned_cols=82  Identities=11%  Similarity=0.064  Sum_probs=47.5

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH----HHHHHHCCCC-EEEEECCCCCCCCCHHHHHHHH
Q ss_conf             6659999769850189999999739998479999976888878----8899860895-0463013233221012432100
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQG----LVKARKEKVP-TFPIPYKDYISRREHEKAILMQ   77 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~----l~~a~~~~Ip-~~~i~~~~~~~~~~~~~~l~~~   77 (205)
                      -||++|+  |.++-+-++.++.+  ++..+++++.|..++...    .+..+..+.+ ..++...+       ..++.+.
T Consensus         3 GKrv~i~--gd~~~~~~l~~~l~--ElGm~vv~~~~~~~~~~~~~~~~~~l~~~~~~~~~vv~~~d-------~~el~~~   71 (109)
T 1mio_B            3 GKKVALL--GDPDEIIALSKFII--ELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVEGD-------FFDVHQW   71 (109)
T ss_dssp             TCEEEEE--ECHHHHHHHHHHHH--TTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEESCB-------HHHHHHH
T ss_pred             CCEEEEE--CCCHHHHHHHHHHH--HCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCC-------HHHHHHH
T ss_conf             9879998--88188999999999--84990148872689777789999999865898878997999-------9999999


Q ss_pred             CCCCCCEEEEEEEEEEEC
Q ss_conf             012343036431122205
Q gi|254780570|r   78 LSSIQPDLICLAGYMRLL   95 (205)
Q Consensus        78 l~~~~~Dliv~~g~~~il   95 (205)
                      +++.+||+++.-.|.+.+
T Consensus        72 i~~~~pDliig~s~~~~~   89 (109)
T 1mio_B           72 IKNEGVDLLISNTYGKFI   89 (109)
T ss_dssp             HHHSCCSEEEESGGGHHH
T ss_pred             HHHCCCCEEEECCHHHHH
T ss_conf             974499999979458999


No 33 
>>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} (A:1-123,A:263-323)
Probab=85.84  E-value=2.7  Score=22.22  Aligned_cols=69  Identities=13%  Similarity=0.095  Sum_probs=40.0

Q ss_pred             CCCEEEEEECCCCHHHH-HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             86659999769850189-99999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    2 IRKNIVIFISGEGTNML-SLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~-~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      ||.|+++.  |.|+-.. .-+.+....  + ++..+++++.....-+.+++++++.+.-+              .+.+.+
T Consensus         1 MklkIaiI--G~G~ia~~~hlp~l~~~--~-~veivv~d~~~~~~~~~a~~~~i~~~~td--------------~eeLl~   61 (184)
T 1xea_A            1 MSLKIAXI--GLGDIAQKAYLPVLAQW--P-DIELVLCTRNPKVLGTLATRYRVSATCTD--------------YRDVLQ   61 (184)
T ss_dssp             -CEEEEEE--CCCHHHHHTHHHHHTTS--T-TEEEEEECSCHHHHHHHHHHTTCCCCCSS--------------TTGGGG
T ss_pred             CCEEEEEE--CCCHHHHHHHHHHHHHC--C-CCEEEEEECCHHHHHHHHHHCCCCCCCCC--------------HHHHHC
T ss_conf             93189999--58899999999999829--8-96899998999999999998399843188--------------999955


Q ss_pred             CCCEEEEEE
Q ss_conf             343036431
Q gi|254780570|r   81 IQPDLICLA   89 (205)
Q Consensus        81 ~~~Dliv~~   89 (205)
                      .++|+|+.+
T Consensus        62 ~~iDaV~I~   70 (184)
T 1xea_A           62 YGVDAVXIH   70 (184)
T ss_dssp             GCCSEEEEC
T ss_pred             CCCCEEEEE
T ss_conf             899999960


No 34 
>>2d13_A Hypothetical protein PH1257; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Pyrococcus horikoshii} (A:1-124)
Probab=85.35  E-value=2.9  Score=22.07  Aligned_cols=81  Identities=17%  Similarity=0.101  Sum_probs=47.0

Q ss_pred             CCCCEEEEEECCC-CHHH-HHHHHHHHCCCCCCEEEEEEECCC-----------C-CHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf             9866599997698-5018-999999973999847999997688-----------8-878889986089504630132332
Q gi|254780570|r    1 MIRKNIVIFISGE-GTNM-LSLIQATKKNDYPAEIVGVFSDNS-----------N-AQGLVKARKEKVPTFPIPYKDYIS   66 (205)
Q Consensus         1 M~k~riavl~SG~-Gsnl-~~Il~~~~~~~~~~eI~~Visn~~-----------d-a~~l~~a~~~~Ip~~~i~~~~~~~   66 (205)
                      |.++|+++++||+ .|.+ ..++..  .   ..++..+..+..           + ...-+.++..++|.+.++..+.. 
T Consensus         2 ~~~~kv~v~~SGG~DS~~~l~ll~~--~---g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~v~~~~~~-   75 (124)
T 2d13_A            2 VGLADVAVLYSGGKDSNYALYWALK--S---GLRVRYLVSMVSENEESYMYHTPNVELTSLQARALGIPIIKGFTKGEK-   75 (124)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHH--T---TCEEEEEEEEECCC---------CCTTHHHHHHHHTCCEEEEEC--CT-
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHH--C---CCEEEEEEEEECCCCCCEECCCCCHHHHHHHHHHCCCCCEEEECCCCC-
T ss_conf             8724199991686999999999998--5---982799999872889956054778999999998759993366246872-


Q ss_pred             CCCHHHHHHHHCCCCCCEEEEE
Q ss_conf             2101243210001234303643
Q gi|254780570|r   67 RREHEKAILMQLSSIQPDLICL   88 (205)
Q Consensus        67 ~~~~~~~l~~~l~~~~~Dliv~   88 (205)
                       ...-..+.+...+++.+.+++
T Consensus        76 -~~~~~~~~~~~~~~~~~~~~~   96 (124)
T 2d13_A           76 -EKEVEDLKNVLEGLKVDGIVA   96 (124)
T ss_dssp             -TSHHHHHHHHHHTBCCSEEEC
T ss_pred             -CHHHHHHHHHHHHHCCCEEEE
T ss_conf             -289999999999618865998


No 35 
>>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, transcription regulation, redox poise, DNA-binding, NAD, NADH; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A* (A:86-215)
Probab=84.43  E-value=0.86  Score=25.67  Aligned_cols=81  Identities=14%  Similarity=0.156  Sum_probs=46.6

Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCC----------CCCCCCHHHHH
Q ss_conf             59999769850189999999739998479999976888878889986089504630132----------33221012432
Q gi|254780570|r    5 NIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKD----------YISRREHEKAI   74 (205)
Q Consensus         5 riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~----------~~~~~~~~~~l   74 (205)
                      |++++  |.|...+.++++......++++++.+.+++...+.   +-.|+|........          .....+.-.++
T Consensus         2 ~vlI~--Gag~~g~~l~~~l~~~~~g~~vvGfiDd~~~~~g~---~i~g~~Vl~~~~~~~~i~~v~ia~~~~~~~~~~~i   76 (130)
T 2vt3_A            2 DVILI--GVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGT---EVGGVPVYNLDDLEQHVKDESVAILTVPAVAAQSI   76 (130)
T ss_dssp             CEEEE--CCSHHHHHHHHCC------CCEEEEEESCTTTTTC---EETTEEEEEGGGHHHHCSSCCEEEECSCHHHHHHH
T ss_pred             EEEEE--CCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCC---EECCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHH
T ss_conf             39998--68889999998763248996799998088687599---95574154288999999973955998251778999


Q ss_pred             HHHCCCCCCEEEEEEE
Q ss_conf             1000123430364311
Q gi|254780570|r   75 LMQLSSIQPDLICLAG   90 (205)
Q Consensus        75 ~~~l~~~~~Dliv~~g   90 (205)
                      .+.+.+...++.+.-.
T Consensus        77 ~~~l~~~gv~v~~~p~   92 (130)
T 2vt3_A           77 TDRLVALGIKGILNFT   92 (130)
T ss_dssp             HHHHHHTTCCEEEECS
T ss_pred             HHHHHHHCCCEEEECC
T ss_conf             9999981975662237


No 36 
>>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis} (A:)
Probab=84.35  E-value=3.2  Score=21.77  Aligned_cols=58  Identities=16%  Similarity=0.100  Sum_probs=36.8

Q ss_pred             CCCCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECCCC--C----HHHHHHHHCCCCEEEEECCC
Q ss_conf             9866599997698-50-189999999739998479999976888--8----78889986089504630132
Q gi|254780570|r    1 MIRKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDNSN--A----QGLVKARKEKVPTFPIPYKD   63 (205)
Q Consensus         1 M~k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~~d--a----~~l~~a~~~~Ip~~~i~~~~   63 (205)
                      |.++|++|++||+ .| .+..++..  .   ..++.+|..+...  .    ..-+.|+..+++...+....
T Consensus         1 m~~~~vvv~~SGG~DS~~~l~ll~~--~---g~~v~~v~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~   66 (219)
T 3bl5_A            1 MKKEKAIVVFSGGQDSTTCLLWALK--E---FEEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLDMSL   66 (219)
T ss_dssp             --CCEEEEECCSSHHHHHHHHHHHH--H---CSEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEECGG
T ss_pred             CCCCEEEEEECCCHHHHHHHHHHHH--C---CCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECHHH
T ss_conf             9987399996385899999999998--3---9918999987898873799999999998499658712466


No 37 
>>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} (A:1-133,A:305-362)
Probab=84.30  E-value=3.2  Score=21.76  Aligned_cols=74  Identities=15%  Similarity=0.014  Sum_probs=42.4

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             86659999769850189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      .+.|+++++  .|.-....+.++.... +++++.|.+..+ .....+++++++|....-+.      .    +-+.++..
T Consensus         5 ~~irvgIIG--~G~ig~~~~~al~~~~-~~eivaI~d~~~-e~a~~~a~~~~i~~~~~~~~------s----~e~ll~d~   70 (191)
T 1ydw_A            5 TQIRIGVXG--CADIARKVSRAIHLAP-NATISGVASRSL-EKAKAFATANNYPESTKIHG------S----YESLLEDP   70 (191)
T ss_dssp             -CEEEEEES--CCTTHHHHHHHHHHCT-TEEEEEEECSSH-HHHHHHHHHTTCCTTCEEES------S----HHHHHHCT
T ss_pred             CCCEEEEEC--CCHHHHHHHHHHHHCC-CCEEEEEECCCH-HHHHHHHHHHCCCCCCEECC------C----HHHHHCCC
T ss_conf             940899994--8599999999998589-988999986999-99999999849984355338------8----99995599


Q ss_pred             CCEEEEEE
Q ss_conf             43036431
Q gi|254780570|r   82 QPDLICLA   89 (205)
Q Consensus        82 ~~Dliv~~   89 (205)
                      ++|.|+.+
T Consensus        71 ~vD~V~Ia   78 (191)
T 1ydw_A           71 EIDALYVP   78 (191)
T ss_dssp             TCCEEEEC
T ss_pred             CCCEEEEE
T ss_conf             98889971


No 38 
>>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} (A:1-122)
Probab=83.93  E-value=2.7  Score=22.25  Aligned_cols=71  Identities=14%  Similarity=0.141  Sum_probs=41.5

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             65999976985018999999973999847999997688887888998608950463013233221012432100012343
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP   83 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~   83 (205)
                      ||+++.  |.|+-....+.+.... .+.+++.|+. +.....-+.+++++++...      .+       +-+.+...++
T Consensus         1 ~kvgii--G~G~~g~~~~~~l~~~-~~~~i~av~d-~~~~~~~~~~~~~~~~~~~------~d-------~~~l~~~~~i   63 (122)
T 2glx_A            1 NRWGLI--GASTIAREWVIGAIRA-TGGEVVSMMS-TSAERGAAYATENGIGKSV------TS-------VEELVGDPDV   63 (122)
T ss_dssp             CEEEEE--SCCHHHHHTHHHHHHH-TTCEEEEEEC-SCHHHHHHHHHHTTCSCCB------SC-------HHHHHTCTTC
T ss_pred             CCEEEE--CCHHHHHHHHHHHHHC-CCCEEEEEEC-CCHHHHHHHHHHHCCCCCC------CC-------HHHHHCCCCC
T ss_conf             949999--9849999999999738-9978999985-9999999999980999501------89-------9999559998


Q ss_pred             EEEEEEEE
Q ss_conf             03643112
Q gi|254780570|r   84 DLICLAGY   91 (205)
Q Consensus        84 Dliv~~g~   91 (205)
                      |+++.+.-
T Consensus        64 d~v~i~~~   71 (122)
T 2glx_A           64 DAVYVSTT   71 (122)
T ss_dssp             CEEEECSC
T ss_pred             CEEEEECC
T ss_conf             88999544


No 39 
>>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A (A:146-274)
Probab=83.81  E-value=3.3  Score=21.62  Aligned_cols=101  Identities=11%  Similarity=0.068  Sum_probs=55.5

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEC--CCCCHH----HHHHHHCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf             6659999769850189999999739998479999976--888878----8899860895046301323322101243210
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSD--NSNAQG----LVKARKEKVPTFPIPYKDYISRREHEKAILM   76 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn--~~da~~----l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~   76 (205)
                      .+|+++.+.+...-+.+++.....  ++.++..+...  .++...    .+.+++.|..+.....-            -+
T Consensus         3 g~kv~~vGd~~~rv~~S~~~~~~~--~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~------------~e   68 (129)
T 2i6u_A            3 GLRLSYFGDGANNMAHSLLLGGVT--AGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADA------------HA   68 (129)
T ss_dssp             TCEEEEESCTTSHHHHHHHHHHHH--TTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCH------------HH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHH--CCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECH------------HH
T ss_conf             988999679888601468988861--6934651477323477688887777775248742898411------------10


Q ss_pred             HCCCCCCEEEEEEEE-----------------EEECCCHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf             001234303643112-----------------220572132106654231353223332444
Q gi|254780570|r   77 QLSSIQPDLICLAGY-----------------MRLLSRDFVESYKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        77 ~l~~~~~Dliv~~g~-----------------~~il~~~~l~~~~~~~iN~HpslLP~yrG~  121 (205)
                      .++  +.|+|..-.|                 ...+..++++..+..++=+||  ||.+||.
T Consensus        69 a~~--~aDvvyt~~w~~~~~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~--LP~~Rg~  126 (129)
T 2i6u_A           69 AAA--GADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHC--LPAHRGD  126 (129)
T ss_dssp             HHT--TCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEEC--SCCCBTT
T ss_pred             CCC--CCEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECC--CCCCCCC
T ss_conf             135--960999721553110110134443321202249999725999699899--9986776


No 40 
>>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} (A:1-132,A:254-306)
Probab=83.13  E-value=2.9  Score=22.08  Aligned_cols=106  Identities=10%  Similarity=0.169  Sum_probs=53.0

Q ss_pred             CCCEEEEEECCCCH-----HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHH-------------HHHC-CCCEEEEECC
Q ss_conf             86659999769850-----189999999739998479999976888878889-------------9860-8950463013
Q gi|254780570|r    2 IRKNIVIFISGEGT-----NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVK-------------ARKE-KVPTFPIPYK   62 (205)
Q Consensus         2 ~k~riavl~SG~Gs-----nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~-------------a~~~-~Ip~~~i~~~   62 (205)
                      |.|||+||.||..+     .+.++++.....  ..+|.++.   ..-.++-.             .... |-..-.-..+
T Consensus         1 m~krI~IltsGGdaPGlNa~Ir~vv~~a~~~--g~~v~G~~---~G~~GL~~~~~~~l~~~~v~~i~~~GGt~LgtsR~~   75 (185)
T 1pfk_A            1 MIKKIGVLTSGGDAPGMNAAIRGVVRSALTE--GLEVMGIY---DGYLGLYEDRMVQLDRYSVSDMINRGGTFLGSARFP   75 (185)
T ss_dssp             CCCEEEEEECSSCCTTHHHHHHHHHHHHHHT--TCEEEEES---THHHHHHTTCEEEECSGGGTTCTTCCSCTTCCCCCG
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEC---CCHHHHCCCCEEECCHHHHHHHHHCCCCEECCCCCC
T ss_conf             9864999865888677899999999999877--99999991---667887279868689999977985799722477888


Q ss_pred             CCCCCCCHHHHHHHHCCCCCCEEEE-EEEEEEECCCHHHHCCCCCEEECCCC
Q ss_conf             2332210124321000123430364-31122205721321066542313532
Q gi|254780570|r   63 DYISRREHEKAILMQLSSIQPDLIC-LAGYMRLLSRDFVESYKNKILNIHPS  113 (205)
Q Consensus        63 ~~~~~~~~~~~l~~~l~~~~~Dliv-~~g~~~il~~~~l~~~~~~~iN~Hps  113 (205)
                      .+.+++.+ +++.+.+++++.|.++ .-|-...-....+..+...++.+=-+
T Consensus        76 ~~~~~~~~-~~~~~~l~~~~Id~LivIGGdgS~~~a~~L~e~gi~vvgiPkT  126 (185)
T 1pfk_A           76 EFRDENIR-AVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPCIGLPGT  126 (185)
T ss_dssp             GGGSHHHH-HHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEBC
T ss_pred             CCCCHHHH-HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             66657788-8999999976998899936936899999976436743312112


No 41 
>>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling, bifunctional enzyme; HET: NAD; 1.70A {Pseudomonas SP} (B:1-130,B:285-312)
Probab=82.74  E-value=3.7  Score=21.34  Aligned_cols=77  Identities=17%  Similarity=0.163  Sum_probs=42.8

Q ss_pred             CCC-CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             986-6599997698501899999997399984799999768888788899860895046301323322101243210001
Q gi|254780570|r    1 MIR-KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         1 M~k-~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      |++ .|+++.+.|+ ..-..++...+.. -.++++.|++-+++......+...+.+...-.+          +.+.+.+.
T Consensus         1 MskkikVgIIG~G~-~g~~~~~~~l~~~-~~~eivai~d~~~~~~~~~~~~~~~~~~~~~~~----------~d~~~~~~   68 (158)
T 1nvm_B            1 MNQKLKVAIIGSGN-IGTDLMIKVLRNA-KYLEMGAMVGIDAASDGLARAQRMGVTTTYAGV----------EGLIKLPE   68 (158)
T ss_dssp             CCSCEEEEEECCSH-HHHHHHHHHHHHC-SSEEEEEEECSCTTCHHHHHHHHTTCCEESSHH----------HHHHHSGG
T ss_pred             CCCCCEEEEECCCH-HHHHHHHHHHHCC-CCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCH----------HHHHCCCC
T ss_conf             99887399986879-9999999998459-996899998168254266777773996545641----------12201133


Q ss_pred             CCCCEEEEEE
Q ss_conf             2343036431
Q gi|254780570|r   80 SIQPDLICLA   89 (205)
Q Consensus        80 ~~~~Dliv~~   89 (205)
                      ..++|+++.+
T Consensus        69 ~~~vD~V~Ia   78 (158)
T 1nvm_B           69 FADIDFVFDA   78 (158)
T ss_dssp             GGGEEEEEEC
T ss_pred             CCCCCEEEEC
T ss_conf             4446889995


No 42 
>>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} (A:1-125)
Probab=82.55  E-value=2.7  Score=22.23  Aligned_cols=92  Identities=15%  Similarity=0.241  Sum_probs=52.3

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             65999976985018999999973999847999997688887888998608950463013233221012432100012343
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP   83 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~   83 (205)
                      +|+.|+  |+|--...++.+.+  ++++++.. +..++++.+...|.+    +..++..+       .+.+.+..++.++
T Consensus        12 kkilIi--G~G~~~~~l~~~a~--~~g~~~~~-~~~~~~~~~~~~ad~----~~~~~~~d-------~~~i~~~a~~~~v   75 (125)
T 1kjq_A           12 TRVMLL--GSGELGKEVAIECQ--RLGVEVIA-VDRYADAPAMHVAHR----SHVINMLD-------GDALRRVVELEKP   75 (125)
T ss_dssp             CEEEEE--SCSHHHHHHHHHHH--TTTCEEEE-EESSTTCGGGGGSSE----EEECCTTC-------HHHHHHHHHHHCC
T ss_pred             CEEEEE--CCCHHHHHHHHHHH--HCCCEEEE-EECCCCCCHHHHCCE----EEECCCCC-------HHHHHHHHHHHCC
T ss_conf             899998--97899999999999--87998999-979999826762550----68717889-------9999999998399


Q ss_pred             EEEEEEEEEEECCCHHHHCCCCCEEECCCC
Q ss_conf             036431122205721321066542313532
Q gi|254780570|r   84 DLICLAGYMRLLSRDFVESYKNKILNIHPS  113 (205)
Q Consensus        84 Dliv~~g~~~il~~~~l~~~~~~~iN~Hps  113 (205)
                      |.|+. ||. -++..++......-+.++||
T Consensus        76 d~v~~-~~~-~~~~~~~~~l~~~gi~vgps  103 (125)
T 1kjq_A           76 HYIVP-EIE-AIATDMLIQLEEEGLNVVPC  103 (125)
T ss_dssp             SEEEE-CSS-CSCHHHHHHHHHTTCEESSC
T ss_pred             CEEEC-CCC-CHHHHHHHHHHHCCCCCCCC
T ss_conf             99982-776-27489999999759834898


No 43 
>>1zh8_A Oxidoreductase; TM0312, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: MSE NAP; 2.50A {Thermotoga maritima MSB8} (A:1-143)
Probab=81.32  E-value=4.1  Score=20.99  Aligned_cols=75  Identities=20%  Similarity=0.033  Sum_probs=42.0

Q ss_pred             CCCCEEEEEECCCCHHHHH-HHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             9866599997698501899-999997399984799999768888788899860895046301323322101243210001
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLS-LIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~-Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      |-+.|++++  |.|+-... .....+...-.++++.|+.-++ ...-..+++++.+...-         .    +-+.+.
T Consensus        16 ~~~l~v~ii--G~G~~g~~~~~~~l~~~~~~~~i~av~d~~~-~~~~~~~~~~~~~~~~~---------~----~~~ll~   79 (143)
T 1zh8_A           16 LRKIRLGIV--GCGIAARELHLPALKNLSHLFEITAVTSRTR-SHAEEFAKXVGNPAVFD---------S----YEELLE   79 (143)
T ss_dssp             CCCEEEEEE--CCSHHHHHTHHHHHHTTTTTEEEEEEECSSH-HHHHHHHHHHSSCEEES---------C----HHHHHH
T ss_pred             CCCCEEEEE--CCCHHHHHHHHHHHHHCCCCEEEEEEECCCH-HHHHHHHHHCCCCCEEC---------C----HHHHHH
T ss_conf             668889999--4899999999999983899768999989999-99999999839984408---------8----999971


Q ss_pred             CCCCEEEEEEEE
Q ss_conf             234303643112
Q gi|254780570|r   80 SIQPDLICLAGY   91 (205)
Q Consensus        80 ~~~~Dliv~~g~   91 (205)
                      +.++|+++.+..
T Consensus        80 ~~~id~v~i~~~   91 (143)
T 1zh8_A           80 SGLVDAVDLTLP   91 (143)
T ss_dssp             SSCCSEEEECCC
T ss_pred             CCCCCEEEECCC
T ss_conf             887654642121


No 44 
>>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} (A:)
Probab=81.02  E-value=2  Score=23.11  Aligned_cols=79  Identities=11%  Similarity=0.058  Sum_probs=47.3

Q ss_pred             CCCCEEEEEECCCC--H-HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHH
Q ss_conf             98665999976985--0-18999999973999847999997688887888998608950463013233221012432100
Q gi|254780570|r    1 MIRKNIVIFISGEG--T-NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQ   77 (205)
Q Consensus         1 M~k~riavl~SG~G--s-nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~   77 (205)
                      |.++||.+.+.||-  | =+++|++....+.+.+.-.++-....+....+.+++.|++.-.     ..++...+      
T Consensus         1 M~~~~vlFvC~~N~~RS~mAEai~~~~~~~~~~v~SAG~~~~~~~p~~~~~l~~~gi~~~~-----~~s~~l~~------   69 (139)
T 1jl3_A            1 MENKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISN-----QTSDIIDS------   69 (139)
T ss_dssp             --CEEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSCCCCCHHHHHHHHHTTCCCTT-----CCCCBCCH------
T ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC-----CCCCCCCH------
T ss_conf             9978799984998168999999999846365113777777877780699999971867543-----45530567------


Q ss_pred             CCCCCCEEEEEEE
Q ss_conf             0123430364311
Q gi|254780570|r   78 LSSIQPDLICLAG   90 (205)
Q Consensus        78 l~~~~~Dliv~~g   90 (205)
                      -.-...|+|+...
T Consensus        70 ~~~~~~DlIi~m~   82 (139)
T 1jl3_A           70 DILNNADLVVTLC   82 (139)
T ss_dssp             HHHTTCSEEEECS
T ss_pred             HHHHCCCHHHHHC
T ss_conf             5503020667605


No 45 
>>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} (A:1-132)
Probab=80.55  E-value=4.3  Score=20.82  Aligned_cols=72  Identities=14%  Similarity=-0.029  Sum_probs=40.3

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      +.|+++.  |.|+-.+..+.......-+++++.|++-++ ......+++++++...-+             ..+.+...+
T Consensus         8 ~irvgii--G~G~~~~~~~~~~~~~~~~~~ivav~d~~~-~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~   71 (132)
T 3cea_A            8 PLRAAII--GLGRLGERHARHLVNKIQGVKLVAACALDS-NQLEWAKNELGVETTYTN-------------YKDXIDTEN   71 (132)
T ss_dssp             CEEEEEE--CCSTTHHHHHHHHHHTCSSEEEEEEECSCH-HHHHHHHHTTCCSEEESC-------------HHHHHTTSC
T ss_pred             CCEEEEE--CCHHHHHHHHHHHHHCCCCCEEEEEECCCH-HHHHHHHHHCCCCCCCCC-------------HHHHHCCCC
T ss_conf             8769998--882999999999986489968999983999-999999998299852599-------------999963889


Q ss_pred             CEEEEEEE
Q ss_conf             30364311
Q gi|254780570|r   83 PDLICLAG   90 (205)
Q Consensus        83 ~Dliv~~g   90 (205)
                      +|+++.+.
T Consensus        72 ~d~v~i~t   79 (132)
T 3cea_A           72 IDAIFIVA   79 (132)
T ss_dssp             CSEEEECS
T ss_pred             CCEEEECC
T ss_conf             88453023


No 46 
>>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} (A:1-130)
Probab=80.25  E-value=3  Score=21.96  Aligned_cols=40  Identities=15%  Similarity=0.191  Sum_probs=28.5

Q ss_pred             CCCCEEEEEECCCCH-------HHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf             986659999769850-------189999999739998479999976888
Q gi|254780570|r    1 MIRKNIVIFISGEGT-------NMLSLIQATKKNDYPAEIVGVFSDNSN   42 (205)
Q Consensus         1 M~k~riavl~SG~Gs-------nl~~Il~~~~~~~~~~eI~~Visn~~d   42 (205)
                      |+|+||+||+-|..+       .+.+++++....  ++++..|.-++..
T Consensus        20 ~~k~kI~vl~GG~S~EheVSl~SA~~v~~aL~~~--~y~v~~i~i~~~g   66 (130)
T 3e5n_A           20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQ--RFEPVLIGIDKQG   66 (130)
T ss_dssp             -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTT--TEEEEEEEECTTS
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH--CCEEEEEEECCCC
T ss_conf             4667799997968874899999999999975464--8979999986899


No 47 
>>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} (X:165-284)
Probab=79.05  E-value=2  Score=23.08  Aligned_cols=25  Identities=16%  Similarity=0.202  Sum_probs=19.1

Q ss_pred             ECCCHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf             0572132106654231353223332444
Q gi|254780570|r   94 LLSRDFVESYKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        94 il~~~~l~~~~~~~iN~HpslLP~yrG~  121 (205)
                      .+.+++++.-+. ++=+||  ||.+||.
T Consensus        93 ~v~~~ll~~~kd-~i~mHc--LP~~Rg~  117 (120)
T 1js1_X           93 TVGDRQMAVTNN-AYFMHC--LPVRRNM  117 (120)
T ss_dssp             SBCHHHHTTSSS-CEEECC--SCCCBTT
T ss_pred             CCCHHHHCCCCC-CEEECC--CCCCCCC
T ss_conf             145998747999-999799--9998887


No 48 
>>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} (A:1-145,A:408-458)
Probab=78.30  E-value=5.1  Score=20.35  Aligned_cols=75  Identities=19%  Similarity=0.189  Sum_probs=37.1

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             98665999976985018999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      |+++|++++.+|.  -...++++..... ..+| .|++ +.....-..++.++.+....+..+.       ..+.+.+  
T Consensus        21 ~~~~kVlIIGaG~--vg~~~~~~L~~~g-~~~I-~v~d-~~~~~a~~l~~~~~~~~~~~d~~~~-------~~l~~~~--   86 (196)
T 2axq_A           21 HMGKNVLLLGSGF--VAQPVIDTLAAND-DINV-TVAC-RTLANAQALAKPSGSKAISLDVTDD-------SALDKVL--   86 (196)
T ss_dssp             --CEEEEEECCST--THHHHHHHHHTST-TEEE-EEEE-SSHHHHHHHHGGGTCEEEECCTTCH-------HHHHHHH--
T ss_pred             CCCCEEEEECCCH--HHHHHHHHHHHCC-CCEE-EEEE-CCHHHHHHHHCCCCCCEEEEECCCH-------HHHHHHH--
T ss_conf             5788199989888--9999999998289-9349-9996-9999999986026983699847998-------9999986--


Q ss_pred             CCCEEEEEE
Q ss_conf             343036431
Q gi|254780570|r   81 IQPDLICLA   89 (205)
Q Consensus        81 ~~~Dliv~~   89 (205)
                      .++|+++.+
T Consensus        87 ~~~DiVI~~   95 (196)
T 2axq_A           87 ADNDVVISL   95 (196)
T ss_dssp             HTSSEEEEC
T ss_pred             CCCCEEEEC
T ss_conf             189999999


No 49 
>>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} (A:1-119,A:270-304)
Probab=78.09  E-value=5.2  Score=20.31  Aligned_cols=38  Identities=26%  Similarity=0.379  Sum_probs=27.0

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             98665999976985018999999973999847999997688
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      |.+.|+++.  |.|.--+..++.+.... +++++.|+.-++
T Consensus         1 Mk~ikVgiI--G~G~iG~~~~~~l~~~~-~~eiVav~d~~~   38 (154)
T 1f06_A            1 MTNIRVAIV--GYGNLGRSVEKLIAKQP-DMDLVGIFSRRA   38 (154)
T ss_dssp             CCCEEEEEE--CCSHHHHHHHHHHTTCS-SEEEEEEEESSS
T ss_pred             CCCCEEEEE--CCCHHHHHHHHHHHHCC-CCEEEEEEECCH
T ss_conf             971079998--95899999999997399-979999997776


No 50 
>>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A* (A:1-105,A:237-273)
Probab=77.95  E-value=3  Score=21.95  Aligned_cols=99  Identities=15%  Similarity=0.114  Sum_probs=55.4

Q ss_pred             CCCEEEEEECCCCH--HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             86659999769850--1899999997399984799999768888788899860895046301323322101243210001
Q gi|254780570|r    2 IRKNIVIFISGEGT--NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         2 ~k~riavl~SG~Gs--nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      .++.|+||=||-|.  -++.|.+...    ..++ ..+.|++.           +|+-.   +....-..+-.++.+.+.
T Consensus        11 ~~~~IGIfDSGiGgLavl~~i~~~~p----~~~~-iyv~D~~~-----------~PYG~---ks~e~i~~~~~~~~~~L~   71 (142)
T 2oho_A           11 DTRPIGFLDSGVGGLTVVCELIRQLP----HEKI-VYIGDSAR-----------APYGP---RPKKQIKEYTWELVNFLL   71 (142)
T ss_dssp             CCCCEEEEESSSTTHHHHHHHHHHCT----TCCE-EEEECGGG-----------CCCTT---SCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHCC----CCCE-EEEECCCC-----------CCCCC---CCHHHHHHHHHHHHHHHH
T ss_conf             99978999789777999999999789----9999-99946889-----------99899---999999999999999998


Q ss_pred             CCCCEEEEEE-EEEE-ECCCHHHHCCCCCEEECCCCCCCCCC
Q ss_conf             2343036431-1222-05721321066542313532233324
Q gi|254780570|r   80 SIQPDLICLA-GYMR-LLSRDFVESYKNKILNIHPSLLPLFP  119 (205)
Q Consensus        80 ~~~~Dliv~~-g~~~-il~~~~l~~~~~~~iN~HpslLP~yr  119 (205)
                      +.++|++|.+ .-.. ..-+.+-+.++..+||+=|.--|+.|
T Consensus        72 ~~g~~~IVIACNTAsa~~ld~Lr~~~~iPiI~iV~~~~~~~~  113 (142)
T 2oho_A           72 TQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVHQKAVEHR  113 (142)
T ss_dssp             TTTCSEEEECCHHHHHHHHHHHHHHCSSCEEESHTCCCCCCE
T ss_pred             HCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCEE
T ss_conf             557875999615788763787764046764642358986629


No 51 
>>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis tohama I, structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis} (A:119-288)
Probab=77.74  E-value=5.3  Score=20.24  Aligned_cols=86  Identities=12%  Similarity=0.036  Sum_probs=46.3

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC-CHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             6659999769850189999999739998479999976888-878889986089504630132332210124321000123
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSN-AQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~d-a~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      ++|++|+  |.|.=.+..+++.... .+.+.+.|+.-.++ +...+.+++++.+...-+             +.+.+.+.
T Consensus         3 ~~ki~iI--G~G~~g~~~~~~l~~~-~~~~~v~v~~r~~~~a~a~~~~~~~~~~~~~~~-------------~~~~~~~~   66 (170)
T 3hdj_A            3 SSVLGLF--GAGTQGAEHAAQLSAR-FALEAILVHDPYASPEILERIGRRCGVPARXAA-------------PADIAAQA   66 (170)
T ss_dssp             CCEEEEE--CCSHHHHHHHHHHHHH-SCCCEEEEECTTCCHHHHHHHHHHHTSCEEECC-------------HHHHHHHC
T ss_pred             CCEEEEE--CCCHHHHHHHHHHHHH-CCHHHHEEEHHHHHHHHHHHHHHHCCCCEEECC-------------HHHHHHHC
T ss_conf             7569997--4726689999999852-554531210201119999998743597079778-------------79998637


Q ss_pred             CCEEEEEEEEEEECCCHHHHCCC
Q ss_conf             43036431122205721321066
Q gi|254780570|r   82 QPDLICLAGYMRLLSRDFVESYK  104 (205)
Q Consensus        82 ~~Dliv~~g~~~il~~~~l~~~~  104 (205)
                      ++|.++.......+....+..-+
T Consensus        67 dv~~v~~~~~~~~~~~~~~~a~~   89 (170)
T 3hdj_A           67 DIVVTATRSTTPLFAGQALRAGA   89 (170)
T ss_dssp             SEEEECCCCSSCSSCGGGCCTTC
T ss_pred             CEEEEECCCCCCCCCHHCCCCCC
T ss_conf             55577426799854130178877


No 52 
>>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} (A:1-150)
Probab=76.69  E-value=5.6  Score=20.05  Aligned_cols=59  Identities=10%  Similarity=0.122  Sum_probs=29.3

Q ss_pred             CCC-CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEE
Q ss_conf             986-659999769850189999999739998479999976888878889986089504630
Q gi|254780570|r    1 MIR-KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIP   60 (205)
Q Consensus         1 M~k-~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~   60 (205)
                      ||+ .|++++.+| |+-....+...........++.+..-+........+.....+...+.
T Consensus         1 mm~~i~v~iiG~~-G~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   60 (150)
T 1r0k_A            1 MSQPRTVTVLGAT-GSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIA   60 (150)
T ss_dssp             -CCCEEEEEETTT-SHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEES
T ss_pred             CCCCCEEEEECCC-CHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEC
T ss_conf             9998889998868-79889999999839677279999938989999999998399999990


No 53 
>>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} (A:)
Probab=76.07  E-value=4.5  Score=20.72  Aligned_cols=37  Identities=16%  Similarity=0.124  Sum_probs=26.5

Q ss_pred             CCCEEEEEECCCCHHHH--HHHHHHHCCCCCCEEEEEEECC
Q ss_conf             86659999769850189--9999997399984799999768
Q gi|254780570|r    2 IRKNIVIFISGEGTNML--SLIQATKKNDYPAEIVGVFSDN   40 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~--~Il~~~~~~~~~~eI~~Visn~   40 (205)
                      |+||+.+.+||.++..+  .+++..+.  .++++..|+|..
T Consensus         1 M~k~ili~itGs~~~~~~~~~i~~L~~--~~~~v~vv~t~~   39 (181)
T 1g63_A            1 MYGKLLICATASINVININHYIVELKQ--HFDEVNILFSPS   39 (181)
T ss_dssp             CCCCEEEEECSCGGGGGHHHHHHHHTT--TSSCEEEEECGG
T ss_pred             CCCEEEEEEEHHHHHHHHHHHHHHHHH--CCCEEEEEECHH
T ss_conf             997399998508999999999999998--899699998155


No 54 
>>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesis, isomerase; HET: DGL; 1.75A {Bacillus subtilis} (A:1-96,A:209-272)
Probab=75.73  E-value=4.7  Score=20.56  Aligned_cols=70  Identities=20%  Similarity=0.239  Sum_probs=36.5

Q ss_pred             CCCCEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             98665999976985--0189999999739998479999976888878889986089504630132332210124321000
Q gi|254780570|r    1 MIRKNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL   78 (205)
Q Consensus         1 M~k~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l   78 (205)
                      |++..|+||=||-|  |-++.|.+..     +.+-..-+.|+.           ++|+=.-+   ...-..+-.++.+.+
T Consensus         1 M~~~~IgifDSGiGGLtv~~~i~~~l-----P~e~~iy~~D~~-----------~~PYG~ks---~~~i~~~~~~~~~~l   61 (160)
T 1zuw_A            1 MLEQPIGVIDSGVGGLTVAKEIMRQL-----PKENIIYVGDTK-----------RCPYGPRP---EEEVLQYTWELTNYL   61 (160)
T ss_dssp             CTTSCEEEEESSSTTHHHHHHHHHHS-----TTCCEEEEECGG-----------GCCCSSSC---HHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHC-----CCCCEEEEECCC-----------CCCCCCCC---HHHHHHHHHHHHHHH
T ss_conf             99998899988976899999999978-----999889995688-----------99989899---999999999999998


Q ss_pred             -CCCCCEEEEEE
Q ss_conf             -12343036431
Q gi|254780570|r   79 -SSIQPDLICLA   89 (205)
Q Consensus        79 -~~~~~Dliv~~   89 (205)
                       ++++++++|.|
T Consensus        62 ~~~~~~~~iViA   73 (160)
T 1zuw_A           62 LENHHIKMLVIA   73 (160)
T ss_dssp             HHHSCCSEEEEC
T ss_pred             HHCCCCCEEEEC
T ss_conf             633698299982


No 55 
>>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide formyl transferase; purine ribonucleotide biosynthesis, PURT; HET: ADP; 1.70A {Pyrococcus horikoshii OT3} PDB: 2czg_A* (A:1-108)
Probab=74.67  E-value=6.3  Score=19.70  Aligned_cols=83  Identities=16%  Similarity=0.238  Sum_probs=49.8

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      .+|+.|+  |+|-....++.+.+.  +++++.. +..++++.+...|.+    ++..++.+       .+.+.+..++.+
T Consensus        19 ~~kilIl--G~Gqla~~l~~aa~~--lG~~~~~-~d~~~~~pa~~~ad~----~~~~~~~D-------~~~i~~~a~~~~   82 (108)
T 2dwc_A           19 AQKILLL--GSGELGKEIAIEAQR--LGVEVVA-VDRYANAPAMQVAHR----SYVGNMMD-------KDFLWSVVEREK   82 (108)
T ss_dssp             CCEEEEE--SCSHHHHHHHHHHHH--TTCEEEE-EESSTTCHHHHHSSE----EEESCTTC-------HHHHHHHHHHHC
T ss_pred             CCEEEEE--CCCHHHHHHHHHHHH--CCCEEEE-EECCCCCCHHHHCCE----EEECCCCC-------HHHHHHHHHHCC
T ss_conf             8899999--978999999999998--7998999-979898857774565----89789999-------999999998739


Q ss_pred             CEEEEEEEEEEECCCHHHHCC
Q ss_conf             303643112220572132106
Q gi|254780570|r   83 PDLICLAGYMRLLSRDFVESY  103 (205)
Q Consensus        83 ~Dliv~~g~~~il~~~~l~~~  103 (205)
                      +|.|.. +|. -++.++++..
T Consensus        83 ~D~I~~-e~e-~i~~~~~~~~  101 (108)
T 2dwc_A           83 PDAIIP-EIE-AINLDALFEF  101 (108)
T ss_dssp             CSEEEE-CSS-CSCHHHHHHH
T ss_pred             CCEEEE-CCC-CCCHHHHHHH
T ss_conf             999996-888-7578999999


No 56 
>>2ef0_A Ornithine carbamoyltransferase; TTHA1199, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus HB8} (A:152-270)
Probab=74.45  E-value=3.2  Score=21.73  Aligned_cols=26  Identities=15%  Similarity=0.253  Sum_probs=21.2

Q ss_pred             ECCCHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf             0572132106654231353223332444
Q gi|254780570|r   94 LLSRDFVESYKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        94 il~~~~l~~~~~~~iN~HpslLP~yrG~  121 (205)
                      .+.+++++..+..++=+||  ||.+||.
T Consensus        91 ~vt~~~l~~a~~~aivmH~--LP~~Rg~  116 (119)
T 2ef0_A           91 QVNGELLKLLRPEGVFLHC--LPAHYGE  116 (119)
T ss_dssp             CBCHHHHTTSCTTCEEEEC--SCCCBTT
T ss_pred             CCCHHHHHHCCCCCEEECC--CCCCCCC
T ss_conf             0319999717999899799--9998997


No 57 
>>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} (A:1-176,A:396-479)
Probab=73.59  E-value=6.7  Score=19.52  Aligned_cols=76  Identities=11%  Similarity=0.009  Sum_probs=43.3

Q ss_pred             CCEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             665999976985--018999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    3 RKNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         3 k~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      +.|+++.+-|++  ......+.+.....-.++|++|++.++ ....+.++++++|...+    +.+       +-+.++.
T Consensus        39 pIrVgIIG~G~~g~~~~~~hl~al~~~~~~~eIvaI~d~~~-e~a~~~ae~~g~~~~~~----y~d-------~eell~~  106 (260)
T 2nvw_A           39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTL-KSSLQTIEQLQLKHATG----FDS-------LESFAQY  106 (260)
T ss_dssp             CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCH-HHHHHHHHHTTCTTCEE----ESC-------HHHHHHC
T ss_pred             CEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCH-HHHHHHHHHHCCCCCCC----CCC-------HHHHHCC
T ss_conf             70799993798864799999999981798879999987999-99999999849897645----699-------9999649


Q ss_pred             CCCEEEEEEE
Q ss_conf             3430364311
Q gi|254780570|r   81 IQPDLICLAG   90 (205)
Q Consensus        81 ~~~Dliv~~g   90 (205)
                      -++|+|+.+.
T Consensus       107 ~~vD~VvIaT  116 (260)
T 2nvw_A          107 KDIDMIVVSV  116 (260)
T ss_dssp             TTCSEEEECS
T ss_pred             CCCCEEEEEC
T ss_conf             9989899958


No 58 
>>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} (B:32-62,B:311-519)
Probab=73.19  E-value=6.8  Score=19.46  Aligned_cols=85  Identities=16%  Similarity=0.144  Sum_probs=49.5

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHH----HHHHC--CCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf             665999976985018999999973999847999997688887888----99860--895046301323322101243210
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLV----KARKE--KVPTFPIPYKDYISRREHEKAILM   76 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~----~a~~~--~Ip~~~i~~~~~~~~~~~~~~l~~   76 (205)
                      .||++|.  |.++-+..+.+...+  +..+++++.+...+....+    ..+..  +....++...+       ..++.+
T Consensus        81 Gkrv~I~--g~~~~~~~l~~~L~E--lGm~vv~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~d-------~~e~~~  149 (240)
T 1qgu_B           81 GKKFGLY--GDPDFVMGLTRFLLE--LGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVFINCD-------LWHFRS  149 (240)
T ss_dssp             TCEEEEE--SCHHHHHHHHHHHHH--TTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEEESCC-------HHHHHH
T ss_pred             CCEEEEE--CCCHHHHHHHHHHHH--CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCC-------HHHHHH
T ss_conf             9779998--982889999999998--79955698637998789999999987476788877996899-------999999


Q ss_pred             HCCCCCCEEEEEEEEEEECCCH
Q ss_conf             0012343036431122205721
Q gi|254780570|r   77 QLSSIQPDLICLAGYMRLLSRD   98 (205)
Q Consensus        77 ~l~~~~~Dliv~~g~~~il~~~   98 (205)
                      .+++.+|||++..++.+.+..+
T Consensus       150 ~i~~~~pDLiigss~e~~~a~~  171 (240)
T 1qgu_B          150 LMFTRQPDFMIGNSYGKFIQRD  171 (240)
T ss_dssp             HHHHHCCSEEEECGGGHHHHHH
T ss_pred             HHHHCCCCEEEECCCHHHHHHH
T ss_conf             9862699999978620555465


No 59 
>>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A (A:1-148,A:302-364)
Probab=72.94  E-value=6.9  Score=19.42  Aligned_cols=85  Identities=21%  Similarity=0.176  Sum_probs=41.4

Q ss_pred             CCCCEEEEEECCCCH-----HHHHHHHH-HHCCCCC-CEEEEEEECCCCCHHH--------------HHHHHCCCCEEEE
Q ss_conf             986659999769850-----18999999-9739998-4799999768888788--------------8998608950463
Q gi|254780570|r    1 MIRKNIVIFISGEGT-----NMLSLIQA-TKKNDYP-AEIVGVFSDNSNAQGL--------------VKARKEKVPTFPI   59 (205)
Q Consensus         1 M~k~riavl~SG~Gs-----nl~~Il~~-~~~~~~~-~eI~~Visn~~da~~l--------------~~a~~~~Ip~~~i   59 (205)
                      |.++|++|+.||.-+     .+..+++. ...+ .. .+|.+..   ..-.|+              ....-..-|--.+
T Consensus         1 M~~kni~I~~sGG~tpgiNasi~gvv~~a~~~~-~~v~~iyG~~---~G~~GLl~~~~~dl~~~~~~~~~~l~~tpGs~L   76 (211)
T 3hno_A            1 MAAKNAFYAQSGGVTAVINASAAGVIEAARKQS-GKIGRIYAGR---NGIIGALTEDLIDTGQESDAAISALRYTPSGAF   76 (211)
T ss_dssp             -CCCEEEEEECSSCCSSHHHHHHHHHHHHHHHC-SSCCCEEEET---TTHHHHHTTCEEEGGGSCHHHHHHGGGCCSCTT
T ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCC-CCEEEEEEEC---CCCHHHHCCCCEECCCCCHHHHHHHCCCCCCCC
T ss_conf             997648998888825889799999999999839-9487997673---582235548837786024777877525797645


Q ss_pred             E---CC---CCCCCCCHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             0---13---2332210124321000123430364311
Q gi|254780570|r   60 P---YK---DYISRREHEKAILMQLSSIQPDLICLAG   90 (205)
Q Consensus        60 ~---~~---~~~~~~~~~~~l~~~l~~~~~Dliv~~g   90 (205)
                      -   .+   ...+++.+ +++++.+++++.|.++..|
T Consensus        77 GS~R~kl~~~~~~~~~~-~~i~~~l~k~~I~~li~IG  112 (211)
T 3hno_A           77 GSCRYKLKSLEQNRREY-ERLIEVFKAHDIGYFFYNG  112 (211)
T ss_dssp             CCCCCC------CHHHH-HHHHHHHHHTTEEEEEEEE
T ss_pred             CCCCCCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEC
T ss_conf             77788877653235799-9999999982998799972


No 60 
>>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; reductive methylation, structural genomics, PSI 2, protein structure initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A (A:1-123)
Probab=72.72  E-value=7  Score=19.39  Aligned_cols=69  Identities=16%  Similarity=0.168  Sum_probs=39.7

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             65999976985018999999973999847999997688887888998608950463013233221012432100012343
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP   83 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~   83 (205)
                      .|+++.  |.|.-....+.+..... +.+++.|++.+ ....-+.++.++++.+.-              ..+.+.+.++
T Consensus         2 ikv~ii--G~G~~g~~~~~~l~~~~-~~~i~av~d~~-~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~   63 (123)
T 2ho3_A            2 LKLGVI--GTGAISHHFIEAAHTSG-EYQLVAIYSRK-LETAATFASRYQNIQLFD--------------QLEVFFKSSF   63 (123)
T ss_dssp             EEEEEE--CCSHHHHHHHHHHHHTT-SEEEEEEECSS-HHHHHHHGGGSSSCEEES--------------CHHHHHTSSC
T ss_pred             CEEEEE--CCCHHHHHHHHHHHHCC-CCEEEEEECCC-HHHHHHHHHHCCCCCCCC--------------HHHHHHCCCC
T ss_conf             199999--98499999999998688-91899998899-999999999849985368--------------7999847999


Q ss_pred             EEEEEEE
Q ss_conf             0364311
Q gi|254780570|r   84 DLICLAG   90 (205)
Q Consensus        84 Dliv~~g   90 (205)
                      |+++.+.
T Consensus        64 d~v~i~t   70 (123)
T 2ho3_A           64 DLVYIAS   70 (123)
T ss_dssp             SEEEECS
T ss_pred             CEEECCC
T ss_conf             8000023


No 61 
>>1tlt_A Putative oxidoreductase (virulence factor MVIM homolog); structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} (A:1-126,A:262-319)
Probab=72.17  E-value=7.2  Score=19.30  Aligned_cols=53  Identities=13%  Similarity=0.154  Sum_probs=32.7

Q ss_pred             CCCCEEEEEECCCCHHHHH-HHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEE
Q ss_conf             9866599997698501899-99999739998479999976888878889986089504
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLS-LIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTF   57 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~-Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~   57 (205)
                      |-|.|+++.  |-|+-... .+.+.+.. -+.+++++++.+++ .+...++++++|++
T Consensus         3 mkkiRVgiI--GlG~ia~~~~l~~L~~~-~~~~ivgi~d~~~e-ka~~~~~~~~i~~~   56 (184)
T 1tlt_A            3 LKKLRIGVV--GLGGIAQKAWLPVLAAA-SDWTLQGAWSPTRA-KALPICESWRIPYA   56 (184)
T ss_dssp             --CEEEEEE--CCSTHHHHTHHHHHHSC-SSEEEEEEECSSCT-THHHHHHHHTCCBC
T ss_pred             CCCCEEEEE--ECCHHHHHHHHHHHHHC-CCCEEEEEECCCHH-HHHHHHHHHCCCCC
T ss_conf             878889999--59999999999999838-99689999879999-99999998199834


No 62 
>>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3btu_A (A:1-156,A:361-438)
Probab=72.10  E-value=7.2  Score=19.29  Aligned_cols=76  Identities=12%  Similarity=0.073  Sum_probs=42.0

Q ss_pred             CCCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             866599997698-50-1899999997399984799999768888788899860895046301323322101243210001
Q gi|254780570|r    2 IRKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         2 ~k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      .+.|+++.+.|+ |+ -....+.+.....-.++++.|+. +....+.+.+++++++...+    +.+       +-+.++
T Consensus        19 ~plRVgiIG~G~~g~~~~~~hl~al~~~~~~~eIvaV~D-~~~e~a~~~a~~~gi~~~~~----~td-------~eell~   86 (234)
T 3btv_A           19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYS-PKIETSIATIQRLKLSNATA----FPT-------LESFAS   86 (234)
T ss_dssp             CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEEC-SSHHHHHHHHHHTTCTTCEE----ESS-------HHHHHH
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEC-CCHHHHHHHHHHHCCCCCEE----CCC-------HHHHHC
T ss_conf             983799993686443899999999985699828999986-99999999999848998703----599-------999955


Q ss_pred             CCCCEEEEEE
Q ss_conf             2343036431
Q gi|254780570|r   80 SIQPDLICLA   89 (205)
Q Consensus        80 ~~~~Dliv~~   89 (205)
                      ..++|+++.+
T Consensus        87 ~~~vD~VvI~   96 (234)
T 3btv_A           87 SSTIDMIVIA   96 (234)
T ss_dssp             CSSCSEEEEC
T ss_pred             CCCCCEEEEE
T ss_conf             9999899993


No 63 
>>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} (A:1-46,A:286-533)
Probab=72.05  E-value=2.1  Score=22.96  Aligned_cols=81  Identities=7%  Similarity=0.033  Sum_probs=43.3

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             65999976985018999999973999847999997688887888998608950463013233221012432100012343
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP   83 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~   83 (205)
                      ||++|+  |.|+-.-.+.+...  ++..+++++.|.......-++.+...-...++...+.       .++.+.+...+|
T Consensus        97 Krv~I~--~~~~~a~~l~~~L~--ELGmevv~~~~~~~~~~~~e~~~~l~~~~~i~~~~d~-------~ei~~~i~~~~p  165 (294)
T 1mio_A           97 KTACLY--VGGSRSHTYMNMLK--SFGVDSLVAGFEFAHRDDYEGREVIPTIKIDADSKNI-------PEITVTPDEQKY  165 (294)
T ss_dssp             CEEEEE--ESSSHHHHHHHHHH--HHTCEEEEEEESSCCHHHHHCGGGTTTCCCCSSCCCC-------CCCCCCCCSSSC
T ss_pred             CEEEEE--CCCHHHHHHHHHHH--HCCCEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCC-------CCCCCCCCCHHC
T ss_conf             779997--78547999999999--8699699863111452145433102210000012342-------100145420000


Q ss_pred             EEEEEEEEEEEC
Q ss_conf             036431122205
Q gi|254780570|r   84 DLICLAGYMRLL   95 (205)
Q Consensus        84 Dliv~~g~~~il   95 (205)
                      ||++.-++.+-+
T Consensus       166 dLiig~~~e~~l  177 (294)
T 1mio_A          166 RVVIPEDKVEEL  177 (294)
T ss_dssp             CCSSCTHHHHHH
T ss_pred             CCCCCHHHHHHH
T ss_conf             234404556666


No 64 
>>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043} (A:1-127)
Probab=71.91  E-value=7.3  Score=19.26  Aligned_cols=71  Identities=18%  Similarity=0.097  Sum_probs=38.9

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      +.|+++...|+  -....+.+.... .+++++.|++.+++ ..-..+++++.+...      .+       +-+.+...+
T Consensus         4 ~irv~iiG~G~--~g~~~~~~l~~~-~~~~iv~v~d~~~~-~~~~~~~~~~~~~~~------~~-------~~~~~~~~~   66 (127)
T 2p2s_A            4 KIRFAAIGLAH--NHIYDXCQQLID-AGAELAGVFESDSD-NRAKFTSLFPSVPFA------AS-------AEQLITDAS   66 (127)
T ss_dssp             CCEEEEECCSS--THHHHHHHHHHH-TTCEEEEEECSCTT-SCHHHHHHSTTCCBC------SC-------HHHHHTCTT
T ss_pred             CCEEEEECCCH--HHHHHHHHHHHC-CCCEEEEEECCCHH-HHHHHHHHCCCCCEE------CC-------HHHHHCCCC
T ss_conf             07799990888--899999998751-89889999899999-999999877998568------98-------999954999


Q ss_pred             CEEEEEEE
Q ss_conf             30364311
Q gi|254780570|r   83 PDLICLAG   90 (205)
Q Consensus        83 ~Dliv~~g   90 (205)
                      +|+++.+.
T Consensus        67 ~d~v~i~t   74 (127)
T 2p2s_A           67 IDLIACAV   74 (127)
T ss_dssp             CCEEEECS
T ss_pred             CCEEEEEC
T ss_conf             89899842


No 65 
>>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A (A:1-125)
Probab=70.73  E-value=7.7  Score=19.09  Aligned_cols=71  Identities=15%  Similarity=0.122  Sum_probs=41.5

Q ss_pred             CCEEEEEECCC-CHH-HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             66599997698-501-8999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    3 RKNIVIFISGE-GTN-MLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         3 k~riavl~SG~-Gsn-l~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      ..|+++.+.|. |+. +..++    ...-.++++.|++.++ ...-..+++++++..+-      +       +-+.+.+
T Consensus         2 ~iri~iiG~G~~g~~~~~~~~----~~~~~~~lvai~d~~~-~~~~~~~~~~~~~~~~~------~-------~~~l~~~   63 (125)
T 3i23_A            2 TVKXGFIGFGKSANRYHLPYV----XIRETLEVKTIFDLHV-NEKAAAPFKEKGVNFTA------D-------LNELLTD   63 (125)
T ss_dssp             CEEEEEECCSHHHHHTTHHHH----TTCTTEEEEEEECTTC-CHHHHHHHHTTTCEEES------C-------THHHHSC
T ss_pred             CEEEEEECCCHHHHHHHHHHH----HCCCCCEEEEEEECCH-HHHHHHHHHCCCCCEEC------C-------HHHHHCC
T ss_conf             315999989399999999999----6198978999990999-99999985548993569------9-------9999659


Q ss_pred             CCCEEEEEEEE
Q ss_conf             34303643112
Q gi|254780570|r   81 IQPDLICLAGY   91 (205)
Q Consensus        81 ~~~Dliv~~g~   91 (205)
                      .++|+++.+..
T Consensus        64 ~~~d~v~i~t~   74 (125)
T 3i23_A           64 PEIELITICTP   74 (125)
T ss_dssp             TTCCEEEECSC
T ss_pred             CCCCEEEECCC
T ss_conf             99888998788


No 66 
>>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8} (A:58-227)
Probab=70.50  E-value=5.8  Score=19.96  Aligned_cols=13  Identities=23%  Similarity=0.422  Sum_probs=6.4

Q ss_pred             CEEECCCCCCCCC
Q ss_conf             4231353223332
Q gi|254780570|r  106 KILNIHPSLLPLF  118 (205)
Q Consensus       106 ~~iN~HpslLP~y  118 (205)
                      +++.++++.=|+|
T Consensus       142 ~~~~~~~~vGgR~  154 (170)
T 2q8n_A          142 RSLEVPPGVGGRF  154 (170)
T ss_dssp             EEEECCTTCCGGG
T ss_pred             HHHHCCCCCCCHH
T ss_conf             7763355444101


No 67 
>>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, thermus themophilus; HET: NAD; 2.16A {Thermus thermophilus HB8} (A:78-188)
Probab=70.48  E-value=2.2  Score=22.81  Aligned_cols=68  Identities=16%  Similarity=0.076  Sum_probs=38.6

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      +.|+++.  |.|.-...++++.+.. -++++++|+..+++.. ...++.++++.+       .+        .+.+...+
T Consensus         3 ~irv~ii--G~G~~g~~~~~~l~~~-~~~~i~av~d~~~~~~-~~~~~~~~~~~~-------~~--------~~~~~~~~   63 (111)
T 2dt5_A            3 KWGLCIV--GMGRLGSALADYPGFG-ESFELRGFFDVDPEKV-GRPVRGGVIEHV-------DL--------LPQRVPGR   63 (111)
T ss_dssp             CEEEEEE--CCSHHHHHHHHCSCCC-SSEEEEEEEESCTTTT-TCEETTEEEEEG-------GG--------HHHHSTTT
T ss_pred             CCEEEEE--CCCHHHHHHHHHHHHC-CCCEEEEEECCCHHHC-CCEECCEEECCH-------HH--------HHHHHHHC
T ss_conf             8439998--8888999999857644-6935999984996881-987798896145-------88--------99999827


Q ss_pred             CEEEEEE
Q ss_conf             3036431
Q gi|254780570|r   83 PDLICLA   89 (205)
Q Consensus        83 ~Dliv~~   89 (205)
                      +|+++.+
T Consensus        64 ~D~v~i~   70 (111)
T 2dt5_A           64 IEIALLT   70 (111)
T ss_dssp             CCEEEEC
T ss_pred             CCEEEEE
T ss_conf             7099981


No 68 
>>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii OT3} (A:)
Probab=69.53  E-value=8.2  Score=18.92  Aligned_cols=58  Identities=17%  Similarity=0.218  Sum_probs=36.3

Q ss_pred             CCEEEEEECCCCHHHHHHHH-HHHCCCCCCEEEEEEECCCCCHHHHHHH---HCCCCEEEEECC
Q ss_conf             66599997698501899999-9973999847999997688887888998---608950463013
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQ-ATKKNDYPAEIVGVFSDNSNAQGLVKAR---KEKVPTFPIPYK   62 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~-~~~~~~~~~eI~~Visn~~da~~l~~a~---~~~Ip~~~i~~~   62 (205)
                      +..-.||.-|+.+.++.++. +.++++ +.++. |.-.+|...|...|+   +.|||+..++-.
T Consensus       108 ~~~~~ILT~~~S~~V~~~l~~a~~~~~-~~~v~-V~EsrP~~eG~~la~~L~~~gi~vt~i~ds  169 (276)
T 1vb5_A          108 DDGDVIITHSFSSTVLEIIRTAKERKK-RFKVI-LTESSPDYEGLHLARELEFSGIEFEVITDA  169 (276)
T ss_dssp             CTTEEEECCSCCHHHHHHHHHHHHTTC-CEEEE-EECCTTTTHHHHHHHHHHHTTCCEEEECGG
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCCC-CEEEE-EECCCCCCCCHHHHHHHHHCCCCEEEECHH
T ss_conf             999889971833899999999998799-66999-973776556589999999719833895556


No 69 
>>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} (A:183-413)
Probab=69.12  E-value=8.4  Score=18.86  Aligned_cols=56  Identities=9%  Similarity=0.132  Sum_probs=33.5

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCC---CC----HHHHHHHHCCCCEEEEECC
Q ss_conf             66599997698-5018999999973999847999997688---88----7888998608950463013
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNS---NA----QGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~---da----~~l~~a~~~~Ip~~~i~~~   62 (205)
                      .+|++|++||+ .|.+.+.+ +.+   ...++.++..|..   ..    ...+.|+..+++.+.++..
T Consensus         5 ~~kvvv~~SGG~DS~~ll~l-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~   68 (231)
T 2c5s_A            5 GGKVMVLLSGGIDSPVAAYL-TMK---RGVSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLH   68 (231)
T ss_dssp             TEEEEEECCSSSHHHHHHHH-HHH---BTEEEEEEEEECTTTSCHHHHHHHHHHHHHHGGGSSCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHH-HHH---CCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             88289993578639999999-997---49977999997899898789999999999839971556557


No 70 
>>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.00A {Pyrococcus horikoshii OT3} (A:1-140,A:301-334)
Probab=68.98  E-value=8.4  Score=18.84  Aligned_cols=54  Identities=19%  Similarity=0.327  Sum_probs=36.9

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEE
Q ss_conf             8665999976985018999999973999847999997688887888998608950463
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPI   59 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i   59 (205)
                      ||-|++|.  |.|+--+.++++..+.. +.+++.|..-.|+ .....+...+.+.+.-
T Consensus         1 M~IkVgI~--G~GrIGr~~~ra~~~~~-d~eiVaV~d~~p~-~~~~~a~~~~~~~~~~   54 (174)
T 2czc_A            1 MKVKVGVN--GYGTIGKRVAYAVTKQD-DMELIGITKTKPD-FEAYRAKELGIPVYAA   54 (174)
T ss_dssp             CCEEEEEE--CCSHHHHHHHHHHHTCT-TEEEEEEEESSCS-HHHHHHHHTTCCEEES
T ss_pred             CCEEEEEE--CCHHHHHHHHHHHHHCC-CCEEEEEECCCHH-HHHHHHCCCCEEEEEC
T ss_conf             97589998--98088999999995389-9689999689869-9999862075669945


No 71 
>>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} (A:1-159,A:379-433)
Probab=68.54  E-value=2.3  Score=22.70  Aligned_cols=150  Identities=15%  Similarity=0.064  Sum_probs=65.6

Q ss_pred             CCCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             866599997698-5018999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    2 IRKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         2 ~k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      +++||+|++.|+ |+.+..++..  ..........++. ..++ ....++..++++.....    +...++ +++..+. 
T Consensus        12 ~~~rIvIIGaG~iG~~~l~lL~r--~~~~~~~~i~~~d-~~~a-~~~~~~~~g~~~~~~~v----d~~n~~-~ll~~l~-   81 (214)
T 2ph5_A           12 FKNRFVILGFGCVGQALXPLIFE--KFDIKPSQVTIIA-AEGT-KVDVAQQYGVSFKLQQI----TPQNYL-EVIGSTL-   81 (214)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHH--HBCCCGGGEEEEE-SSCC-SCCHHHHHTCEEEECCC----CTTTHH-HHTGGGC-
T ss_pred             CCCCEEEECCCHHHHHHHHHHHH--CCCCCCCEEEEEC-CCHH-HHHHHHHCCCCEEEEEC----CHHHHH-HHHHHHH-
T ss_conf             07988998988869999999985--5378874599973-7767-79888743994488634----878899-9999974-


Q ss_pred             CCCEEEEEEEEEEECCCHHHHC---CCCCEEEC----------CCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCC
Q ss_conf             3430364311222057213210---66542313----------5322333244421210000246534453033123218
Q gi|254780570|r   81 IQPDLICLAGYMRLLSRDFVES---YKNKILNI----------HPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMD  147 (205)
Q Consensus        81 ~~~Dliv~~g~~~il~~~~l~~---~~~~~iN~----------HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D  147 (205)
                      -+.|++|.+.. ...+.+++..   .....+++          +++.-|..|......+.+....+..|+|+-     ..
T Consensus        82 ~~~DvVVn~s~-~~~~~~i~~ac~eaGv~YiDt~~e~~~~~~~~~~~~~~~rs~y~l~~~l~~~ak~~G~tAv-----~~  155 (214)
T 2ph5_A           82 EENDFLIDVSI-GISSLALIILCNQKGALYINAATEPWKEEFVXEKXALNRRTNYSLREEVLRLKDKTQKTAL-----IT  155 (214)
T ss_dssp             CTTCEEEECCS-SSCHHHHHHHHHHHTCEEEESSCCCCCC----------CCCHHHHHHHHHTTTTTCCSCEE-----CS
T ss_pred             CCCCEEEECCC-CCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE-----EC
T ss_conf             47998998985-1057999999998499667754355687545566874455469999999986530487477-----55


Q ss_pred             CCCEEEEEEEECCCCCCHHHH
Q ss_conf             662677899871899899999
Q gi|254780570|r  148 EGPIIAQAAVPVSSQDTESSL  168 (205)
Q Consensus       148 ~G~Ii~q~~~~i~~~d~~~~l  168 (205)
                      .|-=|. +.-++-|.-|+.+|
T Consensus       156 ~Gan~~-~~r~~~~~~~at~~  175 (214)
T 2ph5_A          156 HGANIQ-EARQIAPYNNATSL  175 (214)
T ss_dssp             CBTTHH-HHHHHCSSCCHHHH
T ss_pred             CCCCHH-HHHHHCCCCCCCHH
T ss_conf             889979-99966688886550


No 72 
>>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} (A:153-280)
Probab=67.93  E-value=8.3  Score=18.89  Aligned_cols=99  Identities=19%  Similarity=0.204  Sum_probs=52.5

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEEC--CCCCHH----HHHHHHCCCCEEEEECCCCCCCCCHHHHHH
Q ss_conf             665999976985-0189999999739998479999976--888878----889986089504630132332210124321
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSD--NSNAQG----LVKARKEKVPTFPIPYKDYISRREHEKAIL   75 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn--~~da~~----l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~   75 (205)
                      .+|+++.  |.. .-+.+++.+...  ++.++..+.-.  .++...    -+.+++.|......+.            +-
T Consensus         3 g~kia~v--Gd~~rv~~Sl~~~ls~--~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~~------------~~   66 (128)
T 1pvv_A            3 GVKVVYV--GDGNNVAHSLMIAGTK--LGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHD------------PV   66 (128)
T ss_dssp             TCEEEEE--SCCCHHHHHHHHHHHH--TTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESC------------HH
T ss_pred             CCEEEEE--CCCCCCHHHHHHHHHH--HCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECC------------HH
T ss_conf             7579997--7887526779999997--157689988986578789999999977751984999769------------99


Q ss_pred             HHCCCCCCEEEEEEEE-----------------EEECCCHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf             0001234303643112-----------------220572132106654231353223332444
Q gi|254780570|r   76 MQLSSIQPDLICLAGY-----------------MRLLSRDFVESYKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        76 ~~l~~~~~Dliv~~g~-----------------~~il~~~~l~~~~~~~iN~HpslLP~yrG~  121 (205)
                      +.++  +.|+|..-.|                 ...+..++++..+..++=+||  ||.+||.
T Consensus        67 eai~--~aDviyt~~w~~~~~~~~~~~~~~~~~~y~i~~~~l~~~~~d~~vmH~--LP~~r~~  125 (128)
T 1pvv_A           67 KAVK--DADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHC--LPAHRGE  125 (128)
T ss_dssp             HHTT--TCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEEC--SCCCBTT
T ss_pred             HHHC--CCCEEEEHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCEEECC--CCCCCCC
T ss_conf             9854--799994328886356111599998776267359999527999899899--9987886


No 73 
>>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus} (A:1-115,A:228-286)
Probab=67.76  E-value=8.9  Score=18.68  Aligned_cols=70  Identities=21%  Similarity=0.267  Sum_probs=38.8

Q ss_pred             CCCCEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             98665999976985--0189999999739998479999976888878889986089504630132332210124321000
Q gi|254780570|r    1 MIRKNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL   78 (205)
Q Consensus         1 M~k~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l   78 (205)
                      ++++.|.+|-||=|  |.++.+.+..     +.+-..-+.|++.           +|+-.-+.   ..-.++-.++.+.|
T Consensus        20 ~~~~~IgifdsG~Ggltv~~~i~~~l-----p~~~~iy~~D~~~-----------~Pyg~~s~---~~i~~~~~~~~~~L   80 (174)
T 2jfq_A           20 HMNKPIGVIDSGVGGLTVAKEIMRQL-----PNETIYYLGDIGR-----------CPYGPRPG---EQVKQYTVEIARKL   80 (174)
T ss_dssp             -CCSCEEEEESSSTTHHHHHHHHHHC-----TTCCEEEEECTTT-----------CCCTTSCH---HHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHC-----CCCCEEEEECCCC-----------CCCCCCCH---HHHHHHHHHHHHHH
T ss_conf             57998899968977799999999978-----9999899944888-----------98888999---99999999999999


Q ss_pred             CCCCCEEEEEE
Q ss_conf             12343036431
Q gi|254780570|r   79 SSIQPDLICLA   89 (205)
Q Consensus        79 ~~~~~Dliv~~   89 (205)
                      .+.+++++|.+
T Consensus        81 ~~~g~~~ivia   91 (174)
T 2jfq_A           81 MEFDIKMLVIA   91 (174)
T ss_dssp             TTSCCSEEEEC
T ss_pred             HHCCCCEEEEE
T ss_conf             85488779981


No 74 
>>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} (A:)
Probab=66.51  E-value=7.4  Score=19.23  Aligned_cols=57  Identities=11%  Similarity=0.124  Sum_probs=36.1

Q ss_pred             CCCCEEEEEECCCC-H--HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEE
Q ss_conf             98665999976985-0--189999999739998479999976888878889986089504
Q gi|254780570|r    1 MIRKNIVIFISGEG-T--NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTF   57 (205)
Q Consensus         1 M~k~riavl~SG~G-s--nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~   57 (205)
                      |.++||.+.+.||- .  =+++|++....+...+...+.-....+....+..+++|++.-
T Consensus         1 M~~~~vlFVc~~N~~RS~mAEai~~~~~~~~~~~~Sag~~~~~~~~~~~~~l~~~gi~~~   60 (131)
T 1jf8_A            1 MDKKTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDIS   60 (131)
T ss_dssp             -CCEEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSCCCCCHHHHHHHHHTTCCCT
T ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCC
T ss_conf             998879999498835999999999973889689854664456888067887651487555


No 75 
>>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A* (A:1-152,A:366-444)
Probab=66.36  E-value=9.5  Score=18.49  Aligned_cols=80  Identities=11%  Similarity=0.086  Sum_probs=42.3

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC--CHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             986659999769850189999999739998479999976888--878889986089504630132332210124321000
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSN--AQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL   78 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~d--a~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l   78 (205)
                      |-+.|+++.  |-|.--...+.++.... .++|+.|+.-++.  ....+++++.+.|.-....+   .    +....+.+
T Consensus        18 ~~~iRVgiI--G~G~rG~~~i~~~~~~~-g~eIvAicD~~~~~~~~a~~~~~~~g~~~~~~y~~---~----~~d~~ell   87 (231)
T 2ixa_A           18 PKKVRIAFI--AVGLRGQTHVENMARRD-DVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGN---G----NDDYKNML   87 (231)
T ss_dssp             -CCEEEEEE--CCSHHHHHHHHHHHTCT-TEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECS---S----TTTHHHHT
T ss_pred             CCCCEEEEE--CCCHHHHHHHHHHHCCC-CCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCC---C----CCCHHHHH
T ss_conf             987789998--68399999999997089-95899998588889999999999838863100155---4----46699995


Q ss_pred             CCCCCEEEEEEE
Q ss_conf             123430364311
Q gi|254780570|r   79 SSIQPDLICLAG   90 (205)
Q Consensus        79 ~~~~~Dliv~~g   90 (205)
                      +.-++|+|+.+.
T Consensus        88 ~~~~iD~V~IaT   99 (231)
T 2ixa_A           88 KDKNIDAVFVSS   99 (231)
T ss_dssp             TCTTCCEEEECC
T ss_pred             CCCCCCEEEEEC
T ss_conf             388989899915


No 76 
>>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP binding; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A (A:1-137,A:210-451)
Probab=66.30  E-value=7.7  Score=19.11  Aligned_cols=82  Identities=15%  Similarity=0.209  Sum_probs=36.9

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             86659999769850189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      .++|+.|+  |+|.-..+|..++.+..   .+..|.+.. +..+...+.+    ...++..+.       +++++..++.
T Consensus        20 ~~~kvLi~--g~g~~e~ai~~~~~~~~---~~~~~~~~~-~~~~~~~~~~----~~~~~~~d~-------~~i~~~a~~~   82 (379)
T 2yrx_A           20 SHMNVLVI--GRGGREHAIAWKAAQSP---LVGKLYVAP-GNPGIADVAE----LVHIDELDI-------EALVQFAKQQ   82 (379)
T ss_dssp             SSEEEEEE--ECSHHHHHHHHHHHTCT---TEEEEEEEE-CCTTGGGTSE----ECCCCTTCH-------HHHHHHHHHT
T ss_pred             HCCEEEEE--CCCHHHHHHHHHHHHCC---CCCEEEEEC-CCHHHHHCCE----EEECCCCCH-------HHHHHHHHHH
T ss_conf             09789999--97889999999997299---988899989-9878874082----775388999-------9999999995


Q ss_pred             CCEEEEEEEEEEECCCHHHH
Q ss_conf             43036431122205721321
Q gi|254780570|r   82 QPDLICLAGYMRLLSRDFVE  101 (205)
Q Consensus        82 ~~Dliv~~g~~~il~~~~l~  101 (205)
                      ++|.++. ||...+-..+.+
T Consensus        83 ~id~v~~-g~~~~~~~~~~~  101 (379)
T 2yrx_A           83 AIDLTIV-GPEAPLASGIVD  101 (379)
T ss_dssp             TCSEEEE-CSHHHHHTTHHH
T ss_pred             CCCEEEE-CCCHHHHHHHHH
T ss_conf             9999998-984688878999


No 77 
>>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis; 2.10A {Gloeobacter violaceus pcc 7421} (A:155-282)
Probab=66.20  E-value=9.5  Score=18.47  Aligned_cols=99  Identities=11%  Similarity=0.112  Sum_probs=51.8

Q ss_pred             CCEEEEEECCCCH-HHHHHHHHHHCCCCCCEEEEEEEC--CCCCHHHH----HHHHCCCCEEEEECCCCCCCCCHHHHHH
Q ss_conf             6659999769850-189999999739998479999976--88887888----9986089504630132332210124321
Q gi|254780570|r    3 RKNIVIFISGEGT-NMLSLIQATKKNDYPAEIVGVFSD--NSNAQGLV----KARKEKVPTFPIPYKDYISRREHEKAIL   75 (205)
Q Consensus         3 k~riavl~SG~Gs-nl~~Il~~~~~~~~~~eI~~Visn--~~da~~l~----~a~~~~Ip~~~i~~~~~~~~~~~~~~l~   75 (205)
                      .+|+++.  |.++ -+.+++.....  ++.++.++--.  .++....+    .+++.|..+...+.            +.
T Consensus         3 g~ki~~v--Gd~~~v~~S~~~~~~~--~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d------------~~   66 (128)
T 3gd5_A            3 GLKLAYV--GDGNNVAHSLLLGCAK--VGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRD------------PF   66 (128)
T ss_dssp             TCEEEEE--SCCCHHHHHHHHHHHH--HTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESC------------HH
T ss_pred             CCEEEEE--CCCHHHHHHHHHHHHH--CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCC------------HH
T ss_conf             9769996--4630266799999985--598638840234688788999987655315871133578------------99


Q ss_pred             HHCCCCCCEEEEEEEE-----------------EEECCCHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf             0001234303643112-----------------220572132106654231353223332444
Q gi|254780570|r   76 MQLSSIQPDLICLAGY-----------------MRLLSRDFVESYKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        76 ~~l~~~~~Dliv~~g~-----------------~~il~~~~l~~~~~~~iN~HpslLP~yrG~  121 (205)
                      +.++  +.|+|..-.|                 ...+.+++++..+..++=+||  ||.+||.
T Consensus        67 eav~--~aDvvyt~~w~~~~~~~~~~~~~~~~~~y~v~~~ll~~a~~~~~~mH~--LP~~R~~  125 (128)
T 3gd5_A           67 EAAR--GAHILYTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHC--LPAHRGE  125 (128)
T ss_dssp             HHHT--TCSEEEECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEEC--SCCCBTT
T ss_pred             HHHH--CCCEEEHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEECC--CCCCCCC
T ss_conf             9971--676000135666300021257888765520339999605999799898--9998884


No 78 
>>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} (A:1-146,A:339-358)
Probab=66.02  E-value=7.4  Score=19.23  Aligned_cols=128  Identities=13%  Similarity=0.010  Sum_probs=53.2

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCC--CCEEEEEEECCCCCHH-----------HHHHHHCCCCEEEEECCCCCCC
Q ss_conf             98665999976985018999999973999--8479999976888878-----------8899860895046301323322
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDY--PAEIVGVFSDNSNAQG-----------LVKARKEKVPTFPIPYKDYISR   67 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~--~~eI~~Visn~~da~~-----------l~~a~~~~Ip~~~i~~~~~~~~   67 (205)
                      |-+.|++++  |.|+--...++.......  ..+++++.. ......           -...+.....         ...
T Consensus         2 mk~irvgii--G~G~iG~~~l~~l~~~~~~~~~~~vai~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~   69 (166)
T 1ebf_A            2 TKVVNVAVI--GAGVVGSAFLDQLLAMKSTITYNLVLLAE-AERSLISKDFSPLNVGSDWKAALAAST---------TKT   69 (166)
T ss_dssp             CSEEEEEEE--CCSHHHHHHHHHHHHCCCSSEEEEEEEEC-SSBEEECSSCSCCSCTTCHHHHHHTCC---------CBC
T ss_pred             CCEEEEEEE--CCCHHHHHHHHHHHHHHHHCCCCEEEEEE-EEEEEECCCCCCCCCCHHHHHHHHCCC---------CCC
T ss_conf             867989998--66889999999999735550633899999-889999787886320035777641145---------667


Q ss_pred             CCHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCC--CCCHHCCCCCCCCCCEEEEC
Q ss_conf             10124321000123430364311222057213210665423135322333244421--21000024653445303312
Q gi|254780570|r   68 REHEKAILMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHT--HRRVLQSGIKITGCTVHMVT  143 (205)
Q Consensus        68 ~~~~~~l~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~--~~~ai~~g~~~~G~TiH~v~  143 (205)
                      ......+.+.+.+.++|+++.+.=..--.+.+....+.   +.|--...+=+-...  ..+.+..-.++.|+++++..
T Consensus        70 ~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~---GkhV~~~~eKP~a~~~~~~~~L~~~a~~~g~~~~~~~  144 (166)
T 1ebf_A           70 LPLDDLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVEN---GISIATPNKKAFSSDLATWKALFSNKPTNGFVYHEAT  144 (166)
T ss_dssp             CCHHHHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHT---TCEEECCCCGGGSSCHHHHHHHTCCCTTCCCEECGGG
T ss_pred             CCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEECHHHCCCCHHHHHHHHHHHCCCEEEEEEEE
T ss_conf             64466799984399971999889986799999999977---9868850305404478899999975356569999644


No 79 
>>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics, protein structure initiative; 2.75A {Pyrococcus horikoshii} (A:1-110,A:246-318)
Probab=65.76  E-value=9.7  Score=18.42  Aligned_cols=36  Identities=19%  Similarity=0.220  Sum_probs=20.2

Q ss_pred             CCCCEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             98665999976985--018999999973999847999997688
Q gi|254780570|r    1 MIRKNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         1 M~k~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      ||++||+|..+|.+  +.+..|.+    .....+|+ ||+.++
T Consensus         1 m~~~kIvIIGgG~aGl~~A~~Lr~----~~~~~~It-vie~~~   38 (183)
T 3kd9_A            1 MSLKKVVIIGGGAAGMSAASRVKR----LKPEWDVK-VFEATE   38 (183)
T ss_dssp             -CCCEEEEECCSHHHHHHHHHHHH----HCTTSEEE-EECSSS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHC----CCCCCCEE-EEECCC
T ss_conf             998809998988999999999980----69898389-993887


No 80 
>>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, JCSG, protein structure initiative, PSI; 2.25A {Thermotoga maritima} (A:165-294)
Probab=65.53  E-value=9.8  Score=18.39  Aligned_cols=101  Identities=15%  Similarity=0.142  Sum_probs=52.6

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEC--CCCCHHHH----HHHHCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf             6659999769850189999999739998479999976--88887888----99860895046301323322101243210
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSD--NSNAQGLV----KARKEKVPTFPIPYKDYISRREHEKAILM   76 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn--~~da~~l~----~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~   76 (205)
                      ++|+++..-+.+.-+.+++.....  ++.++.++--.  .++...++    .|++.|..+...+.            +-+
T Consensus         3 glkia~vGD~~~rv~~S~~~~~~~--~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d------------~~e   68 (130)
T 1vlv_A            3 GVKVVFMGDTRNNVATSLMIACAK--MGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSN------------LEE   68 (130)
T ss_dssp             TCEEEEESCTTSHHHHHHHHHHHH--TTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESC------------HHH
T ss_pred             CCCEEEECCCCCEEEEHHHHHHHH--CCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCC------------HHH
T ss_conf             455146415555064137889987--698499996113235423454454420012355334359------------999


Q ss_pred             HCCCCCCEEEEEEEE--E---------------EECCCHHHHC-CCCCEEECCCCCCCCCCCC
Q ss_conf             001234303643112--2---------------2057213210-6654231353223332444
Q gi|254780570|r   77 QLSSIQPDLICLAGY--M---------------RLLSRDFVES-YKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        77 ~l~~~~~Dliv~~g~--~---------------~il~~~~l~~-~~~~~iN~HpslLP~yrG~  121 (205)
                      .++  +.|+|..-.|  |               ..+..++++. .+..++=+||  ||.+||.
T Consensus        69 av~--~aDviytd~w~~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~ivmHc--LP~~r~~  127 (130)
T 1vlv_A           69 ALA--GADVVYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHC--LPAVKGQ  127 (130)
T ss_dssp             HHT--TCSEEEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEEC--SCCCBTT
T ss_pred             HHH--CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHCCCCCCEEECC--CCCCCCC
T ss_conf             983--4664554466541134666988876247335699997318999899797--8589987


No 81 
>>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidoreductase; HET: FAD; 2.54A {Bacillus SP} (1:)
Probab=65.08  E-value=9.4  Score=18.51  Aligned_cols=36  Identities=25%  Similarity=0.219  Sum_probs=25.5

Q ss_pred             CCCEEEEEECCCCHHHH--HHHHHHHCCCCCCEEEEEEEC
Q ss_conf             86659999769850189--999999739998479999976
Q gi|254780570|r    2 IRKNIVIFISGEGTNML--SLIQATKKNDYPAEIVGVFSD   39 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~--~Il~~~~~~~~~~eI~~Visn   39 (205)
                      -+|||.+.++|.++..+  .+++..+.  ...+|..|+|.
T Consensus         7 ~~k~ili~itGs~~~~~~~~~l~~L~~--~g~~v~vv~T~   44 (194)
T 1p3y_1            7 KDKKLLIGICGSISSVGISSYLLYFKS--FFKEIRVVMTK   44 (194)
T ss_dssp             GGCEEEEEECSCGGGGGTHHHHHHHTT--TSSEEEEEECH
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHHHHH--CCCEEEEEEEC
T ss_conf             889699999588999999999999997--89959999812


No 82 
>>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} (A:1-172)
Probab=64.62  E-value=2.9  Score=22.07  Aligned_cols=31  Identities=16%  Similarity=0.090  Sum_probs=19.0

Q ss_pred             CCCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             866599997698-5018999999973999847999997
Q gi|254780570|r    2 IRKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFS   38 (205)
Q Consensus         2 ~k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Vis   38 (205)
                      |++||+|+.+|+ |+.+-..+.   .   ..+++.+..
T Consensus         1 M~mkI~IIGaG~iG~~la~~L~---~---~g~v~~~~~   32 (172)
T 3ego_A            1 MSLKIGIIGGGSVGLLCAYYLS---L---YHDVTVVTR   32 (172)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHH---T---TSEEEEECS
T ss_pred             CCCEEEEECCCHHHHHHHHHHH---C---CCCEEEEEC
T ss_conf             9988999896799999999997---6---498699988


No 83 
>>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} (A:)
Probab=64.56  E-value=1.1  Score=24.85  Aligned_cols=36  Identities=19%  Similarity=0.167  Sum_probs=21.2

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             866599997698501899999997399984799999768
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDN   40 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~   40 (205)
                      .+.|++|.  |.|.-....+.++.... .++++.|+..+
T Consensus        15 ~~irv~iI--G~G~~g~~~~~~l~~~~-~~~lvav~d~~   50 (365)
T 2z2v_A           15 RHMKVLIL--GAGNIGRAIAWDLKDEF-DVYIGDVNNEN   50 (365)
T ss_dssp             -CCEEEEE--CCSHHHHHHHHHHTTTS-EEEEEESCHHH
T ss_pred             CCCEEEEE--CCCHHHHHHHHHHHCCC-CEEEEECCHHH
T ss_conf             71479999--95699999999984689-84999887889


No 84 
>>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} (A:114-250)
Probab=63.76  E-value=11  Score=18.17  Aligned_cols=41  Identities=17%  Similarity=0.205  Sum_probs=32.3

Q ss_pred             CCCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf             8665999976985-0189999999739998479999976888
Q gi|254780570|r    2 IRKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNSN   42 (205)
Q Consensus         2 ~k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~d   42 (205)
                      ..++++++++|.| +-+.++++...+.+...++.++.+.+..
T Consensus         3 ~~~~iv~iAgG~GIaP~~s~l~~~~~~~~~~~v~l~~~~r~~   44 (137)
T 1tvc_A            3 GMAPRYFVAGGTGLAPVVSMVRQMQEWTAPNETRIYFGVNTE   44 (137)
T ss_dssp             SSSCEEEEEESSTTHHHHHHHHHHHHHTCCSCEEEEEECSSS
T ss_pred             CCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEECCCH
T ss_conf             565469996487864422210000124777420247401221


No 85 
>>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A* (A:1-40,A:148-221,A:327-383)
Probab=62.51  E-value=9.1  Score=18.62  Aligned_cols=51  Identities=10%  Similarity=0.052  Sum_probs=30.1

Q ss_pred             CCCCEEEEEECCC-C-HHHHHHHHHHHCCCCCCEEEEEEECCCCCH--------HHHHHHHCCCCEEE
Q ss_conf             9866599997698-5-018999999973999847999997688887--------88899860895046
Q gi|254780570|r    1 MIRKNIVIFISGE-G-TNMLSLIQATKKNDYPAEIVGVFSDNSNAQ--------GLVKARKEKVPTFP   58 (205)
Q Consensus         1 M~k~riavl~SG~-G-snl~~Il~~~~~~~~~~eI~~Visn~~da~--------~l~~a~~~~Ip~~~   58 (205)
                      |.+++++|..+|- | |++..|-++      .+++ +|+..++-..        ..+.+++.|+.++.
T Consensus         1 m~~~~v~iiG~G~~g~~~a~~la~~------g~~v-~v~e~~~~~~~d~~l~~~~~~~a~~~Gv~i~~   61 (171)
T 2qcu_A            1 METKDLIVIGGGINGAGIAADAAGR------GLSV-LMLEAQDLACADARLVLANAQMVVRKGGEVLT   61 (171)
T ss_dssp             --CBSEEEECCSHHHHHHHHHHHHT------TCCE-EEECSSSTTCSHHHHHHHHHHHHHHTTCEEEC
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHC------CCCE-EEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             9827989999679999999999978------9979-99969977460078799999866651434300


No 86 
>>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori SS1} (A:1-139)
Probab=62.48  E-value=11  Score=18.01  Aligned_cols=36  Identities=14%  Similarity=0.163  Sum_probs=23.4

Q ss_pred             CCCCEEEEEECCCCH-------HHHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             986659999769850-------1899999997399984799999768
Q gi|254780570|r    1 MIRKNIVIFISGEGT-------NMLSLIQATKKNDYPAEIVGVFSDN   40 (205)
Q Consensus         1 M~k~riavl~SG~Gs-------nl~~Il~~~~~~~~~~eI~~Visn~   40 (205)
                      |+|+||+||+-|..+       .+.+++++....    ++..+.-++
T Consensus        18 ~~k~~I~vlfGG~S~EheVSl~Sa~~V~~aLd~~----~~~~~~I~~   60 (139)
T 2pvp_A           18 GSHMEFCVLFGGASFEHEISIVSAIALKGVLKDR----IKYFIFLDE   60 (139)
T ss_dssp             --CCCEEEEEECSSTTHHHHHHHHHHHHHHHGGG----EEEEEEECT
T ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCC----CCEEEEEEC
T ss_conf             9998899990858414699999999999986116----977999908


No 87 
>>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} (A:237-397,A:442-503)
Probab=62.26  E-value=11  Score=17.99  Aligned_cols=56  Identities=9%  Similarity=-0.076  Sum_probs=36.0

Q ss_pred             CCEEEEEECCC-CHHH-HHHHHHHHCCCCCCEEEEEEECCCCC----HHHHHHHHCCCCEEEEECCC
Q ss_conf             66599997698-5018-99999997399984799999768888----78889986089504630132
Q gi|254780570|r    3 RKNIVIFISGE-GTNM-LSLIQATKKNDYPAEIVGVFSDNSNA----QGLVKARKEKVPTFPIPYKD   63 (205)
Q Consensus         3 k~riavl~SG~-Gsnl-~~Il~~~~~~~~~~eI~~Visn~~da----~~l~~a~~~~Ip~~~i~~~~   63 (205)
                      .++++++.||+ .|.+ .+++.     +...++.++..+....    ..-+.|+..|++.+.+....
T Consensus         2 ~~kV~v~lSGGlDSSviaall~-----~~g~~V~a~t~~~~~~~E~e~a~~va~~Lg~~~~~i~i~~   63 (223)
T 1q15_A            2 FDTVGIPLSGGLDSSLVTALAS-----RHFKKLNTYSIGTELSNEFEFSQQVADALGTHHQMKILSE   63 (223)
T ss_dssp             CSEEEEECCSSHHHHHHHHHHT-----TTCSEEEEEEEEETTBCCHHHHHHHHHHHTCEEEEEEECH
T ss_pred             CCCEEEEECCCCCHHHHHHHHH-----HCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCCH
T ss_conf             8856887058752488999876-----2034300012577777547899999998401333213888


No 88 
>>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus HB8} (A:43-204)
Probab=62.06  E-value=11  Score=18.02  Aligned_cols=15  Identities=20%  Similarity=0.104  Sum_probs=9.3

Q ss_pred             CCEEECCCCCCCCCC
Q ss_conf             542313532233324
Q gi|254780570|r  105 NKILNIHPSLLPLFP  119 (205)
Q Consensus       105 ~~~iN~HpslLP~yr  119 (205)
                      +.++.+.|+.-|+|-
T Consensus       133 ~~~~~~~~~vgGR~S  147 (162)
T 1zzg_A          133 LKAFAIPKEVGGRFS  147 (162)
T ss_dssp             CEEEECCTTCCGGGC
T ss_pred             HHHEECCCCCCCCEE
T ss_conf             442113453553201


No 89 
>>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} (A:218-446)
Probab=61.29  E-value=12  Score=17.87  Aligned_cols=57  Identities=16%  Similarity=0.235  Sum_probs=34.7

Q ss_pred             CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECC-----CCC-HHHHHHHHCCCCEEEEECC
Q ss_conf             66599997698-50-1899999997399984799999768-----888-7888998608950463013
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDN-----SNA-QGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~-----~da-~~l~~a~~~~Ip~~~i~~~   62 (205)
                      .+|++|++||+ .| .+..++... .+  +.++.+|..+.     ++. .+-+.|+..|++.++++..
T Consensus        23 ~~~v~v~~SGG~DSs~ll~l~~~~-~~--~~~i~~v~~~~g~~~~~~~~~a~~~a~~lgi~~~vi~i~   87 (229)
T 2vxo_A           23 TSKVLVLLSGGVDSTVCTALLNRA-LN--QEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAA   87 (229)
T ss_dssp             TCEEEEECCSSHHHHHHHHHHHHH-SC--GGGEEEEEEECSCCCSSTTHHHHHHHHHTTCCEEEEECH
T ss_pred             CCCCEEEECCCCCHHHHHHHHHHH-HC--CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCH
T ss_conf             455136630575138899999985-04--364379995633478655999999999849976998727


No 90 
>>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} (A:1-86,A:293-306)
Probab=61.03  E-value=12  Score=17.84  Aligned_cols=33  Identities=9%  Similarity=0.311  Sum_probs=20.5

Q ss_pred             CCCEEEEEECCCCH-------HHHHHHHHHHCCCCCCEEEEE
Q ss_conf             86659999769850-------189999999739998479999
Q gi|254780570|r    2 IRKNIVIFISGEGT-------NMLSLIQATKKNDYPAEIVGV   36 (205)
Q Consensus         2 ~k~riavl~SG~Gs-------nl~~Il~~~~~~~~~~eI~~V   36 (205)
                      ||+||++++.|..+       ..+++.++.....  +++..+
T Consensus         1 MkmkI~il~GG~SsE~evSl~Sa~~i~~aL~~~g--~~v~~i   40 (100)
T 1iow_A            1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGG--IDAYPV   40 (100)
T ss_dssp             CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT--CEEEEE
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC--CEEEEE
T ss_conf             9850999938687422849999999999998869--979998


No 91 
>>1e9y_B Urease beta subunit; hydrolase, dodecamer, acetohydroxamic acid; HET: KCX; 3.0A {Helicobacter pylori} (B:132-425,B:485-569)
Probab=60.93  E-value=12  Score=17.83  Aligned_cols=89  Identities=19%  Similarity=0.204  Sum_probs=57.7

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC--------HHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf             66599997698501899999997399984799999768888--------7888998608950463013233221012432
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNA--------QGLVKARKEKVPTFPIPYKDYISRREHEKAI   74 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da--------~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l   74 (205)
                      ..++.+|.-|++|.-++|.+.+..|-...+|      ++|-        ..|.-|.++.+++-..  .|..+...|-+..
T Consensus        59 P~N~g~~gkGn~s~~~~l~eqi~aGa~glKi------HEDwGatpa~Id~~L~vad~~dvqvaiH--tDtlNE~Gfve~T  130 (379)
T 1e9y_B           59 SMNLGFLAKGNASNDASLADQIEAGAIGFXI------HEDWGTTPSAINHALDVADKYDVQVAIH--TDTLNEAGCVEDT  130 (379)
T ss_dssp             SSEEEEEEECCCSCHHHHHHHHHTTCSEEEE------CGGGCCCHHHHHHHHHHHHHTTCEEEEC--CCTTCSSCCHHHH
T ss_pred             CEEEEEECCCCCCCHHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHHHHHHHHCCEEEEE--CCCCHHHHHHHHH
T ss_conf             5016875266655288899999716660001------2332222799999999998640236773--0572056899999


Q ss_pred             HHHCC--------------CCCCEEEEEEEEEEECCCHH
Q ss_conf             10001--------------23430364311222057213
Q gi|254780570|r   75 LMQLS--------------SIQPDLICLAGYMRLLSRDF   99 (205)
Q Consensus        75 ~~~l~--------------~~~~Dliv~~g~~~il~~~~   99 (205)
                      +..++              .+.||++.++|+..+||.+-
T Consensus       131 ~~a~~gRtiH~~HtEGAGGGHAPDii~~~~~~nvlpsST  169 (379)
T 1e9y_B          131 MAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPAST  169 (379)
T ss_dssp             HHHHTTCCEEETTTTSTTSCSTTTGGGGGGSTTEEEEEC
T ss_pred             HHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCEEEEE
T ss_conf             986468865134442310032799999861148255520


No 92 
>>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex; HET: PSQ; 1.70A {Escherichia coli} (G:153-278)
Probab=60.71  E-value=12  Score=17.80  Aligned_cols=99  Identities=11%  Similarity=0.052  Sum_probs=47.6

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEC--CCCCHHHHHH----HHCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf             6659999769850189999999739998479999976--8888788899----860895046301323322101243210
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSD--NSNAQGLVKA----RKEKVPTFPIPYKDYISRREHEKAILM   76 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn--~~da~~l~~a----~~~~Ip~~~i~~~~~~~~~~~~~~l~~   76 (205)
                      .+|+++..-+.+.-+.+++..+..  ++.++.++--.  .++...++.+    ++.|..+...+.            +.+
T Consensus         3 glki~~vGd~~~rv~~S~~~~~~~--~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d------------~~e   68 (126)
T 1duv_G            3 EMTLVYAGDARNNMGNSMLEAAAL--TGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTED------------VAK   68 (126)
T ss_dssp             GCEEEEESCTTSHHHHHHHHHHHH--HCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESC------------HHH
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHC--CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEC------------HHH
T ss_conf             427998357543206778877632--682243113423488489999998764047986899724------------322


Q ss_pred             HCCCCCCEEEEEEEE------------------EEECCCHHHHC-CCCCEEECCCCCCCCCC
Q ss_conf             001234303643112------------------22057213210-66542313532233324
Q gi|254780570|r   77 QLSSIQPDLICLAGY------------------MRLLSRDFVES-YKNKILNIHPSLLPLFP  119 (205)
Q Consensus        77 ~l~~~~~Dliv~~g~------------------~~il~~~~l~~-~~~~~iN~HpslLP~yr  119 (205)
                      .++  +.|+|..-.|                  ...+.+++++. .+..++=+||  ||.+|
T Consensus        69 a~~--~aDviy~~~w~~~~~~~~~~~~~~~~~~~y~v~~e~l~~~a~~dai~mH~--LP~~R  126 (126)
T 1duv_G           69 GVE--GADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHC--LPAFH  126 (126)
T ss_dssp             HHT--TCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEEC--SCCCC
T ss_pred             HCC--CCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHCCCCEEEECC--CCCCC
T ss_conf             115--79787310466766555455544333116178799997504999699699--98751


No 93 
>>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} (A:1-191,A:370-394)
Probab=59.95  E-value=3.1  Score=21.79  Aligned_cols=132  Identities=11%  Similarity=-0.001  Sum_probs=59.2

Q ss_pred             CCCEEEEEE--CCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH--HHHHHCCCCEEEEECCCC-CCCCCHHHHH
Q ss_conf             866599997--6985--01899999997399984799999768888788--899860895046301323-3221012432
Q gi|254780570|r    2 IRKNIVIFI--SGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGL--VKARKEKVPTFPIPYKDY-ISRREHEKAI   74 (205)
Q Consensus         2 ~k~riavl~--SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l--~~a~~~~Ip~~~i~~~~~-~~~~~~~~~l   74 (205)
                      ||+||++..  +.+|  +-...+.+.....  +++|..+..+.+.....  ....-..++....+.... ...-.+...+
T Consensus        14 MKmkI~~v~~p~~GG~~~~~~~la~~L~~~--G~eV~vit~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l   91 (216)
T 2jjm_A           14 MKLKIGITCYPSVGGSGVVGTELGKQLAER--GHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDLALASKM   91 (216)
T ss_dssp             -CCEEEEECCC--CHHHHHHHHHHHHHHHT--TCEEEEECSSCC----CCCTTEEEECCCCC----CCSCCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
T ss_conf             657799989999996999999999999977--998999947998642113797069970456666101560358999999


Q ss_pred             HHHCCCCCCEEEEEEEEE-EECCCHHHHCCC---C-CEEECCCCCCCCCCC---CCCC-CCHHCCCCCCC
Q ss_conf             100012343036431122-205721321066---5-423135322333244---4212-10000246534
Q gi|254780570|r   75 LMQLSSIQPDLICLAGYM-RLLSRDFVESYK---N-KILNIHPSLLPLFPG---LHTH-RRVLQSGIKIT  135 (205)
Q Consensus        75 ~~~l~~~~~Dliv~~g~~-~il~~~~l~~~~---~-~~iN~HpslLP~yrG---~~~~-~~ai~~g~~~~  135 (205)
                      .+.+++.++|+|.+..+. .-+...++..+.   . -++..|.+-...++.   .... .+++..-+...
T Consensus        92 ~~~i~~~~~DiIh~h~~~~~~~~~~l~~~~~~~~ip~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii  161 (216)
T 2jjm_A           92 AEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVT  161 (216)
T ss_dssp             HHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTTCTTTHHHHHHHHHHSSEEE
T ss_pred             HHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEE
T ss_conf             9998870984898324331168999998750567733553112221000147788899999997441767


No 94 
>>1m1n_A Nitrogenase molybdenum-iron protein alpha chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} (A:1-55,A:299-491)
Probab=59.63  E-value=12  Score=17.68  Aligned_cols=104  Identities=16%  Similarity=0.154  Sum_probs=56.2

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHH-HHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             6599997698501899999997399984799999768888788899-860895046301323322101243210001234
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKA-RKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a-~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      +|++|+  +.|+-...+.+...  ++..+++++.+........++. +..+-...++...     .  ..++.+.++..+
T Consensus       105 krv~I~--~~~~~~~~~~~~l~--ELGm~vv~~~~~~~~~~~~~~~~~~l~~~~~i~dd~-----d--~~E~~~~i~~~~  173 (248)
T 1m1n_A          105 KRVMLY--IGGLRPRHVIGAYE--DLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLLYDDV-----T--GYEFEEFVKRIK  173 (248)
T ss_dssp             CEEEEC--BSSSHHHHTHHHHH--TTTCEEEEEEESSCCHHHHHTTTTTSCTTCEEEESC-----B--HHHHHHHHHHHC
T ss_pred             CEEEEE--CCCHHHHHHHHHHH--HCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEECCC-----C--HHHHHHHHHHCC
T ss_conf             836773--68511799999999--879979999705787789999998679987897389-----9--999999998539


Q ss_pred             CEEEEEEEEEEECCCHHHHCCCCCEEECCC----CCCCCCCCCC
Q ss_conf             303643112220572132106654231353----2233324442
Q gi|254780570|r   83 PDLICLAGYMRLLSRDFVESYKNKILNIHP----SLLPLFPGLH  122 (205)
Q Consensus        83 ~Dliv~~g~~~il~~~~l~~~~~~~iN~Hp----slLP~yrG~~  122 (205)
                      |||++...+    .+.+..+....++.+|.    +..=-|+|+.
T Consensus       174 PDLi~g~~~----ek~~a~k~giP~~~~~~~d~~~py~Gy~Ga~  213 (248)
T 1m1n_A          174 PDLIGSGIK----EKFIFQKMGIPFREMHSWDYSGPYHGFDGFA  213 (248)
T ss_dssp             CSEEEECHH----HHHHHHHTTCCEEESSSGGGCCCCSHHHHHH
T ss_pred             CCEEEECCC----HHHHHHHCCCCEEECCCCCCCCCCCCHHHHH
T ss_conf             999998984----0799998299970077654688853586699


No 95 
>>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structure initiative; 2.30A {Desulfovibrio vulgaris DP4} (A:1-131,A:255-332)
Probab=59.31  E-value=13  Score=17.64  Aligned_cols=36  Identities=17%  Similarity=0.138  Sum_probs=21.9

Q ss_pred             CCCCEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             98665999976985--018999999973999847999997688
Q gi|254780570|r    1 MIRKNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         1 M~k~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      |.++||+|+.+|.+  +.+..|.+.    ....+|. ||+.++
T Consensus         1 Ms~~kIvIIGaG~aG~~aA~~lr~~----~~~~~It-vi~~~~   38 (209)
T 3iwa_A            1 MSLKHVVVIGAVALGPKAACRFKRL----DPEAHVT-MIDQAS   38 (209)
T ss_dssp             ---CEEEEECCSSHHHHHHHHHHHH----CTTSEEE-EECCC-
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHC----CCCCCEE-EEECCC
T ss_conf             9879999989889999999999807----9898389-992899


No 96 
>>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii} (A:)
Probab=58.79  E-value=13  Score=17.59  Aligned_cols=56  Identities=7%  Similarity=-0.033  Sum_probs=37.0

Q ss_pred             CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECCC---CC-HHHHHHHHCCCCEEEEECCC
Q ss_conf             66599997698-50-18999999973999847999997688---88-78889986089504630132
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDNS---NA-QGLVKARKEKVPTFPIPYKD   63 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~~---da-~~l~~a~~~~Ip~~~i~~~~   63 (205)
                      +.|+++.+||+ .| .+..++..     ...++.+|..+..   +. ..-+.++..+++...++...
T Consensus         6 ~~kv~v~~SGG~DS~~ll~ll~~-----~~~~v~~v~~d~g~~~~~~~~~~~~~~l~~~~~~~~~~~   67 (203)
T 3k32_A            6 LXDVHVLFSGGKDSSLSAVILKK-----LGYNPHLITINFGVIPSYKLAEETAKILGFKHKVITLDR   67 (203)
T ss_dssp             CEEEEEECCCSHHHHHHHHHHHH-----TTEEEEEEEEECSSSCTTHHHHHHHHHHTCEEEEEECCT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHH-----CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCH
T ss_conf             46189995376899999999997-----299769999679986379999999998469629997889


No 97 
>>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii OT3} PDB: 2z0c_A 3a4i_A (A:1-189)
Probab=58.22  E-value=13  Score=17.52  Aligned_cols=56  Identities=11%  Similarity=0.111  Sum_probs=33.5

Q ss_pred             CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECCC---CCH----HHHHHHHCCCCEEEEECC
Q ss_conf             66599997698-50-18999999973999847999997688---887----888998608950463013
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDNS---NAQ----GLVKARKEKVPTFPIPYK   62 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~~---da~----~l~~a~~~~Ip~~~i~~~   62 (205)
                      +.++++++||+ .| .+..++...    .+.++.+|..+..   ...    ..+.++..+++..+++..
T Consensus        20 ~~~vvi~~SGG~DS~~~l~ll~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (189)
T 2dpl_A           20 DSKAIIALSGGVDSSTAAVLAHKA----IGDRLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHYVDAQ   84 (189)
T ss_dssp             TSCEEEECCSSHHHHHHHHHHHHH----HGGGEEEEEEECSCCCTTHHHHHHHHHTTTTCCEEEEEECH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHH----HCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEHH
T ss_conf             998999906889999999999997----58877999958987885389999996541257424897304


No 98 
>>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp} (A:)
Probab=58.16  E-value=13  Score=17.52  Aligned_cols=57  Identities=16%  Similarity=0.170  Sum_probs=34.7

Q ss_pred             CCCEEEEEECCC-CHHH-HHHHHHHHCCCCCCEEEEEEECCCCC------HHHHHHHHCCCCEEEEECCC
Q ss_conf             866599997698-5018-99999997399984799999768888------78889986089504630132
Q gi|254780570|r    2 IRKNIVIFISGE-GTNM-LSLIQATKKNDYPAEIVGVFSDNSNA------QGLVKARKEKVPTFPIPYKD   63 (205)
Q Consensus         2 ~k~riavl~SG~-Gsnl-~~Il~~~~~~~~~~eI~~Visn~~da------~~l~~a~~~~Ip~~~i~~~~   63 (205)
                      .++|++|.+||+ .|.+ ..++..  .   ..++..+..+....      .+-+.|+..|++.+.++...
T Consensus        28 ~~~kv~V~lSGG~DS~~ll~l~~~--~---~~~~~~~~~~~~~~~~~~~~~a~~~a~~lgi~~~~i~~~~   92 (249)
T 3fiu_A           28 PAEGFVIGLSGGIDSAVAASLAVK--T---GLPTTALILPSDNNQHQDMQDALELIEMLNIEHYTISIQP   92 (249)
T ss_dssp             TCSEEEEECCSSHHHHHHHHHHHH--T---TSCEEEEECCCTTSCHHHHHHHHHHHHHHTCEEEECCCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH--H---CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf             998399977799899999999998--2---9863210025664047789999999862454431145889


No 99 
>>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3itk_A* (A:1-213)
Probab=58.08  E-value=13  Score=17.51  Aligned_cols=51  Identities=22%  Similarity=0.223  Sum_probs=25.9

Q ss_pred             CCC-CEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEE
Q ss_conf             986-6599997698-50189999999739998479999976888878889986089504
Q gi|254780570|r    1 MIR-KNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTF   57 (205)
Q Consensus         1 M~k-~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~   57 (205)
                      |++ +||+|+.+|. |+.+-..+-.  .   .+++..+..|+. ...++...+...+..
T Consensus         2 m~~~~kI~IiGaG~mG~~iA~~la~--~---G~~v~v~~~d~~-~~~~~~~~~~~~~~~   54 (213)
T 2q3e_A            2 MFEIKKICCIGAGYVGGPTCSVIAH--M---CPEIRVTVVDVN-ESRINAWNSPTLPIY   54 (213)
T ss_dssp             CCCCCEEEEECCSTTHHHHHHHHHH--H---CTTSEEEEECSC-HHHHHHHTSSSCSSC
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHH--H---CCCCEEEEEECC-HHHHHHHHCCCCCCC
T ss_conf             6568679999988308999999997--4---999849999899-999999877999977


No 100
>>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} (A:)
Probab=57.67  E-value=13  Score=17.46  Aligned_cols=87  Identities=15%  Similarity=0.140  Sum_probs=38.2

Q ss_pred             CCCCEEEEEECCCCHHH-HHHHHHHHCCCCCCEEEEEEECCCCC-HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             98665999976985018-99999997399984799999768888-78889986089504630132332210124321000
Q gi|254780570|r    1 MIRKNIVIFISGEGTNM-LSLIQATKKNDYPAEIVGVFSDNSNA-QGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL   78 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl-~~Il~~~~~~~~~~eI~~Visn~~da-~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l   78 (205)
                      |.|   ++|++|.++.+ +++..++.+.  .++|+++--|.++. ...+..++.+.....+. .|..+.+..++-+.+..
T Consensus         1 m~K---~vlITGas~GIG~aia~~la~~--G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~-~D~~~~~~v~~~~~~~~   74 (256)
T 1geg_A            1 MKK---VALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVK-VDVSDRDQVFAAVEQAR   74 (256)
T ss_dssp             -CC---EEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE-CCTTSHHHHHHHHHHHH
T ss_pred             CCC---EEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEE-ECCCCHHHHHHHHHHHH
T ss_conf             998---9999478509999999999987--99899998989999999999985289713785-12100057789999999


Q ss_pred             CCC-CCEEEE-EEEEEE
Q ss_conf             123-430364-311222
Q gi|254780570|r   79 SSI-QPDLIC-LAGYMR   93 (205)
Q Consensus        79 ~~~-~~Dliv-~~g~~~   93 (205)
                      +.+ .+|.+| .+|...
T Consensus        75 ~~~g~iDilvnnAg~~~   91 (256)
T 1geg_A           75 KTLGGFDVIVNNAGVAP   91 (256)
T ss_dssp             HHTTCCCEEEECCCCCC
T ss_pred             HHCCCCEEEEECCCCCC
T ss_conf             96399709998987666


No 101
>>2pfs_A USP, universal stress protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.25A {Nitrosomonas europaea atcc 19718} (A:)
Probab=57.61  E-value=13  Score=17.45  Aligned_cols=89  Identities=9%  Similarity=0.037  Sum_probs=43.9

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHC-CCCCCEEEEEEECCCC--------------C-------------HHHHHHHHC
Q ss_conf             98665999976985018999999973-9998479999976888--------------8-------------788899860
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKK-NDYPAEIVGVFSDNSN--------------A-------------QGLVKARKE   52 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~-~~~~~eI~~Visn~~d--------------a-------------~~l~~a~~~   52 (205)
                      ||-+||.|-++++-++..++-.+..- ...+.++.++-.-.+.              .             .....+...
T Consensus         4 m~~k~ILV~vd~s~~s~~al~~a~~~a~~~~~~i~~lhv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (150)
T 2pfs_A            4 SVYHHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVLDNIPXPDTPYGTAIPLDTETTYDAXLDVEKQKLSQIGNTL   83 (150)
T ss_dssp             CSCSEEEEECCCCTTHHHHHHHHHHHHHHHTCEEEEEEEEC----------CCCCSSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             88987999983998999999999999987299068888852255544443333200069999999999999999888754


Q ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEE
Q ss_conf             89504630132332210124321000123430364311222
Q gi|254780570|r   53 KVPTFPIPYKDYISRREHEKAILMQLSSIQPDLICLAGYMR   93 (205)
Q Consensus        53 ~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv~~g~~~   93 (205)
                      +++....    ........+.+.+..++.++|++|+....+
T Consensus        84 ~~~~~~~----~~~~g~~~~~i~~~a~~~~~dliv~g~~~~  120 (150)
T 2pfs_A           84 GIDPAHR----WLVWGEPREEIIRIAEQENVDLIVVGSHGR  120 (150)
T ss_dssp             TCCGGGE----EEEESCHHHHHHHHHHHTTCSEEEEEEC--
T ss_pred             CCCCEEE----EEEECCHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             9875079----998178899999999973983799968999


No 102
>>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A (A:127-241)
Probab=57.37  E-value=13  Score=17.43  Aligned_cols=48  Identities=19%  Similarity=0.253  Sum_probs=24.6

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCC
Q ss_conf             986659999769850189999999739998479999976888878889986089
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKV   54 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~I   54 (205)
                      |..+|++|+.+|.  --..+.......  .+++  .++|+.....-+.++..+.
T Consensus         1 l~~kki~iiG~G~--~G~~~a~~l~~~--G~~v--~v~~r~~~~~~~~~~~~~~   48 (115)
T 2hk9_A            1 VKEKSILVLGAGG--ASRAVIYALVKE--GAKV--FLWNRTKEKAIKLAQKFPL   48 (115)
T ss_dssp             GGGSEEEEECCSH--HHHHHHHHHHHH--TCEE--EEECSSHHHHHHHTTTSCE
T ss_pred             CCCCEEEECCCHH--HHHHHHHHHHHC--CCEE--EEEECHHHHHHHHHHCCCC
T ss_conf             5666244036407--889999999964--9969--9972126777776641353


No 103
>>2owr_A UDG, uracil-DNA glycosylase; uracil-DNA glycosylase fold in the core: 3 layers (A/B/A); HET: EPE; 2.30A {Vaccinia virus} PDB: 2owq_A (A:48-218)
Probab=57.28  E-value=2.6  Score=22.40  Aligned_cols=50  Identities=18%  Similarity=0.058  Sum_probs=27.9

Q ss_pred             CCHHHHHHHHCCCCCCEEEEEEEEEEECC--CHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf             10124321000123430364311222057--2132106654231353223332444
Q gi|254780570|r   68 REHEKAILMQLSSIQPDLICLAGYMRLLS--RDFVESYKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        68 ~~~~~~l~~~l~~~~~Dliv~~g~~~il~--~~~l~~~~~~~iN~HpslLP~yrG~  121 (205)
                      +.+.+++++.|.+.+.=+.++  |+..-.  ...++..+.  .=+|||.++.+||.
T Consensus        91 e~ft~~ii~~l~~~~~ivf~L--wG~~A~~~~~~i~~~~~--~i~hpsP~s~~r~F  142 (171)
T 2owr_A           91 DKISKLLLQHITKHVSVLYCL--GKTDFSNIRAKLESPVT--TIVGYHPAARDRQF  142 (171)
T ss_dssp             HHHHHHHHHHHTTTCSEEEEE--CHHHHHHHHHHCSCCCE--EEEECCTTC----C
T ss_pred             HHHHHHHHHHHHCCCCEEEEE--ECHHHHHHHCCCCCCEE--EEECCCCCCCCCCC
T ss_conf             999999999971669739998--52787864415799969--99688886556799


No 104
>>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCNACYLATION; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2vsn_A* (A:199-363,A:543-568)
Probab=57.03  E-value=14  Score=17.39  Aligned_cols=114  Identities=11%  Similarity=0.126  Sum_probs=59.1

Q ss_pred             CCEEEEEECCC-----CHHHHHHHHHHHCCCCCCEEEEEE-ECCCCC-HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH
Q ss_conf             66599997698-----501899999997399984799999-768888-78889986089504630132332210124321
Q gi|254780570|r    3 RKNIVIFISGE-----GTNMLSLIQATKKNDYPAEIVGVF-SDNSNA-QGLVKARKEKVPTFPIPYKDYISRREHEKAIL   75 (205)
Q Consensus         3 k~riavl~SG~-----Gsnl~~Il~~~~~~~~~~eI~~Vi-sn~~da-~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~   75 (205)
                      |.||+++.|..     |..+..+++.....+  +||.+.. ++.+.. ...++.++.--....++.       ..++++.
T Consensus         7 kLRIGyvSsdf~~H~v~~~~~~ll~~~dr~~--fev~~y~~~~~~~~d~~t~~~~~~~~~~~~l~~-------~~~~e~a   77 (191)
T 2vsy_A            7 PLRVGFVSNGFGAHPTGLLTVALFEALQRRQ--PDLQMHLFATSGDDGSTLRTRLAQASTLHDVTA-------LGHLATA   77 (191)
T ss_dssp             CEEEEEEESCSSSSHHHHHHHHHHHHHHHHC--TTEEEEEEESSCCCSCHHHHHHHHTSEEEECTT-------CCHHHHH
T ss_pred             CEEEEEEHHHCCCCHHHHHHHHHHHCCCCCC--CCEEEEECCCCCCCCHHHHHHHHCCCEEEECCC-------CCHHHHH
T ss_conf             6599998244062738888676664013334--322456337887751699999862584887678-------9858999


Q ss_pred             HHCCCCCCEEEE-EEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCC-EEEE
Q ss_conf             000123430364-311222057213210665423135322333244421210000246534453-0331
Q gi|254780570|r   76 MQLSSIQPDLIC-LAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCT-VHMV  142 (205)
Q Consensus        76 ~~l~~~~~Dliv-~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~T-iH~v  142 (205)
                      +.|.+.++|+.| +.||+.=-        ...+.+..|+         |+|-++..-...||.. +.|+
T Consensus        78 ~~Ir~d~iDILvdl~g~t~~~--------rl~i~a~RpA---------PVQvs~lG~p~TtG~~~iDY~  129 (191)
T 2vsy_A           78 KHIRHHGIDLLFDLRGWGGGG--------RPEVFALRPA---------PVQVNWLAYPGTSGAPWMDYV  129 (191)
T ss_dssp             HHHHHTTCSEEEECSSCTTCS--------SCHHHHTCCS---------SEEEEESSSSSCCCCTTCCEE
T ss_pred             HHHHHCCCCEEEECCCCCCCC--------CHHHHHCCCC---------CEEEEECCCCCCCCCCCCCEE
T ss_conf             998862871899647776666--------3145542788---------757784477677777777869


No 105
>>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} (A:127-259,A:340-385)
Probab=56.62  E-value=14  Score=17.34  Aligned_cols=74  Identities=9%  Similarity=-0.036  Sum_probs=40.7

Q ss_pred             HHHHHHHHCCCCCCEEEEEEECCCCC-----HHHHHHHHCCCCEEEEECCCCCC-CCCHHHHHHHHCCCCCCEEEEEEEE
Q ss_conf             99999997399984799999768888-----78889986089504630132332-2101243210001234303643112
Q gi|254780570|r   18 LSLIQATKKNDYPAEIVGVFSDNSNA-----QGLVKARKEKVPTFPIPYKDYIS-RREHEKAILMQLSSIQPDLICLAGY   91 (205)
Q Consensus        18 ~~Il~~~~~~~~~~eI~~Visn~~da-----~~l~~a~~~~Ip~~~i~~~~~~~-~~~~~~~l~~~l~~~~~Dliv~~g~   91 (205)
                      +++.+.......+ .|+.|..|.+-.     ...+.+++.|+.......-.+.. ..++.. .+..+++.+||.|++.++
T Consensus         3 ~al~~~l~~~g~k-kVaiI~~d~~~G~~~~~~~~~~~~~~G~~vv~~~~~~~~~~~~D~~~-~i~~i~~~~pd~Vi~~~~   80 (179)
T 1pea_A            3 APLAAYLIRHYGE-RVVFIGSDYIYPRESNHVMRHLYRQHGGTVLEEIYIPLYPSDDDLQR-AVERIYQARADVVFSTVV   80 (179)
T ss_dssp             HHHHHHHHTTTCS-EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECSSCCHHHHHH-HHHHHHHHTCSEEEEECC
T ss_pred             HHHHHHHHHHCCC-EEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHH-HHHHHHHCCCCEEEEEEE
T ss_conf             9999999871784-79982267762355655466666641683578996167644201689-999987518998999963


Q ss_pred             EE
Q ss_conf             22
Q gi|254780570|r   92 MR   93 (205)
Q Consensus        92 ~~   93 (205)
                      ..
T Consensus        81 ~~   82 (179)
T 1pea_A           81 GT   82 (179)
T ss_dssp             TH
T ss_pred             CH
T ss_conf             47


No 106
>>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A (A:1-126)
Probab=56.02  E-value=14  Score=17.28  Aligned_cols=70  Identities=9%  Similarity=-0.033  Sum_probs=34.9

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             86659999769850189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      .+.|++++  |.|+--...........-.++++.|+..+++    ...+..+.....-      +       +-+.++..
T Consensus         4 ~~irvgii--G~G~~g~~~~~~~~~~~~~~~ivav~d~~~~----~~~~~~~~~~~~~------~-------~~~~~~~~   64 (126)
T 3gdo_A            4 DTIKVGIL--GYGLSGSVFHGPLLDVLDEYQISKIMTSRTE----EVKRDFPDAEVVH------E-------LEEITNDP   64 (126)
T ss_dssp             TCEEEEEE--CCSHHHHHTTHHHHTTCTTEEEEEEECSCHH----HHHHHCTTSEEES------S-------THHHHTCT
T ss_pred             CCCEEEEE--CCCHHHHHHHHHHHHCCCCCEEEEEECCCHH----HHHHHCCCCCEEC------C-------HHHHHCCC
T ss_conf             88389999--2969999999999823899189999588999----9998679984428------9-------99995599


Q ss_pred             CCEEEEEEE
Q ss_conf             430364311
Q gi|254780570|r   82 QPDLICLAG   90 (205)
Q Consensus        82 ~~Dliv~~g   90 (205)
                      ++|.++.+.
T Consensus        65 ~vd~V~i~~   73 (126)
T 3gdo_A           65 AIELVIVTT   73 (126)
T ss_dssp             TCCEEEECS
T ss_pred             CCCEEEEEC
T ss_conf             999899815


No 107
>>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, cytoplasm, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} PDB: 3ifs_A* (A:50-222)
Probab=55.56  E-value=13  Score=17.52  Aligned_cols=114  Identities=4%  Similarity=-0.074  Sum_probs=42.8

Q ss_pred             EEEEEECCCCH--HHHHHHHHHHCCC---CCCEEEEEEECCCCCHHHHH-HHHCCCC-E-EEEECCCCCCCCCH--HHHH
Q ss_conf             59999769850--1899999997399---98479999976888878889-9860895-0-46301323322101--2432
Q gi|254780570|r    5 NIVIFISGEGT--NMLSLIQATKKND---YPAEIVGVFSDNSNAQGLVK-ARKEKVP-T-FPIPYKDYISRREH--EKAI   74 (205)
Q Consensus         5 riavl~SG~Gs--nl~~Il~~~~~~~---~~~eI~~Visn~~da~~l~~-a~~~~Ip-~-~~i~~~~~~~~~~~--~~~l   74 (205)
                      .++++. =+||  ..+++.+++..--   ...-..+-+-|+-|...+.. .++.+.. + +++-.|-+.+.|.-  -...
T Consensus        29 ~vv~iG-iGGS~LG~~~l~~al~~~~~~~~~~~~~i~~~~n~Dp~~~~~~l~~l~~~~Tl~iviSKSG~T~ET~~~~~~~  107 (173)
T 3ff1_A           29 VLVVIG-IGGSYLGARAAIEXLTSSFRNSNEYPEIVFVGNHLSSTYTKELVDYLADKDFSVNVISKSGTTTEPAVAFRLF  107 (173)
T ss_dssp             EEEEEC-CGGGTHHHHHHHHHHSCSSCCCCSSCEEEEESSSCCHHHHHHHHHHGGGCCEEEEEECSSSCCHHHHHHHHHH
T ss_pred             EEEEEE-CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf             899994-5175689999999999887611678827985798744689999973176675599998998877699999999


Q ss_pred             HHHCCCC------CCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCC
Q ss_conf             1000123------43036431122205721321066542313532233324
Q gi|254780570|r   75 LMQLSSI------QPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFP  119 (205)
Q Consensus        75 ~~~l~~~------~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yr  119 (205)
                      .+.+++.      .-.+++...=..-+-+...+.-..+++.+.+..-++|-
T Consensus       108 ~~~l~~~~~~~~~~~~~vaiT~~~s~~l~~~a~~~~~~~f~~~~~vGGRfS  158 (173)
T 3ff1_A          108 KQLVEERYGKEEAQKRIFATTDKEKGALKQLATNEGYETFIVPDDVGGRYS  158 (173)
T ss_dssp             HHHHHHHHCHHHHHHHEEEEECSSCSHHHHHHHHHTCEEEECCTTCCGGGC
T ss_pred             HHHHHHCCCCHHHHCCEEEECCCCHHHHHHHHHHCCCCEECCCCCCCCCEE
T ss_conf             999997047355544789973675567898744013115516888888631


No 108
>>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} (A:184-315)
Probab=54.66  E-value=13  Score=17.52  Aligned_cols=80  Identities=9%  Similarity=-0.125  Sum_probs=41.3

Q ss_pred             HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEE--ECCCHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf             78889986089504630132332210124321000123430364311222--0572132106654231353223332444
Q gi|254780570|r   44 QGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLICLAGYMR--LLSRDFVESYKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        44 ~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv~~g~~~--il~~~~l~~~~~~~iN~HpslLP~yrG~  121 (205)
                      ...+.+++.|+|+..-+..+-.-.+.+..-+-..---.++|+++..|...  ..+..+-...+.-.|+.+|...-.|+.-
T Consensus        32 ~l~~lae~~~iPv~~t~~~kg~~~~~~p~~~G~~g~~~~aDlil~vG~~~~~~~~~~~~~~~~~i~I~~d~~~~~~~~~d  111 (132)
T 1efv_A           32 LLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVAD  111 (132)
T ss_dssp             HHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSTTSBCCCCSEEEEESCCCCHHHHTTTTTCSEEEEEESCTTCGGGGTCS
T ss_pred             HHHHHHHHHCCCEEEEHHHCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCC
T ss_conf             99999998699189747443078999176406678524888999976257567752688887799944899998644488


Q ss_pred             CC
Q ss_conf             21
Q gi|254780570|r  122 HT  123 (205)
Q Consensus       122 ~~  123 (205)
                      .+
T Consensus       112 ~~  113 (132)
T 1efv_A          112 YG  113 (132)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             78


No 109
>>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii} (A:174-332)
Probab=54.14  E-value=15  Score=17.08  Aligned_cols=104  Identities=13%  Similarity=0.081  Sum_probs=51.4

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEC--CCCCHHHH----HHHHCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf             6659999769850189999999739998479999976--88887888----99860895046301323322101243210
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSD--NSNAQGLV----KARKEKVPTFPIPYKDYISRREHEKAILM   76 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn--~~da~~l~----~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~   76 (205)
                      .+||++.+-+....+.+++..+..  ++.++.++...  .++...++    .|++.|..+...+.            +-+
T Consensus         3 glkia~vGD~~~rv~~Sl~~~~~~--~g~~~~l~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d------------~~e   68 (159)
T 2w37_A            3 GLTLTFMGDGRNNVANSLLVTGAI--LGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDD------------LDE   68 (159)
T ss_dssp             TCEEEEESCTTSHHHHHHHHHHHH--HTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESC------------HHH
T ss_pred             CCCEEEECCCCCCCCCHHHHHHHH--CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEC------------HHH
T ss_conf             444022036765654239999863--698899823423378589988876655337986999838------------999


Q ss_pred             HCCCCCCEEEEEEEEEEE-------------------CCCHHHHCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf             001234303643112220-------------------572132106654231353223332444212
Q gi|254780570|r   77 QLSSIQPDLICLAGYMRL-------------------LSRDFVESYKNKILNIHPSLLPLFPGLHTH  124 (205)
Q Consensus        77 ~l~~~~~Dliv~~g~~~i-------------------l~~~~l~~~~~~~iN~HpslLP~yrG~~~~  124 (205)
                      .++  +.|+|..-.|-..                   +..+.++..+..++=+||  ||.+||..+-
T Consensus        69 a~~--~aDviyt~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ak~~~~~mH~--LP~~r~~e~~  131 (159)
T 2w37_A           69 GLK--GSNVVYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHC--LPAFHNTDTQ  131 (159)
T ss_dssp             HHT--TCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEEC--SCCCCSSCSH
T ss_pred             HHC--CCCEEEECCEEECCCCCHHHHHHHHHCCEECHHHHHHHHCCCCCEEEECC--CCCCCCCCCC
T ss_conf             965--79999974554022210678898873648639999985089979699798--9899885433


No 110
>>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* (A:1-204)
Probab=53.39  E-value=16  Score=17.00  Aligned_cols=31  Identities=10%  Similarity=0.147  Sum_probs=18.0

Q ss_pred             CCCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             866599997698-50189999999739998479999
Q gi|254780570|r    2 IRKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGV   36 (205)
Q Consensus         2 ~k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~V   36 (205)
                      |++||+|++.|+ |+.+-..+   .+ +-+++|.++
T Consensus         1 M~mkIaViG~G~~G~~~A~~l---a~-~~G~~V~~~   32 (204)
T 3c7a_A            1 MTVKVCVCGGGNGAHTLSGLA---AS-RDGVEVRVL   32 (204)
T ss_dssp             -CEEEEEECCSHHHHHHHHHH---TT-STTEEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHH---HH-CCCCEEEEE
T ss_conf             998799986498999999999---96-689858999


No 111
>>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii DSM2661} (A:1-128)
Probab=53.25  E-value=12  Score=17.87  Aligned_cols=65  Identities=9%  Similarity=0.081  Sum_probs=34.8

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             665999976985-0189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      +.|+++.  |.| ..-+..+.+.+... ..+++.|...++.      ++..++|.+.       +       +.+.+.+.
T Consensus        13 ~irv~ii--G~gg~~g~~~~~~l~~~~-~~~i~~v~~~~~~------~~~~~~~~~~-------~-------~~~~~~~~   69 (128)
T 2yv1_A           13 NTKAIVQ--GITGRQGSFHTKKMLECG-TKIVGGVTPGKGG------QNVHGVPVFD-------T-------VKEAVKET   69 (128)
T ss_dssp             TCCEEEE--TTTSHHHHHHHHHHHHTT-CCEEEEECTTCTT------CEETTEEEES-------S-------HHHHHHHH
T ss_pred             CCEEEEE--CCCCCHHHHHHHHHHHHC-CCEEEEECCCCCC------CEEECCCCCC-------C-------HHHHCCCC
T ss_conf             9859998--998847689999999819-9778877799886------4773812557-------4-------56620555


Q ss_pred             CCEEEEEEE
Q ss_conf             430364311
Q gi|254780570|r   82 QPDLICLAG   90 (205)
Q Consensus        82 ~~Dliv~~g   90 (205)
                      ++|+++.+.
T Consensus        70 ~~d~V~i~~   78 (128)
T 2yv1_A           70 DANASVIFV   78 (128)
T ss_dssp             CCCEEEECC
T ss_pred             CCCEEEEEE
T ss_conf             663699960


No 112
>>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter} (A:1-195)
Probab=53.23  E-value=16  Score=16.98  Aligned_cols=31  Identities=16%  Similarity=0.300  Sum_probs=18.3

Q ss_pred             CCC-CEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             986-6599997698-50189999999739998479999
Q gi|254780570|r    1 MIR-KNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGV   36 (205)
Q Consensus         1 M~k-~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~V   36 (205)
                      ||+ +||+|+.+|. |+.+-..+-   ..  .++|.++
T Consensus         1 M~~~mkI~IiGaG~~G~~~A~~La---~~--G~~V~l~   33 (195)
T 1bg6_A            1 MIESKTYAVLGLGNGGHAFAAYLA---LK--GQSVLAW   33 (195)
T ss_dssp             ---CCEEEEECCSHHHHHHHHHHH---HT--TCEEEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHH---HC--CCEEEEE
T ss_conf             998996999888899999999999---78--9958999


No 113
>>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} (A:1-132)
Probab=53.14  E-value=16  Score=16.97  Aligned_cols=58  Identities=17%  Similarity=0.084  Sum_probs=34.3

Q ss_pred             CCCEEEEEECCC-CHH-HHHHHHHHHCCCCCCEEEEEEECCCCC------HHHHHHHHCCCCEEEEECCC
Q ss_conf             866599997698-501-899999997399984799999768888------78889986089504630132
Q gi|254780570|r    2 IRKNIVIFISGE-GTN-MLSLIQATKKNDYPAEIVGVFSDNSNA------QGLVKARKEKVPTFPIPYKD   63 (205)
Q Consensus         2 ~k~riavl~SG~-Gsn-l~~Il~~~~~~~~~~eI~~Visn~~da------~~l~~a~~~~Ip~~~i~~~~   63 (205)
                      .++|+++.+||+ .|. +..++....    +..+.++..+.+..      ...+.|+..|+|.+.++..+
T Consensus        24 ~~~~v~v~~SGG~DS~~~~~ll~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~a~~l~i~~~~i~~~~   89 (132)
T 1xng_A           24 GFKKVVYGLSGGLDSAVVGVLCQKVF----KENAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYSIAP   89 (132)
T ss_dssp             TCCCEEEECCSSHHHHHHHHHHHHHH----GGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECCCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHH----HHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHH
T ss_conf             99829997878889999999999862----4330787225301561133679999998531340000137


No 114
>>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis} (A:1-96,A:208-267)
Probab=52.98  E-value=16  Score=16.95  Aligned_cols=69  Identities=17%  Similarity=0.190  Sum_probs=37.4

Q ss_pred             CCCEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             8665999976985--01899999997399984799999768888788899860895046301323322101243210001
Q gi|254780570|r    2 IRKNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         2 ~k~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      |+..|+||=||-|  |-++.|.+..-    ..++ .-+.|+..++       +|-..       ...-..+-.++.+.+.
T Consensus         2 ~~~pIgvfDSGvGGLtV~~~i~~~lP----~~~~-iY~gD~a~~P-------YG~ks-------~~~i~~~~~~~~~~l~   62 (156)
T 2gzm_A            2 LNRAIGVIDSGVGGLTVAKELIRQLP----KERI-IYLGDTARCP-------YGPRS-------REEVRQFTWEMTEHLL   62 (156)
T ss_dssp             TTSCEEEEESSSTTHHHHHHHHHHCT----TSCE-EEEECTTTCC-------CTTSC-------HHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHCC----CCCE-EEEECCCCCC-------CCCCC-------HHHHHHHHHHHHHHHH
T ss_conf             99978999889667999999999789----9998-9995378999-------89999-------9999999999999998


Q ss_pred             CCCCEEEEEE
Q ss_conf             2343036431
Q gi|254780570|r   80 SIQPDLICLA   89 (205)
Q Consensus        80 ~~~~Dliv~~   89 (205)
                      +.+++++|.|
T Consensus        63 ~~~~k~iViA   72 (156)
T 2gzm_A           63 DLNIKMLVIA   72 (156)
T ss_dssp             TTTCSEEEEC
T ss_pred             HHCCCEEEEC
T ss_conf             6167879972


No 115
>>2q7x_A UPF0052 protein SP_1565; NP_346012.1, uncharacterized protein SP_1565, structural genomics, joint center for structural genomics; HET: MLY MSE; 2.00A {Streptococcus pneumoniae TIGR4} (A:1-46,A:122-130,A:172-326)
Probab=52.70  E-value=16  Score=16.93  Aligned_cols=80  Identities=19%  Similarity=0.299  Sum_probs=42.6

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      .+||+++  |.||.|-.++...+.  +..++..|+|--.| +|     +-|.-+-.+.+.   .+.....+.++.|++  
T Consensus         4 ~~~iv~i--GGGtGl~~~l~glk~--~~~~itaiVtv~Dd-GG-----ssG~l~~~l~~~---~~~~a~p~ai~AI~~--   68 (210)
T 2q7x_A            4 XPXITVI--GGGTGSPVILXSLRE--XDVEIAAIVTVADD-GG-----SSGELTGXIYPS---SDPLASRRVVQTILE--   68 (210)
T ss_dssp             CCEEEEE--CCCTTHHHHHHHHHH--SSCEEEEEECCBSC-GG-----GGSSCCSEEEES---BSCCBCSHHHHHHHH--
T ss_pred             CCEEEEE--CCCCCHHHHHHHHHH--CCCCEEEEEECCCC-CC-----CCEEHCEEEECC---CCCCCCHHHHHHHHH--
T ss_conf             8849998--785228999999850--99985999988408-85-----522127589915---488779999999961--


Q ss_pred             CEEEEEE-E--EEEECCC
Q ss_conf             3036431-1--2220572
Q gi|254780570|r   83 PDLICLA-G--YMRLLSR   97 (205)
Q Consensus        83 ~Dliv~~-g--~~~il~~   97 (205)
                      .|+||+. |  |..|+|.
T Consensus        69 ADlIvlgPGSlyTSIiPn   86 (210)
T 2q7x_A           69 SDXIVLGPGSLFTSILPN   86 (210)
T ss_dssp             CSEEEECSSCCCCCCHHH
T ss_pred             CCEEEECCCCCHHHHHHH
T ss_conf             998999799607766678


No 116
>>1vjt_A Alpha-glucosidase; TM0752, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics, hydrolase; HET: NAD; 2.50A {Thermotoga maritima} (A:1-195,A:414-483)
Probab=52.68  E-value=9.4  Score=18.52  Aligned_cols=39  Identities=13%  Similarity=0.043  Sum_probs=22.4

Q ss_pred             CCC-CEEEEEECCC-CHHHHHHHHHHHCCCCCCEE-EEEEEC
Q ss_conf             986-6599997698-50189999999739998479-999976
Q gi|254780570|r    1 MIR-KNIVIFISGE-GTNMLSLIQATKKNDYPAEI-VGVFSD   39 (205)
Q Consensus         1 M~k-~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI-~~Visn   39 (205)
                      |++ +||+|+++|+ |+.+..++......-+..++ ..++.+
T Consensus         9 m~~~~KIaVIGaGs~G~alA~~la~~g~~Vi~~d~~~~~~~d   50 (265)
T 1vjt_A            9 HHHHXKISIIGAGSVRFALQLVGDIAQTEELSREDTHIYXXD   50 (265)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHHSTTTCSTTEEEEEEC
T ss_pred             CCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf             567429999996844352999999985175188878899988


No 117
>>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} (A:1-210)
Probab=52.58  E-value=16  Score=16.91  Aligned_cols=76  Identities=16%  Similarity=0.090  Sum_probs=40.5

Q ss_pred             CCCEEEEEECCCCHHHH-HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             86659999769850189-99999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    2 IRKNIVIFISGEGTNML-SLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~-~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      .+.|+++.  |.|.-.. .++..... .-.++++.|+. ......-..++.++++......  +   ++    +.+.++.
T Consensus        82 ~~irvgiI--G~G~~g~~~~~~~l~~-~~~~~ivav~d-~~~~~~~~~~~~~~~~~~~~~~--~---~d----~~ell~~  148 (210)
T 1h6d_A           82 RRFGYAIV--GLGKYALNQILPGFAG-CQHSRIEALVS-GNAEKAKIVAAEYGVDPRKIYD--Y---SN----FDKIAKD  148 (210)
T ss_dssp             CCEEEEEE--CCSHHHHHTHHHHTTT-CSSEEEEEEEC-SCHHHHHHHHHHTTCCGGGEEC--S---SS----GGGGGGC
T ss_pred             CCEEEEEE--ECHHHHHHHHHHHHHH-CCCCEEEEEEC-CCHHHHHHHHHHHCCCCCCCCC--C---CC----HHHHHCC
T ss_conf             97179999--4869999999999972-98988999987-9999999999984899556755--5---99----9999559


Q ss_pred             CCCEEEEEEE
Q ss_conf             3430364311
Q gi|254780570|r   81 IQPDLICLAG   90 (205)
Q Consensus        81 ~~~Dliv~~g   90 (205)
                      .++|+|+.+.
T Consensus       149 ~~vD~V~iat  158 (210)
T 1h6d_A          149 PKIDAVYIIL  158 (210)
T ss_dssp             TTCCEEEECS
T ss_pred             CCCCEEEEEC
T ss_conf             9998899919


No 118
>>2ez9_A Pyruvate oxidase; TPP enzyme, reaction intermediate analogue, oxidoreductase; HET: TDK FAD; 1.60A {Lactobacillus plantarum} (A:189-368,A:555-603)
Probab=51.65  E-value=17  Score=16.81  Aligned_cols=102  Identities=15%  Similarity=0.096  Sum_probs=51.2

Q ss_pred             CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCH-----------HHHHHHHCCCCC
Q ss_conf             501899999997399984799999768888788899860895046301323322101-----------243210001234
Q gi|254780570|r   14 GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREH-----------EKAILMQLSSIQ   82 (205)
Q Consensus        14 Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~-----------~~~l~~~l~~~~   82 (205)
                      ...++.+.+...+-+-+.=+++.-+.+......+.|++.|+|+..-...+-.-.+..           .....+.++  +
T Consensus        11 ~~~Ie~a~elL~~AkrPvIi~G~g~~~a~~~l~~lae~~giPv~tt~~gkg~~pe~hP~~~G~~G~~~~~~~~~~i~--~   88 (229)
T 2ez9_A           11 VQAVTRLTQTLLAAERPLIYYGIGARKAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGSANRVAQKPANEALA--Q   88 (229)
T ss_dssp             HHHHHHHHHHHHHCSSEEEEECGGGTTCHHHHHHHHHHHTCCEEECGGGTTSSCTTCTTBCCCCSSSSCHHHHHHHH--H
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCC--C
T ss_conf             99998887766533698533444265899999999998699889740234334444333222322234313331022--3


Q ss_pred             CEEEEEEEEEEEC--CCHHHH-CCCCCEEECCCCCCCC
Q ss_conf             3036431122205--721321-0665423135322333
Q gi|254780570|r   83 PDLICLAGYMRLL--SRDFVE-SYKNKILNIHPSLLPL  117 (205)
Q Consensus        83 ~Dliv~~g~~~il--~~~~l~-~~~~~~iN~HpslLP~  117 (205)
                      .|+|++.|....-  +..+.. ..+.-.|+++|.-+-.
T Consensus        89 aDlIL~iG~~l~~~~t~~~~~~~~k~I~Id~dp~~i~~  126 (229)
T 2ez9_A           89 ADVVLFVGNNYPFAEVSKAFKNTRYFLQIDIDPAKLGK  126 (229)
T ss_dssp             CSEEEEESCCCTTTTTTTTTTTCSEEEEEESCGGGTTS
T ss_pred             CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
T ss_conf             20233200111123322222455555578899899455


No 119
>>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A* (A:1-117,A:229-290)
Probab=51.48  E-value=17  Score=16.80  Aligned_cols=68  Identities=12%  Similarity=0.105  Sum_probs=35.4

Q ss_pred             CCEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             665999976985--018999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    3 RKNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         3 k~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      +..|+||=||-|  |-++.|.+..-    +.++. -+.|+...+       +|-...       ..-..+-.++.+.+.+
T Consensus        24 ~~~IgifDSG~GGLtv~~~i~~~lP----~~~~i-y~~D~a~~P-------YG~ks~-------~~i~~~~~~~~~~l~~   84 (179)
T 2vvt_A           24 QEAIGLIDSGVGGLTVLKEALKQLP----NERLI-YLGDTARCP-------YGPRPA-------EQVVQFTWEMADFLLK   84 (179)
T ss_dssp             GSCEEEEESSSTTHHHHHHHHHHCT----TSCEE-EEECTTTCC-------CTTSCH-------HHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHCC----CCCEE-EEECCCCCC-------CCCCCH-------HHHHHHHHHHHHHHHH
T ss_conf             9968999789688999999999789----99989-994488999-------898999-------9999999999999975


Q ss_pred             CCCEEEEEE
Q ss_conf             343036431
Q gi|254780570|r   81 IQPDLICLA   89 (205)
Q Consensus        81 ~~~Dliv~~   89 (205)
                      .+++++|.|
T Consensus        85 ~~~~~iViA   93 (179)
T 2vvt_A           85 KRIKMLVIA   93 (179)
T ss_dssp             TTCSEEEEC
T ss_pred             CCCCCEEEE
T ss_conf             388604762


No 120
>>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate assisted catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* (A:1-222,A:411-438)
Probab=51.33  E-value=16  Score=16.97  Aligned_cols=111  Identities=14%  Similarity=0.065  Sum_probs=48.3

Q ss_pred             CCEEEEEEC--------------CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCC--
Q ss_conf             665999976--------------9850189999999739998479999976888878889986089504630132332--
Q gi|254780570|r    3 RKNIVIFIS--------------GEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYIS--   66 (205)
Q Consensus         3 k~riavl~S--------------G~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~--   66 (205)
                      ++||+++..              |.++-+..+.+...+.  +++|..+.....+..........++.....+......  
T Consensus        20 ~mkIl~i~~~~~p~~~~~~~~~GG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (250)
T 3c48_A           20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQ--GIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLS   97 (250)
T ss_dssp             CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHT--TCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSCC
T ss_pred             CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCEECCCCEEEEECCCCCCCCCC
T ss_conf             878999846536300059998678999999999999977--996999945898876330112697289980477623344


Q ss_pred             ---------CCCHHHHHHHHCCCCCCEEEEEEEEEEECCCHH-HHCCCCC-EEECCCCCC
Q ss_conf             ---------210124321000123430364311222057213-2106654-231353223
Q gi|254780570|r   67 ---------RREHEKAILMQLSSIQPDLICLAGYMRLLSRDF-VESYKNK-ILNIHPSLL  115 (205)
Q Consensus        67 ---------~~~~~~~l~~~l~~~~~Dliv~~g~~~il~~~~-l~~~~~~-~iN~HpslL  115 (205)
                               .......+...++..++|+|.+.++.--+...+ ....+.+ ++-+|-...
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~  157 (250)
T 3c48_A           98 KEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAA  157 (250)
T ss_dssp             GGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf             766578886532789999984279955999877422789988765048852542145443


No 121
>>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} (A:)
Probab=51.09  E-value=17  Score=16.76  Aligned_cols=38  Identities=11%  Similarity=0.194  Sum_probs=20.8

Q ss_pred             CEEEEEECCCCHHH-----------------HHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf             65999976985018-----------------9999999739998479999976888
Q gi|254780570|r    4 KNIVIFISGEGTNM-----------------LSLIQATKKNDYPAEIVGVFSDNSN   42 (205)
Q Consensus         4 ~riavl~SG~Gsnl-----------------~~Il~~~~~~~~~~eI~~Visn~~d   42 (205)
                      ...+||+.|.||=+                 +-+++...+... .++..|+++..+
T Consensus         7 ~~aIILAaG~gtRl~~~~pK~ll~i~gkpli~~~i~~l~~~~~-~~~iiv~~~~~~   61 (231)
T 1vgw_A            7 NIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFERHEA-VDLTVVVVSPED   61 (231)
T ss_dssp             EEEEEECC----------CCSCCEETTEEHHHHHHHHHHTCTT-CCEEEEECCTTC
T ss_pred             CEEEEECCCCCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHCC-CCCCEEECCCHH
T ss_conf             0899976987522897998037179987699999999986253-232102215022


No 122
>>3hft_A WBMS, polysaccharide deacetylase involved in O- antigen biosynthesis; NP_886680.1, structural genomics; HET: MSE; 1.90A {Bordetella bronchiseptica} (A:)
Probab=50.59  E-value=9.4  Score=18.51  Aligned_cols=49  Identities=8%  Similarity=-0.096  Sum_probs=27.9

Q ss_pred             ECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEE
Q ss_conf             7698501899999997399984799999768888788899860895046
Q gi|254780570|r   10 ISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFP   58 (205)
Q Consensus        10 ~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~   58 (205)
                      .|+.|-+.+++++++-+--..++...-=+=..+...+....+.||++..
T Consensus       100 ~~~~g~~~~~Vldy~L~i~P~a~s~RSHsl~~~s~Il~~~~ergi~~es  148 (257)
T 3hft_A          100 AGAHAEGVQEILDRTLELAPGCVSVRSHSLVQATSILNXFGERRLRYDC  148 (257)
T ss_dssp             HSCCSCCHHHHHHHHHTTSTTCCEECCGGGCCCHHHHHHHHHTTCCEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHCCCCEEE
T ss_conf             4169899999999999875014321288624488899999984993661


No 123
>>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} (A:1-127)
Probab=50.47  E-value=3.5  Score=21.49  Aligned_cols=32  Identities=25%  Similarity=0.236  Sum_probs=17.4

Q ss_pred             CCEEEEEEECCCCCHHHHHHH----HCCCCEEEEEC
Q ss_conf             847999997688887888998----60895046301
Q gi|254780570|r   30 PAEIVGVFSDNSNAQGLVKAR----KEKVPTFPIPY   61 (205)
Q Consensus        30 ~~eI~~Visn~~da~~l~~a~----~~~Ip~~~i~~   61 (205)
                      +-+.+.++|-|+-++|=..|+    ..|||+.++.-
T Consensus        64 ~pDf~I~isPN~aaPGP~~ARE~l~~~giP~IvI~D   99 (127)
T 1qv9_A           64 EPDFIVYGGPNPAAPGPSKAREXLADSEYPAVIIGD   99 (127)
T ss_dssp             CCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEE
T ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECC
T ss_conf             899899978998999957799998747998799758


No 124
>>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12} (A:1-125)
Probab=50.32  E-value=17  Score=16.68  Aligned_cols=71  Identities=11%  Similarity=-0.001  Sum_probs=39.0

Q ss_pred             CEEEEEECCCCHHHHHH-HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             65999976985018999-99997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    4 KNIVIFISGEGTNMLSL-IQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~I-l~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      .|+++.  |.|.-.... +.+... .-.++++.|++.++. ..-..+++++++...      .+       ..+.+...+
T Consensus         3 lrvgii--G~G~~~~~~~~~~~~~-~~~~~i~av~d~~~~-~~~~~~~~~~~~~~~------~~-------~~~l~~~~~   65 (125)
T 3f4l_A            3 INCAFI--GFGKSTTRYHLPYVLN-RKDSWHVAHIFRRHA-KPEEQAPIYSHIHFT------SD-------LDEVLNDPD   65 (125)
T ss_dssp             EEEEEE--CCSHHHHHHTHHHHTT-CTTTEEEEEEECSSC-CGGGGSGGGTTCEEE------SC-------THHHHTCTT
T ss_pred             EEEEEE--ECCHHHHHHHHHHHHC-CCCCEEEEEEECCHH-HHHHHHHHCCCCCEE------CC-------HHHHHCCCC
T ss_conf             629999--3779999999999973-899759999989879-999999875998356------89-------999956999


Q ss_pred             CEEEEEEEE
Q ss_conf             303643112
Q gi|254780570|r   83 PDLICLAGY   91 (205)
Q Consensus        83 ~Dliv~~g~   91 (205)
                      +|+++.+..
T Consensus        66 id~v~i~~~   74 (125)
T 3f4l_A           66 VKLVVVCTH   74 (125)
T ss_dssp             EEEEEECSC
T ss_pred             CCEEEECCC
T ss_conf             889985043


No 125
>>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} (A:362-473,A:625-671)
Probab=50.23  E-value=17  Score=16.67  Aligned_cols=124  Identities=16%  Similarity=0.230  Sum_probs=54.1

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             98665999976985018999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      |.+++++|..+|- +.|.+-+..-   +..++|.+ +=-.+..++.-. ....+|...    .+   ..+.......++.
T Consensus        10 ~~~~~VaVIGaGp-AGL~aA~~la---~~G~~V~v-lEk~~~iGG~i~-~~~~ip~~~----~~---~~~l~~~~~~le~   76 (159)
T 1ps9_A           10 VQKKNLAVVGAGP-AGLAFAINAA---ARGHQVTL-FDAHSEIGGQFN-IAKQIPGKE----EF---YETLRYYRRMIEV   76 (159)
T ss_dssp             SSCCEEEEECCSH-HHHHHHHHHH---TTTCEEEE-EESSSSSCTTHH-HHTTSTTCT----TH---HHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHH---HHCCCEEE-EEECCCCCCEEE-ECCCCCCCH----HH---HHHHHHHHHHHHH
T ss_conf             4464599989747-7899999998---72176479-942154330573-213576412----45---6678999987552


Q ss_pred             CCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCC--CCCCCCCHHCCCCCCCCCCEEEEC
Q ss_conf             343036431122205721321066542313532233324--442121000024653445303312
Q gi|254780570|r   81 IQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFP--GLHTHRRVLQSGIKITGCTVHMVT  143 (205)
Q Consensus        81 ~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yr--G~~~~~~ai~~g~~~~G~TiH~v~  143 (205)
                      ...++..    ..-+.......+ ..+++.+|...+.+.  |..| ++++..-.--+|-|+|.+-
T Consensus        77 ~Gv~~~~----~~~v~~~~~~~~-~~vi~a~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  135 (159)
T 1ps9_A           77 TGVTLKL----NHTVTADQLQAF-DETILASGIVPRTPPIDGQEP-NRALAQPLIDSGKTVHLIG  135 (159)
T ss_dssp             HTCEEEE----SCCCCSSSSCCS-SEEEECCCEEECCCCCBCEEE-CCTTHHHHHTTTCCEEECG
T ss_pred             HHCEEEE----ECCCCHHHCCCC-CCEEEECCCCCCCCCCCCCCC-CHHHHHHHHHCCCCEEEEC
T ss_conf             2010421----012331110046-844983277556699888886-7899999997599899986


No 126
>>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway; 2.10A {Thermus thermophilus HB8} PDB: 2ywc_A* (A:189-382)
Probab=50.22  E-value=17  Score=16.67  Aligned_cols=57  Identities=16%  Similarity=0.191  Sum_probs=34.2

Q ss_pred             CCCEEEEEECCC-CHH-HHHHHHHHHCCCCCCEEEEEEEC--CCCC----HHHHHHHHCCCCEEEEECCC
Q ss_conf             866599997698-501-89999999739998479999976--8888----78889986089504630132
Q gi|254780570|r    2 IRKNIVIFISGE-GTN-MLSLIQATKKNDYPAEIVGVFSD--NSNA----QGLVKARKEKVPTFPIPYKD   63 (205)
Q Consensus         2 ~k~riavl~SG~-Gsn-l~~Il~~~~~~~~~~eI~~Visn--~~da----~~l~~a~~~~Ip~~~i~~~~   63 (205)
                      ...|+++.+||+ .|. +..++...     ..++.+|..+  ....    ...+.++.++++...++..+
T Consensus        20 ~~~~v~v~~SGG~DS~v~l~l~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~   84 (194)
T 2ywb_A           20 GKDRVLLAVSGGVDSSTLALLLAKA-----GVDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDAKE   84 (194)
T ss_dssp             TTSEEEEEECSSHHHHHHHHHHHHH-----TCEEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEECHH
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHH-----HHHEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECH
T ss_conf             9860799833665547899999974-----3301799946886676508899986520682699997025


No 127
>>3dla_A Glutamine-dependent NAD(+) synthetase; glutaminase, ammonia tunneling, enzyme, glutamine-amido transferase, ATP-binding, ligase; HET: NXX ONL; 2.35A {Mycobacterium tuberculosis} (A:323-553)
Probab=49.48  E-value=18  Score=16.59  Aligned_cols=61  Identities=21%  Similarity=0.203  Sum_probs=34.4

Q ss_pred             CCEEEEEECCC-CH-HHHHHHH-HHHCCCCCCEEEEEEECC------CC-CHHHHHHHHCCCCEEEEECCC
Q ss_conf             66599997698-50-1899999-997399984799999768------88-878889986089504630132
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQ-ATKKNDYPAEIVGVFSDN------SN-AQGLVKARKEKVPTFPIPYKD   63 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~-~~~~~~~~~eI~~Visn~------~d-a~~l~~a~~~~Ip~~~i~~~~   63 (205)
                      ++|++|.+||+ .| .+..++. .............+.+..      ++ ..+-..|+++|++.++.+..+
T Consensus        39 ~~kv~v~~SGG~DS~vl~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~lgi~~~~~~~~~  109 (231)
T 3dla_A           39 YPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIGD  109 (231)
T ss_dssp             SCEEEEECCSSHHHHHHHHHHHHHHHHTTCCGGGEEEEECCC-----CTHHHHHHHHHHHTCEEEECCCHH
T ss_pred             CCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHH
T ss_conf             65144322245430688999998632124776534887402243331208889866514444321114178


No 128
>>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli K12} (A:152-285)
Probab=49.14  E-value=18  Score=16.55  Aligned_cols=98  Identities=13%  Similarity=0.078  Sum_probs=57.2

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCC-CCEEEEEEE--CCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             66599997698-5018999999973999-847999997--6888878889986089504630132332210124321000
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDY-PAEIVGVFS--DNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL   78 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~-~~eI~~Vis--n~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l   78 (205)
                      .+|+++..-.+ +.-+.+++....  .+ ..++.++.-  -.++...++.|++.|..+.....-            .+.+
T Consensus         3 g~~i~~vGD~~~~rv~~Sl~~~~~--~l~g~~v~l~~P~~~~~~~~~~~~~~~~g~~i~~~~d~------------~~a~   68 (134)
T 3csu_A            3 NLHVAMVGDLKYGRTVHSLTQALA--KFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSI------------EEVM   68 (134)
T ss_dssp             SCEEEEESCTTTCHHHHHHHHHHH--TSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCG------------GGTT
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHH--HCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCH------------HHCC
T ss_conf             875899953766733899999986--35677699969861254134320010012433321103------------3215


Q ss_pred             CCCCCEEEEEEEE--E-------------EECCCHHHHCCCCCEEECCCCCCCCC
Q ss_conf             1234303643112--2-------------20572132106654231353223332
Q gi|254780570|r   79 SSIQPDLICLAGY--M-------------RLLSRDFVESYKNKILNIHPSLLPLF  118 (205)
Q Consensus        79 ~~~~~Dliv~~g~--~-------------~il~~~~l~~~~~~~iN~HpslLP~y  118 (205)
                      +  +.|+|..-.|  +             ..+..++++..+..++=+||  ||+.
T Consensus        69 ~--~aDviyt~~w~~~~~~~~~~~~~~~~y~v~~~~l~~~~~~~ivmH~--LPRg  119 (134)
T 3csu_A           69 A--EVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHP--LPRV  119 (134)
T ss_dssp             T--TCSEEEECC-----------------CCBCGGGGTTCCTTCEEECC--SCCS
T ss_pred             C--CCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEC--CCCC
T ss_conf             6--7754531143022201000345677776239999627999499628--9997


No 129
>>1gso_A Protein (glycinamide ribonucleotide synthetase); GAR-SYN, ATP-grAsp, purine de novo biosynthetic pathway, substrate channeling, ligase; 1.60A {Escherichia coli} (A:1-120,A:193-431)
Probab=48.95  E-value=6.1  Score=19.83  Aligned_cols=81  Identities=19%  Similarity=0.177  Sum_probs=38.8

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             65999976985018999999973999847999997688887888998608950463013233221012432100012343
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP   83 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~   83 (205)
                      |||.|+  |+|--...++.+.+  ++++.+..+.++.+++.....|..    +...++.+       -+.+.+..++.++
T Consensus         3 ~kvli~--g~G~~~~~~~~aa~--~~g~~~~v~~~~~~~~~~~~~a~~----~~~~~~~d-------~~~i~~~~~~~~~   67 (359)
T 1gso_A            3 MKVLVI--GNGGREHALAWKAA--QSPLVETVFVAPGNAGTALEPALQ----NVAIGVTD-------IPALLDFAQNEKI   67 (359)
T ss_dssp             EEEEEE--ECSHHHHHHHHHHT--TCTTEEEEEEEECCHHHHHSTTEE----ECCCCTTC-------HHHHHHHHHHTTC
T ss_pred             CEEEEE--CCCHHHHHHHHHHH--HCCCCCEEEEECCCHHHCCCCCCE----EEEECCCC-------HHHHHHHHHHHCC
T ss_conf             789998--92999999999998--689988899978981436646341----78868999-------9999999999697


Q ss_pred             EEEEEEEEEEECCCHHH
Q ss_conf             03643112220572132
Q gi|254780570|r   84 DLICLAGYMRLLSRDFV  100 (205)
Q Consensus        84 Dliv~~g~~~il~~~~l  100 (205)
                      |.++. ||..+....+.
T Consensus        68 d~v~~-~~~~~~~~~~~   83 (359)
T 1gso_A           68 DLTIV-GPEAPLVKGVV   83 (359)
T ss_dssp             SEEEE-CSHHHHHTTHH
T ss_pred             CEEEE-CCCHHHHHHHH
T ss_conf             99998-97188888999


No 130
>>2i6g_A Putative methyltransferase; 16420133, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MLY; 1.90A {Salmonella typhimurium LT2} (A:)
Probab=48.70  E-value=18  Score=16.51  Aligned_cols=79  Identities=14%  Similarity=0.022  Sum_probs=46.1

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC--HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             6599997698501899999997399984799999768888--78889986089504630132332210124321000123
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNA--QGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da--~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      .++.-++.|.|..+..+.+.      ..++.+|=- .+..  ...+.++..+++...+...+.          .+.....
T Consensus        33 ~~VLDiGcG~G~~~~~la~~------g~~v~gvD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~----------~~~~~~~   95 (199)
T 2i6g_A           33 GRTLDLGCGNGRNSLYLAAN------GYDVTAWDX-NPASXANLERIXAAEGLDNLQTDLVDL----------NTLTFDG   95 (199)
T ss_dssp             CEEEEETCTTSHHHHHHHHT------TCEEEEEES-CHHHHHHHHHHHHHTTCTTEEEEECCT----------TTCCCCC
T ss_pred             CCEEEECCCCCHHHHHHHHC------CCCEECCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCC----------CCCCCCC
T ss_conf             97899838887889999873------872232559-999999999852213765101223442----------2355445


Q ss_pred             CCEEEEEEEEEEECCCHH
Q ss_conf             430364311222057213
Q gi|254780570|r   82 QPDLICLAGYMRLLSRDF   99 (205)
Q Consensus        82 ~~Dliv~~g~~~il~~~~   99 (205)
                      ..|+|++.+-..-++++-
T Consensus        96 ~fD~V~~~~~~~~~~~~~  113 (199)
T 2i6g_A           96 EYDFILSTVVXXFLEAQT  113 (199)
T ss_dssp             CEEEEEEESCGGGSCTTH
T ss_pred             CEEEEEEEEEEEECCHHH
T ss_conf             146999822676088889


No 131
>>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} (A:1-170,A:362-381)
Probab=48.64  E-value=18  Score=16.50  Aligned_cols=41  Identities=17%  Similarity=0.064  Sum_probs=24.1

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC
Q ss_conf             9866599997698501899999997399984799999768888
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNA   43 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da   43 (205)
                      |.+.|++|+. .+|-.-..|++.. .+...++++.+.+++..+
T Consensus        17 M~~~kVaIiG-ATGyvG~ELirlL-~~HP~~ei~~l~aS~~sa   57 (190)
T 3hsk_A           17 MSVKKAGVLG-ATGSVGQRFILLL-SKHPEFEIHALGASSRSA   57 (190)
T ss_dssp             -CCEEEEEET-TTSHHHHHHHHHH-TTCSSEEEEEEEECTTTT
T ss_pred             CCCCEEEEEC-CHHHHHHHHHHHH-HCCCCCEEEEEEECCCCC
T ss_conf             7601799999-7009999999999-659997168998747658


No 132
>>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis} (A:1-170,A:380-450)
Probab=48.43  E-value=19  Score=16.48  Aligned_cols=35  Identities=14%  Similarity=0.091  Sum_probs=18.8

Q ss_pred             CCCCEEEEEECCC-CHHHHHHHHHHHC-CCCCCEEEEE
Q ss_conf             9866599997698-5018999999973-9998479999
Q gi|254780570|r    1 MIRKNIVIFISGE-GTNMLSLIQATKK-NDYPAEIVGV   36 (205)
Q Consensus         1 M~k~riavl~SG~-Gsnl~~Il~~~~~-~~~~~eI~~V   36 (205)
                      |.++||+|++.|+ |+.+ ++.-+... .....+|+++
T Consensus         3 M~~~KIaVIGaGsvG~~l-a~~~~~~~~~~~~~eV~l~   39 (241)
T 3fef_A            3 LDQIKIAYIGGGSQGWAR-SLXSDLSIDERXSGTVALY   39 (241)
T ss_dssp             CCCEEEEEETTTCSSHHH-HHHHHHHHCSSCCEEEEEE
T ss_pred             CCCCEEEEECCCHHHHHH-HHHHHHHHCCCCCCEEEEE
T ss_conf             778779999977478899-9999997345668829998


No 133
>>3fci_A UDG, uracil-DNA glycosylase; DNA repair, alternative splicing, disease mutation, DNA damage, glycosidase, HOST- virus interaction, hydrolase; HET: 3FI; 1.27A {Homo sapiens} PDB: 1emh_A* 1emj_A* 1q3f_A* 1ssp_E* 1ugh_E 1akz_A* 2oxm_A* 2oyt_A* 3fcf_A* 2hxm_A* 3fck_B* 3fcl_A* 2ssp_E* 1yuo_A 4skn_E* 1okb_A (A:)
Probab=47.81  E-value=7.5  Score=19.19  Aligned_cols=53  Identities=19%  Similarity=0.380  Sum_probs=33.2

Q ss_pred             CCHHHHHHHHCCCCCCEEEEEEEEEEECC--CHHHHCCCCCEE-ECCCCCCCCCCCC
Q ss_conf             10124321000123430364311222057--213210665423-1353223332444
Q gi|254780570|r   68 REHEKAILMQLSSIQPDLICLAGYMRLLS--RDFVESYKNKIL-NIHPSLLPLFPGL  121 (205)
Q Consensus        68 ~~~~~~l~~~l~~~~~Dliv~~g~~~il~--~~~l~~~~~~~i-N~HpslLP~yrG~  121 (205)
                      +.+.+.+++.|.+.+..+|++. |+..-.  ..+++..+..++ --|||.|-.+||.
T Consensus       142 e~ft~~ii~~l~~~~~~iVf~L-wG~~A~~~~~~i~~~~h~il~~~HPSpls~~~~F  197 (223)
T 3fci_A          142 EQFTDAVVSWLNQNSNGLVFLL-WGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGF  197 (223)
T ss_dssp             HHHHHHHHHHHHHHCCSCEEEE-ESHHHHHHTTTCCTTTSEEEEECCSSTTTGGGTT
T ss_pred             HHHHHHHHHHHHCCCCCEEEEE-HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
T ss_conf             9999999999866477839874-3877999987515789869980699820237898


No 134
>>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, binary complex; HET: GDP; 2.40A {Mycobacterium smegmatis str} PDB: 2gej_A* (A:1-197,A:367-406)
Probab=47.57  E-value=14  Score=17.42  Aligned_cols=114  Identities=11%  Similarity=0.117  Sum_probs=56.5

Q ss_pred             CCEEEEEECCC-----C--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCC----CCHH
Q ss_conf             66599997698-----5--01899999997399984799999768888788899860895046301323322----1012
Q gi|254780570|r    3 RKNIVIFISGE-----G--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISR----REHE   71 (205)
Q Consensus         3 k~riavl~SG~-----G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~----~~~~   71 (205)
                      ++||+++.+..     |  +-+..+++.....  ++++..+....++... ......+++...++.......    ..+-
T Consensus        20 ~MkIl~v~~~~~~~~gG~~~~~~~l~~~L~~~--G~eV~vi~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~   96 (237)
T 2gek_A           20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA--GHEVSVLAPASPHVKL-PDYVVSGGKAVPIPYNGSVARLRFGPATH   96 (237)
T ss_dssp             -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT--TCEEEEEESCCTTSCC-CTTEEECCCCC------------CCHHHH
T ss_pred             CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCCCCCC-CCCEECCCEEEECCCCCCHHHHHCCHHHH
T ss_conf             98899989986899988999999999999977--9989999418988777-63032372699815676312220358999


Q ss_pred             HHHHHHCCCCCCEEEEEEEEEEECCCHHHH-CCCCC-EEECCCCCCCCCC
Q ss_conf             432100012343036431122205721321-06654-2313532233324
Q gi|254780570|r   72 KAILMQLSSIQPDLICLAGYMRLLSRDFVE-SYKNK-ILNIHPSLLPLFP  119 (205)
Q Consensus        72 ~~l~~~l~~~~~Dliv~~g~~~il~~~~l~-~~~~~-~iN~HpslLP~yr  119 (205)
                      ..+.+.+++.++|+|.+..+..-+...++. ..+.. ++..|....+..+
T Consensus        97 ~~l~~~l~~~~~DiI~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~  146 (237)
T 2gek_A           97 RKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLT  146 (237)
T ss_dssp             HHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSHHH
T ss_pred             HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf             99999998607763688640332024667875289852144210124444


No 135
>>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.50A {Geobacter metallireducens gs-15} (A:1-177)
Probab=47.56  E-value=19  Score=16.39  Aligned_cols=30  Identities=20%  Similarity=0.270  Sum_probs=18.2

Q ss_pred             CCCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             866599997698-50189999999739998479999
Q gi|254780570|r    2 IRKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGV   36 (205)
Q Consensus         2 ~k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~V   36 (205)
                      |++||+|+.+|+ |+.+-..+-   +.  .+++..+
T Consensus         1 M~mkI~iiG~G~mG~~la~~L~---~~--g~~V~~~   31 (177)
T 3hn2_A            1 MSLRIAIVGAGALGLYYGALLQ---RS--GEDVHFL   31 (177)
T ss_dssp             ---CEEEECCSTTHHHHHHHHH---HT--SCCEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHH---HC--CCCEEEE
T ss_conf             9988999895999999999998---46--9945999


No 136
>>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus} (A:1-215)
Probab=47.49  E-value=19  Score=16.38  Aligned_cols=60  Identities=7%  Similarity=0.117  Sum_probs=32.5

Q ss_pred             CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECCCCC---------HHHHHHHHCCCCEEEEECCC
Q ss_conf             66599997698-50-1899999997399984799999768888---------78889986089504630132
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDNSNA---------QGLVKARKEKVPTFPIPYKD   63 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~~da---------~~l~~a~~~~Ip~~~i~~~~   63 (205)
                      ..|++|.+||+ .| .+..++..... +.......+..+....         .....|+..|||...++..+
T Consensus        18 ~~kv~v~~SGG~DS~v~l~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~   88 (215)
T 3a2k_A           18 GAAVIVGVSGGPDSLALLHVFLSLRD-EWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQIDV   88 (215)
T ss_dssp             SSBEEEECCSSHHHHHHHHHHHHHHH-TTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHH-HCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             39899998080999999999999889-739819999966899997669999999999998499189999874


No 137
>>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis W83} (A:1-126,A:258-289)
Probab=46.80  E-value=20  Score=16.31  Aligned_cols=38  Identities=24%  Similarity=0.218  Sum_probs=24.4

Q ss_pred             CC-CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             98-665999976985018999999973999847999997688
Q gi|254780570|r    1 MI-RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         1 M~-k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      || +.|+++.  |.|+-....+.++.... +++++.|....+
T Consensus         6 m~~~irVgII--G~G~~g~~~l~~l~~~~-~~eivav~d~~~   44 (158)
T 3bio_A            6 DDKKIRAAIV--GYGNIGRYALQALREAP-DFEIAGIVRRNP   44 (158)
T ss_dssp             --CCEEEEEE--CCSHHHHHHHHHHHHCT-TEEEEEEECC--
T ss_pred             CCCCCEEEEE--CCCHHHHHHHHHHHCCC-CCEEEEEECCCH
T ss_conf             6998569998--98899999999996499-938999989898


No 138
>>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* (A:175-354)
Probab=46.59  E-value=20  Score=16.29  Aligned_cols=97  Identities=14%  Similarity=0.106  Sum_probs=48.5

Q ss_pred             CCCHHHHHHHHHHHCCCCCCEEEEEEEC----CCCCHHHHHHHHCCCCEEEEECCCCCCCCCH-----------HHHHHH
Q ss_conf             9850189999999739998479999976----8888788899860895046301323322101-----------243210
Q gi|254780570|r   12 GEGTNMLSLIQATKKNDYPAEIVGVFSD----NSNAQGLVKARKEKVPTFPIPYKDYISRREH-----------EKAILM   76 (205)
Q Consensus        12 G~Gsnl~~Il~~~~~~~~~~eI~~Visn----~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~-----------~~~l~~   76 (205)
                      +..+.++.+.+...+-+-   . ++++.    +......++|++.|+|+..-......-.+.+           .....+
T Consensus        12 ~~~~~i~~~~~~L~~Ak~---P-vii~G~g~~~a~~~l~~lae~~~~Pv~~t~~~kg~~~~~~p~~~G~~g~~~~~~~~~   87 (180)
T 3eya_A           12 PEEEELRKLAQLLRYSSN---I-ALMCGSGCAGAHKELVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFH   87 (180)
T ss_dssp             CCHHHHHHHHHHHHTCCS---E-EEEECGGGTTCHHHHHHHHHHHTCCEEECGGGHHHHSSSCTTBCCCCSTTSCHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCC---E-EEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             248999999998640465---0-899446543048999986764148743234433234567763212233333310011


Q ss_pred             HCCCCCCEEEEEEEEEEECCCHHHHCC--CCCEEECCCCCCC
Q ss_conf             001234303643112220572132106--6542313532233
Q gi|254780570|r   77 QLSSIQPDLICLAGYMRLLSRDFVESY--KNKILNIHPSLLP  116 (205)
Q Consensus        77 ~l~~~~~Dliv~~g~~~il~~~~l~~~--~~~~iN~HpslLP  116 (205)
                      .++  +.|+|+..|..  ++......+  +.-.||..|+-+.
T Consensus        88 ~l~--~aDlil~iG~~--~~~~~~~~~~~~~i~i~~~~~~~~  125 (180)
T 3eya_A           88 TMM--NADTLVLLGTQ--FPYRAFYPTDAKIIQIDINPASIG  125 (180)
T ss_dssp             HHH--HCSEEEEESCC--CCCGGGSCSSSEEEEEESCGGGTT
T ss_pred             EEE--CCCCEEEEEEE--CCCCCCCCCCCCEEEEECCHHHHC
T ss_conf             021--24423798640--365455677671899979989947


No 139
>>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Nostoc SP} PDB: 2klb_A (A:)
Probab=46.42  E-value=20  Score=16.27  Aligned_cols=16  Identities=25%  Similarity=0.364  Sum_probs=11.5

Q ss_pred             CCCCEEEEE-ECCCCHH
Q ss_conf             986659999-7698501
Q gi|254780570|r    1 MIRKNIVIF-ISGEGTN   16 (205)
Q Consensus         1 M~k~riavl-~SG~Gsn   16 (205)
                      |..+|+.|+ +|++|+.
T Consensus         2 ~~~~kilI~Y~S~tG~T   18 (159)
T 3fni_A            2 KAETSIGVFYVSEYGYS   18 (159)
T ss_dssp             CCCCEEEEEECTTSTTH
T ss_pred             CCCCEEEEEEECCCCHH
T ss_conf             98888999999999729


No 140
>>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATP, ATPase, PP-type, PSI, protein structure initiative; 2.65A {Escherichia coli} (A:1-234)
Probab=45.83  E-value=20  Score=16.21  Aligned_cols=61  Identities=13%  Similarity=0.153  Sum_probs=35.5

Q ss_pred             CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECCC---CC-----HHHHHHHHCCCCEEEEECCC
Q ss_conf             66599997698-50-18999999973999847999997688---88-----78889986089504630132
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDNS---NA-----QGLVKARKEKVPTFPIPYKD   63 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~~---da-----~~l~~a~~~~Ip~~~i~~~~   63 (205)
                      ..|++|.+||+ .| .+..++...........+..+..+..   .+     ..-..|.+++||.+.++...
T Consensus        13 ~~kvvv~~SGG~DS~~ll~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~   83 (234)
T 1ni5_A           13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQL   83 (234)
T ss_dssp             CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf             98399998281999999999999897589981999998298895559999999999997499789999963


No 141
>>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase); archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrogenase; 2.05A {Sulfolobus solfataricus} (O:1-138,O:303-340)
Probab=45.42  E-value=21  Score=16.17  Aligned_cols=54  Identities=20%  Similarity=0.206  Sum_probs=35.1

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEC
Q ss_conf             6599997698501899999997399984799999768888788899860895046301
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPY   61 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~   61 (205)
                      .|+++.  |.|.--+.++.+..... +.+++.|.+.+++ .....+++.+++......
T Consensus         2 IrVgIi--G~G~iG~~~~~al~~~~-~~eivav~d~~~~-~~~~~a~~~~~~~~~~~~   55 (176)
T 1b7g_O            2 VNVAVN--GYGTIGKRVADAIIKQP-DMKLVGVAKTSPN-YEAFIAHRRGIRIYVPQQ   55 (176)
T ss_dssp             EEEEEE--CCSHHHHHHHHHHHTCT-TEEEEEEECSSCS-HHHHHHHHTTCCEECCGG
T ss_pred             EEEEEE--CCCHHHHHHHHHHHHCC-CCEEEEEECCCCC-HHHHHHHHCCCEEEECCC
T ss_conf             099997--58888999999997189-9789999779987-879988667998998898


No 142
>>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} (A:1-217)
Probab=45.33  E-value=21  Score=16.16  Aligned_cols=61  Identities=13%  Similarity=0.089  Sum_probs=32.3

Q ss_pred             CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEE-EEEECCCCC-------HHHHHHHHCCCCEEEEECCC
Q ss_conf             66599997698-50-1899999997399984799-999768888-------78889986089504630132
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIV-GVFSDNSNA-------QGLVKARKEKVPTFPIPYKD   63 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~-~Visn~~da-------~~l~~a~~~~Ip~~~i~~~~   63 (205)
                      +.|++|.+||+ .| .+..++...........+. ..+.+....       ...+.|+.+|||.+.++..+
T Consensus        24 ~~~vvv~~SGG~DS~~~l~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~   94 (217)
T 1wy5_A           24 ERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKEDV   94 (217)
T ss_dssp             CCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCEEEEECCH
T ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf             69699998081999999999999998779982999997289996559999999999997220001212211


No 143
>>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} (A:223-374)
Probab=44.76  E-value=21  Score=16.11  Aligned_cols=39  Identities=13%  Similarity=0.303  Sum_probs=27.8

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             665999976985-018999999973999847999997688
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      .+++++++.|.| +-+.++++..........+.++++.+.
T Consensus         5 ~~~ivliagG~GitP~~s~l~~~~~~~~~~~~~l~~~~~~   44 (152)
T 1ddg_A            5 ETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPH   44 (152)
T ss_dssp             TSCEEEECCGGGGHHHHHHHHHHHHHTCCSCEEEEEEESC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             6657999368672379999999997168984899973486


No 144
>>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} (A:254-396)
Probab=44.32  E-value=21  Score=16.06  Aligned_cols=39  Identities=18%  Similarity=0.320  Sum_probs=29.4

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             665999976985-018999999973999847999997688
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      .+++++++.|.| +-+.++++...+.+.+.++.++.+.+.
T Consensus         6 ~~~iiliAgGtGIaP~~s~l~~~~~~~~~~~i~l~~~~r~   45 (143)
T 1gvh_A            6 DTPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAEN   45 (143)
T ss_dssp             TCCEEEEEEGGGGHHHHHHHHHHHHHTCCSCEEEEEEESC
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCCC
T ss_conf             8748999678866706899999987303443043024578


No 145
>>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} (A:1-176,A:286-480)
Probab=44.15  E-value=21  Score=16.04  Aligned_cols=39  Identities=15%  Similarity=-0.009  Sum_probs=22.5

Q ss_pred             CCCCEEEEEECCC-CHHHHHHHHHHHC-CCCCCEEEEEEEC
Q ss_conf             9866599997698-5018999999973-9998479999976
Q gi|254780570|r    1 MIRKNIVIFISGE-GTNMLSLIQATKK-NDYPAEIVGVFSD   39 (205)
Q Consensus         1 M~k~riavl~SG~-Gsnl~~Il~~~~~-~~~~~eI~~Visn   39 (205)
                      |.++||+|++.|+ |+.+..++..... .....+|+++=.|
T Consensus         1 Mk~~KI~IIGaGsvG~~la~~la~~~~~~~~~~eV~l~Did   41 (371)
T 1obb_A            1 MPSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDID   41 (371)
T ss_dssp             -CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf             99766999998732316999999984657899989998698


No 146
>>3b3f_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, catalytic domain, alternative splicing, chromatin regulator; HET: SAH; 2.20A {Rattus norvegicus} PDB: 3b3g_A 2v74_B* 2v7e_A (A:1-149)
Probab=44.12  E-value=21  Score=16.04  Aligned_cols=93  Identities=19%  Similarity=0.116  Sum_probs=47.8

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC-HHHHHHHHCCCCEEEE-ECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             6599997698501899999997399984799999768888-7888998608950463-0132332210124321000123
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNA-QGLVKARKEKVPTFPI-PYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da-~~l~~a~~~~Ip~~~i-~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      .++.=+++|+|..+..+.+.      ..++.+|--+..-. ...++++..++...+. -..+          ........
T Consensus        48 ~~vLdiGcG~G~~~~~la~~------~~~v~~~D~s~~~~~~a~~~~~~~~~~~~v~~~~~~----------~~~~~~~~  111 (149)
T 3b3f_A           48 KIVLDVGCGSGILSFFAAQA------GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGK----------VEEVSLPE  111 (149)
T ss_dssp             CEEEEESCTTSHHHHHHHHT------TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESC----------TTTCCCSS
T ss_pred             CEEEEECCCCCHHHHHHHHC------CCCEEEEEECHHHHHHHHHHHHHCCCCCCEEEEEEE----------CCCCCCCC
T ss_conf             98999548756999999976------998899992989999999999986999724899976----------32123466


Q ss_pred             CCEEEEEEEEEEECCC-HHHHCCCCCEEECCCCCCC
Q ss_conf             4303643112220572-1321066542313532233
Q gi|254780570|r   82 QPDLICLAGYMRLLSR-DFVESYKNKILNIHPSLLP  116 (205)
Q Consensus        82 ~~Dliv~~g~~~il~~-~~l~~~~~~~iN~HpslLP  116 (205)
                      +.|+|++.+-+..++. +....+    -++|..|=|
T Consensus       112 ~fD~I~~~~~l~~~~~~~~~~~l----~~~~~~Lkp  143 (149)
T 3b3f_A          112 QVDIIISEPMGYMLFNERMLESY----LHAKKYLKP  143 (149)
T ss_dssp             CEEEEECCCCBTTBTTTSHHHHH----HHGGGGEEE
T ss_pred             CCCEEEEECHHHHCCCCHHHHHH----HHHHHHCCC
T ss_conf             64479973003222440157899----999862699


No 147
>>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 2g6a_A* 2g65_A* 2g6c_A* 2g68_A* (A:188-324)
Probab=43.67  E-value=11  Score=17.92  Aligned_cols=99  Identities=8%  Similarity=0.006  Sum_probs=47.5

Q ss_pred             CEEEEEECC-CCHHHHHHHHHHHCCCCCCEEEEEEEC---CCCCHHH----HHHHHCCCCEEEEECCCCCCCCCHHHHHH
Q ss_conf             659999769-850189999999739998479999976---8888788----89986089504630132332210124321
Q gi|254780570|r    4 KNIVIFISG-EGTNMLSLIQATKKNDYPAEIVGVFSD---NSNAQGL----VKARKEKVPTFPIPYKDYISRREHEKAIL   75 (205)
Q Consensus         4 ~riavl~SG-~Gsnl~~Il~~~~~~~~~~eI~~Visn---~~da~~l----~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~   75 (205)
                      .++++.+-+ +|..+.+++.....  ++.++..+.+-   .|+...+    +.+++.|..+...+.            +.
T Consensus         8 l~ia~vGD~~~~rv~~Sl~~~~~~--~g~~~~~~~pp~~~~p~~~~~~~a~~~~~~~g~~i~~~~d------------~~   73 (137)
T 1zq6_A            8 LTWTYHPKPLNTAVANSALTIATR--MGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHD------------ID   73 (137)
T ss_dssp             EEECCCSSCCCSHHHHHHHHHHHH--TTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECC------------HH
T ss_pred             EEEECCCCCCCCHHHHHHHHHHHH--HCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECC------------HH
T ss_conf             985104774333899888898774--1562478447623577889999887777761576189717------------77


Q ss_pred             HHCCCCCCEEEEEEEE--EE------------------ECCCHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf             0001234303643112--22------------------0572132106654231353223332444
Q gi|254780570|r   76 MQLSSIQPDLICLAGY--MR------------------LLSRDFVESYKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        76 ~~l~~~~~Dliv~~g~--~~------------------il~~~~l~~~~~~~iN~HpslLP~yrG~  121 (205)
                      +.++  +.|+|..-.|  ++                  .+..++++.-+. ++=+||  ||.+||.
T Consensus        74 eav~--~aDviy~~~wq~~~~~~~~~~~~~~~~~~~~y~v~~~~l~~~~d-~~~mH~--LP~~Rg~  134 (137)
T 1zq6_A           74 SAYA--GADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTNN-GVFSHC--LPLRRNV  134 (137)
T ss_dssp             HHHT--TCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTSSS-CEEECC--SCCCBTT
T ss_pred             HHHC--CCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCCC-CEEECC--CCCCCCC
T ss_conf             8724--87799964067532143113569999987635837999636899-899899--9999988


No 148
>>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A* (A:1-93,A:210-255)
Probab=43.46  E-value=22  Score=15.97  Aligned_cols=67  Identities=21%  Similarity=0.244  Sum_probs=34.8

Q ss_pred             CEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             65999976985--0189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    4 KNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         4 ~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      ++|+||=||-|  |-++.|.+.    ....++.. +.|+..++       +|-...       ..-..+-.++.+.+.+.
T Consensus         1 mpIGVFDSGiGGLTVlk~i~k~----lP~~~~IY-~aD~a~~P-------YG~Ks~-------eeI~~~~~~iv~~L~~~   61 (139)
T 2jfz_A            1 MKIGVFDSGVGGFSVLKSLLKA----RLFDEIIY-YGDSARVP-------YGTKDP-------TTIKQFGLEALDFFKPH   61 (139)
T ss_dssp             CEEEEEESSSTTHHHHHHHHHT----TCCSEEEE-EECTTTCC-------CTTSCH-------HHHHHHHHHHHHHHGGG
T ss_pred             CEEEEEECCCCHHHHHHHHHHH----CCCCCEEE-EECCCCCC-------CCCCCH-------HHHHHHHHHHHHHHHHC
T ss_conf             9799994897679999999997----89999899-95378899-------899999-------99999999999987633


Q ss_pred             CCEEEEEE
Q ss_conf             43036431
Q gi|254780570|r   82 QPDLICLA   89 (205)
Q Consensus        82 ~~Dliv~~   89 (205)
                      +++++|.|
T Consensus        62 ~vk~IVIA   69 (139)
T 2jfz_A           62 EIELLIVA   69 (139)
T ss_dssp             CCSCEEEC
T ss_pred             CCCEEEEE
T ss_conf             65678870


No 149
>>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis} (A:1-99,A:212-276)
Probab=43.38  E-value=22  Score=15.96  Aligned_cols=68  Identities=19%  Similarity=0.192  Sum_probs=37.1

Q ss_pred             CCEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             665999976985--018999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    3 RKNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         3 k~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      +..|+||=||-|  |-+++|.+..    ...++.. +-|+.           +.|+=.   +....-..+-.++.+.+.+
T Consensus         7 ~~~IgifDSG~GGltv~~~i~~~l----P~~~~iY-~~D~~-----------~~PYG~---k~~~~i~~~~~~~~~~l~~   67 (164)
T 2dwu_A            7 HSVIGVLDSGVGGLTVASEIIRQL----PKESICY-IGDNE-----------RCPYGP---RSVEEVQSFVFEMVEFLKQ   67 (164)
T ss_dssp             CCEEEEEESSSTTHHHHHHHHHHC----TTSCEEE-EECGG-----------GCCCTT---SCHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHC----CCCCEEE-EECCC-----------CCCCCC---CCHHHHHHHHHHHHHHHHH
T ss_conf             990899948963899999999978----9998899-95278-----------899888---9999999999999999862


Q ss_pred             CCCEEEEEE
Q ss_conf             343036431
Q gi|254780570|r   81 IQPDLICLA   89 (205)
Q Consensus        81 ~~~Dliv~~   89 (205)
                      .+++++|.|
T Consensus        68 ~~~~~iViA   76 (164)
T 2dwu_A           68 FPLKALVVA   76 (164)
T ss_dssp             SCEEEEEEC
T ss_pred             CCCCEEEEE
T ss_conf             577689995


No 150
>>3hl0_A Maleylacetate reductase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str} (A:1-159)
Probab=43.28  E-value=22  Score=15.95  Aligned_cols=83  Identities=13%  Similarity=0.073  Sum_probs=42.8

Q ss_pred             CCEEEEEECCCCH--HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHH----HHHCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf             6659999769850--189999999739998479999976888878889----9860895046301323322101243210
Q gi|254780570|r    3 RKNIVIFISGEGT--NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVK----ARKEKVPTFPIPYKDYISRREHEKAILM   76 (205)
Q Consensus         3 k~riavl~SG~Gs--nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~----a~~~~Ip~~~i~~~~~~~~~~~~~~l~~   76 (205)
                      ..++ +|  |.|.  .+-.+++..     +.+=++|+|+..-....++    .++.++..+  +........+.-.++.+
T Consensus        12 p~~i-~~--g~g~~~~l~~~l~~~-----g~~~~livtd~~~~~~~~~v~~~l~~~~~~~~--~~~~~~~~~~~v~~~~~   81 (159)
T 3hl0_A           12 PARI-VF--SAGSSADVAEEIRRL-----GLSRALVLSTPQQKGDAEALASRLGRLAAGVF--SEAAXHTPVEVTKTAVE   81 (159)
T ss_dssp             CCCE-EE--CTTGGGGHHHHHHHT-----TCCCEEEECCGGGHHHHHHHHHHHGGGEEEEE--CCCCTTCBHHHHHHHHH
T ss_pred             CCEE-EE--CCCHHHHHHHHHHHC-----CCCEEEEEECCCCCCHHHHHHHHHHCCCCEEE--ECCCCCCCHHHHHHHHH
T ss_conf             8228-98--969999999999973-----99869999784221479999998606882899--62616999899999999


Q ss_pred             HCCCCCCEEEEEEEEEEEC
Q ss_conf             0012343036431122205
Q gi|254780570|r   77 QLSSIQPDLICLAGYMRLL   95 (205)
Q Consensus        77 ~l~~~~~Dliv~~g~~~il   95 (205)
                      ..++.++|.|+..|=+.++
T Consensus        82 ~~~~~~~d~iiaiGGGsvi  100 (159)
T 3hl0_A           82 AYRAAGADCVVSLGGGSTT  100 (159)
T ss_dssp             HHHHTTCSEEEEEESHHHH
T ss_pred             HHHHCCCCEEEEECCCCCH
T ss_conf             9996399889995897511


No 151
>>1vkf_A Glycerol uptake operon antiterminator-related protein; TM1436, structural genomics, JCSG, PSI, protein structure initiative; HET: CIT; 1.65A {Thermotoga maritima MSB8} (A:)
Probab=43.20  E-value=22  Score=15.95  Aligned_cols=93  Identities=15%  Similarity=0.296  Sum_probs=47.5

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCC-----------------------CEEEEEEECCCCCHHHHHHHHCCCCEEEEE
Q ss_conf             659999769850189999999739998-----------------------479999976888878889986089504630
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYP-----------------------AEIVGVFSDNSNAQGLVKARKEKVPTFPIP   60 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~-----------------------~eI~~Visn~~da~~l~~a~~~~Ip~~~i~   60 (205)
                      -++++|-.|.=.++..+++.+++..-.                       +.+.++||-+  +..+.+|++.|+.+..  
T Consensus        32 ~~~ifll~g~I~~L~~~v~~lk~~gK~vfVHiDli~GL~~D~~ai~fLk~~~~dGIISTk--~~~i~~Ak~~gl~tIq--  107 (188)
T 1vkf_A           32 PDVVFLLKSDILNLKFHLKILKDRGKTVFVDXDFVNGLGEGEEAILFVKKAGADGIITIK--PKNYVVAKKNGIPAVL--  107 (188)
T ss_dssp             SSEEEECCEETTTHHHHHHHHHHTTCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEESC--HHHHHHHHHTTCCEEE--
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEECC--HHHHHHHHHCCCEEEE--
T ss_conf             999999568488899999999986998999865167778887999999975999999788--9999999977992898--


Q ss_pred             CCCC-CCCCCHHHHHHHHCCCCCCEEE-EEEEEEEECCCHHHHCCCC
Q ss_conf             1323-3221012432100012343036-4311222057213210665
Q gi|254780570|r   61 YKDY-ISRREHEKAILMQLSSIQPDLI-CLAGYMRLLSRDFVESYKN  105 (205)
Q Consensus        61 ~~~~-~~~~~~~~~l~~~l~~~~~Dli-v~~g~~~il~~~~l~~~~~  105 (205)
                       +-| .+...++. -.+.+++.+||.| ++=|   ++++.+++....
T Consensus       108 -RiFliDS~al~~-~~~~i~~~~PD~IEilPG---~~~~~ii~~~~~  149 (188)
T 1vkf_A          108 -RFFALDSKAVER-GIEQIETLGVDVVEVLPG---AVAPKVARKIPG  149 (188)
T ss_dssp             -EEECCSHHHHHH-HHHHHHHHTCSEEEEESG---GGHHHHHTTSTT
T ss_pred             -EEEEEEHHHHHH-HHHHHHHCCCCEEEECCH---HHHHHHHHHCCC
T ss_conf             -765452778999-999985369999998653---417999986259


No 152
>>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} (A:1-188)
Probab=43.16  E-value=22  Score=15.94  Aligned_cols=81  Identities=7%  Similarity=-0.111  Sum_probs=47.7

Q ss_pred             CCCHHHHHHHHHHHCCCCCCEEEEEEECCCC--C----HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEE
Q ss_conf             9850189999999739998479999976888--8----788899860895046301323322101243210001234303
Q gi|254780570|r   12 GEGTNMLSLIQATKKNDYPAEIVGVFSDNSN--A----QGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDL   85 (205)
Q Consensus        12 G~Gsnl~~Il~~~~~~~~~~eI~~Visn~~d--a----~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dl   85 (205)
                      |.|. +..+-+.+.  +++..-++|++++.-  .    ...+..++.++++..+..-......+.-.++.+..++.++|.
T Consensus        25 G~g~-l~~l~~~l~--~~g~~~vlivt~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~t~~~v~~~~~~~~~~~~d~  101 (188)
T 1o2d_A           25 GEKI-LEKRGNIID--LLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVXKAVERYRNDSFDF  101 (188)
T ss_dssp             STTH-HHHHGGGGG--GTCSEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSE
T ss_pred             ECCH-HHHHHHHHH--HCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCE
T ss_conf             0799-999999999--7699589997686888745999999999876985999688678979999999999998539988


Q ss_pred             EEEEEEEEEC
Q ss_conf             6431122205
Q gi|254780570|r   86 ICLAGYMRLL   95 (205)
Q Consensus        86 iv~~g~~~il   95 (205)
                      |+..|=+..+
T Consensus       102 IiaiGGGs~i  111 (188)
T 1o2d_A          102 VVGLGGGSPX  111 (188)
T ss_dssp             EEEEESHHHH
T ss_pred             EEEECCCCCC
T ss_conf             9992898612


No 153
>>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone, THDP, metal, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* (A:344-556)
Probab=43.12  E-value=22  Score=15.94  Aligned_cols=10  Identities=20%  Similarity=0.275  Sum_probs=4.3

Q ss_pred             EEECCCCCCH
Q ss_conf             9871899899
Q gi|254780570|r  156 AVPVSSQDTE  165 (205)
Q Consensus       156 ~~~i~~~d~~  165 (205)
                      .+.+++.+..
T Consensus       191 ev~~~~~~~~  200 (213)
T 3hww_A          191 EMVVNDTDGA  200 (213)
T ss_dssp             EEECCSSHHH
T ss_pred             EEECCCHHHH
T ss_conf             9984807779


No 154
>>2zhx_A UDG, uracil-DNA glycosylase; DNA repair, UNG-UGI complex, UNG-DNA interactions, cytoplasm, DNA damage; 3.10A {Mycobacterium tuberculosis} (A:)
Probab=43.11  E-value=11  Score=17.95  Aligned_cols=53  Identities=17%  Similarity=0.231  Sum_probs=32.1

Q ss_pred             CCHHHHHHHHCCCCCCEEEEEEEEEEECC--CHHHHCCCCCEE-ECCCCCCCCCCCC
Q ss_conf             10124321000123430364311222057--213210665423-1353223332444
Q gi|254780570|r   68 REHEKAILMQLSSIQPDLICLAGYMRLLS--RDFVESYKNKIL-NIHPSLLPLFPGL  121 (205)
Q Consensus        68 ~~~~~~l~~~l~~~~~Dliv~~g~~~il~--~~~l~~~~~~~i-N~HpslLP~yrG~  121 (205)
                      +.|.+.+++.|.+.+.++|++. |+..-.  ..+++.-+.-++ -.|||.|-.+||.
T Consensus       157 e~ft~~ii~~l~~~~~~iVf~L-wG~~A~~~~~~i~~~~~~vl~s~HPSpls~~~~F  212 (238)
T 2zhx_A          157 EAVTECAIRALAARAAPLVAIL-WGRDASTLKPMLAAGNCVAIESPHPSPLSASRGF  212 (238)
T ss_dssp             HHHHHHHHHHHHHSSSCEEEEE-ESHHHHTTTTTSCSSSEEEEEECCSSTTTGGGTT
T ss_pred             HHHHHHHHHHHHHCCCCCEEEE-EECHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC
T ss_conf             9999999999982057828999-8343444330246778669974899950225799


No 155
>>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} (A:1-93,A:213-254)
Probab=42.99  E-value=22  Score=15.92  Aligned_cols=67  Identities=21%  Similarity=0.142  Sum_probs=36.3

Q ss_pred             CEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             65999976985--0189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    4 KNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         4 ~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      .+|++|=||=|  |-++++.+..    .+.++.. +.|+..++       +|-+.       ...-.++-.++.+.+.+.
T Consensus         1 mpIgiFDSGiGGLTVlk~l~~~l----P~~~~iY-~aD~a~~P-------YG~Ks-------~eeI~~~~~~i~~~L~~~   61 (135)
T 1b73_A            1 MKIGIFDSGVGGLTVLKAIRNRY----RKVDIVY-LGDTARVP-------YGIRS-------KDTIIRYSLECAGFLKDK   61 (135)
T ss_dssp             CEEEEEESSSGGGTHHHHHHHHS----TTCEEEE-EECTTTCC-------CTTSC-------HHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEECCCCHHHHHHHHHHHC----CCCCEEE-EECCCCCC-------CCCCC-------HHHHHHHHHHHHHHHHHC
T ss_conf             97999958976799999999978----9998899-93379999-------98899-------999999999999999865


Q ss_pred             CCEEEEEE
Q ss_conf             43036431
Q gi|254780570|r   82 QPDLICLA   89 (205)
Q Consensus        82 ~~Dliv~~   89 (205)
                      +++++|.|
T Consensus        62 ~vk~IVIA   69 (135)
T 1b73_A           62 GVDIIVVA   69 (135)
T ss_dssp             TCSEEEEC
T ss_pred             CCCEEEEE
T ss_conf             99899994


No 156
>>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum} (A:123-258,A:339-364)
Probab=42.95  E-value=22  Score=15.92  Aligned_cols=73  Identities=8%  Similarity=-0.003  Sum_probs=41.1

Q ss_pred             HHHHHHHHHCCCCCCEEEEEEECCCCCH-----HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEE
Q ss_conf             8999999973999847999997688887-----88899860895046301323322101243210001234303643112
Q gi|254780570|r   17 MLSLIQATKKNDYPAEIVGVFSDNSNAQ-----GLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLICLAGY   91 (205)
Q Consensus        17 l~~Il~~~~~~~~~~eI~~Visn~~da~-----~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv~~g~   91 (205)
                      .+++.+..+....+ .|..+..|.+-..     ..+.+++.|+.......-. .+..++. .++..+++.+||.|+++++
T Consensus         7 ~~ala~~l~~~g~~-~Vaii~~d~~~G~~~~~~~~~~~~~~G~~vv~~~~~~-~~~~d~~-~~v~~i~~~~pdvIv~~~~   83 (162)
T 3lop_A            7 IDKXITALVTIGVT-RIGVLYQEDALGKEAITGVERTLKAHALAITAXASYP-RNTANVG-PAVDKLLAADVQAIFLGAT   83 (162)
T ss_dssp             HHHHHHHHHHTTCC-CEEEEEETTHHHHHHHHHHHHHHHTTTCCCSEEEEEC-TTSCCCH-HHHHHHHHSCCSEEEEESC
T ss_pred             HHHHHHHHHHCCCC-EEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEEC-CCCCCHH-HHHHHHHHCCCCEEEEECC
T ss_conf             99999999981998-8999983683269999999999997698899999837-9885368-9999998579899999687


Q ss_pred             E
Q ss_conf             2
Q gi|254780570|r   92 M   92 (205)
Q Consensus        92 ~   92 (205)
                      .
T Consensus        84 ~   84 (162)
T 3lop_A           84 A   84 (162)
T ss_dssp             H
T ss_pred             H
T ss_conf             8


No 157
>>3pfk_A Phosphofructokinase; transferase(phosphotransferase); 2.40A {Bacillus stearothermophilus} (A:1-131,A:251-305)
Probab=42.61  E-value=23  Score=15.89  Aligned_cols=103  Identities=16%  Similarity=0.193  Sum_probs=51.4

Q ss_pred             CEEEEEECCCCH-HHH----HHHHHHHCCCCCCEEEEEEECCCCCHHH--------HHHHHCCC-----CE-EEEECCCC
Q ss_conf             659999769850-189----9999997399984799999768888788--------89986089-----50-46301323
Q gi|254780570|r    4 KNIVIFISGEGT-NML----SLIQATKKNDYPAEIVGVFSDNSNAQGL--------VKARKEKV-----PT-FPIPYKDY   64 (205)
Q Consensus         4 ~riavl~SG~Gs-nl~----~Il~~~~~~~~~~eI~~Visn~~da~~l--------~~a~~~~I-----p~-~~i~~~~~   64 (205)
                      |||+|+.||..+ .+.    ++++.....  ..+|.++.   ..-.||        ....-.++     .. ..-..+.+
T Consensus         2 KrI~IltsGGdaPGlNa~Ir~vv~~a~~~--g~ev~G~~---~G~~GL~~~~~~~l~~~~v~~i~~~GGt~LgtsR~~~~   76 (186)
T 3pfk_A            2 KRIGVLTSGGDSPGMNAAIRSVVRKAIYH--GVEVYGVY---HGYAGLIAGNIKKLEVGDVGDIIHRGGTILYTARCPEF   76 (186)
T ss_dssp             CEEEEEEESSCCTTHHHHHHHHHHHHHHT--TCEEEEES---SHHHHHHTTCEEEECGGGGTTCTTCCSCTTCCCCCGGG
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEC---CCHHHHCCCCCCCCCHHHHHHHHHCCCCHHCCCCCCCC
T ss_conf             88999876887689999999999999977--99999984---15687567995159989998798648511045888865


Q ss_pred             CCCCCHHHHHHHHCCCCCCEEEE-EEEEEEECCCHHHHCCCCCEEECCC
Q ss_conf             32210124321000123430364-3112220572132106654231353
Q gi|254780570|r   65 ISRREHEKAILMQLSSIQPDLIC-LAGYMRLLSRDFVESYKNKILNIHP  112 (205)
Q Consensus        65 ~~~~~~~~~l~~~l~~~~~Dliv-~~g~~~il~~~~l~~~~~~~iN~Hp  112 (205)
                      .++ +.-+++.+.+++++.|.++ .-|-...-....+..+...++.+=-
T Consensus        77 ~~~-~~~~~~~~~l~~~~Id~LivIGGdgS~~~a~~L~e~gi~vigiPk  124 (186)
T 3pfk_A           77 KTE-EGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEHGFPCVGVPG  124 (186)
T ss_dssp             SSH-HHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEB
T ss_pred             CCC-HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf             431-015579999998367659994584799999998733675553111


No 158
>>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus} (A:)
Probab=42.33  E-value=23  Score=15.86  Aligned_cols=34  Identities=21%  Similarity=0.268  Sum_probs=24.1

Q ss_pred             CEEEEEECCCCHHHH--HHHHHHHCCCCCCEEEEEEEC
Q ss_conf             659999769850189--999999739998479999976
Q gi|254780570|r    4 KNIVIFISGEGTNML--SLIQATKKNDYPAEIVGVFSD   39 (205)
Q Consensus         4 ~riavl~SG~Gsnl~--~Il~~~~~~~~~~eI~~Visn   39 (205)
                      |||++.+||+....+  .+++..+..  ++++.+|+|.
T Consensus         2 K~ili~vtGs~~~~~~~~li~~L~~~--g~~v~vv~s~   37 (189)
T 2ejb_A            2 QKIALCITGASGVIYGIKLLQVLEEL--DFSVDLVISR   37 (189)
T ss_dssp             CEEEEEECSSTTHHHHHHHHHHHHHT--TCEEEEEECH
T ss_pred             CEEEEEECCHHHHHHHHHHHHHHHHC--CCEEEEEECC
T ss_conf             88999973189999999999999977--9979999666


No 159
>>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus bulgaricus, transferase; 1.85A {Lactobacillus delbrueckii subsp} (A:1-131,A:253-303)
Probab=42.16  E-value=23  Score=15.84  Aligned_cols=101  Identities=17%  Similarity=0.179  Sum_probs=49.3

Q ss_pred             CEEEEEECCCCH-H----HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHH-------------HC-CCCEEEEECCCC
Q ss_conf             659999769850-1----8999999973999847999997688887888998-------------60-895046301323
Q gi|254780570|r    4 KNIVIFISGEGT-N----MLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKAR-------------KE-KVPTFPIPYKDY   64 (205)
Q Consensus         4 ~riavl~SG~Gs-n----l~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~-------------~~-~Ip~~~i~~~~~   64 (205)
                      |||+||.||..+ .    +.++++.....  ..+|.++.   ..-.++-..+             .. |-....-....+
T Consensus         2 krI~IltsGGdaPGlNa~Ir~vv~~a~~~--g~~v~G~~---~G~~GL~~~~~~~l~~~~v~~i~~~GGtiLgtsR~~~~   76 (182)
T 1zxx_A            2 KRIGILTSGGDAPGMNAAVRAVTRVAIAN--GLEVFGIR---YGFAGLVAGDIFPLESEDVAHLINVSGTFLYSARYPEF   76 (182)
T ss_dssp             CEEEEEECSSCCTTHHHHHHHHHHHHHTT--TCEEEEEC---THHHHHHHTCEEECCGGGGTTCTTCCSCTTCCCCCGGG
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEC---CCHHHHCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             88999885787377999999999999978--99899987---30687468991779999987677337740135777755


Q ss_pred             CCCCCHHHHHHHHCCCCCCEEEEEE-EEEEECCCHHHHCCCCCEEEC
Q ss_conf             3221012432100012343036431-122205721321066542313
Q gi|254780570|r   65 ISRREHEKAILMQLSSIQPDLICLA-GYMRLLSRDFVESYKNKILNI  110 (205)
Q Consensus        65 ~~~~~~~~~l~~~l~~~~~Dliv~~-g~~~il~~~~l~~~~~~~iN~  110 (205)
                      .+++. -+++.+.+++++.|-+++. |-...=....+..+...+|.+
T Consensus        77 ~~~~~-~~~~~~~l~~~~Id~LivIGGdGS~~~a~~L~~~gi~vIgI  122 (182)
T 1zxx_A           77 AEEEG-QLAGIEQLKKHGIDAVVVIGGDGSYHGALQLTRHGFNSIGL  122 (182)
T ss_dssp             TSHHH-HHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCHHH-HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCE
T ss_conf             55566-77788899870788899967972799999875424664430


No 160
>>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343} (A:1-126)
Probab=42.06  E-value=23  Score=15.83  Aligned_cols=68  Identities=13%  Similarity=0.063  Sum_probs=32.0

Q ss_pred             CCCCEEEEEECCC-CHH-HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             9866599997698-501-89999999739998479999976888878889986089504630132332210124321000
Q gi|254780570|r    1 MIRKNIVIFISGE-GTN-MLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL   78 (205)
Q Consensus         1 M~k~riavl~SG~-Gsn-l~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l   78 (205)
                      |.+.|+++.+.|+ |+. +..++.   .. -+.+++.|++.+++ .    ++...-.....     .+       +-+.+
T Consensus         3 ~~~~rv~iiG~G~~g~~~~~~~~~---~~-~~~~iv~v~d~~~~-~----~~~~~~~~~~~-----~~-------~~~l~   61 (126)
T 3fhl_A            3 LEIIKTGLAAFGMSGQVFHAPFIS---TN-PHFELYKIVERSKE-L----SKERYPQASIV-----RS-------FKELT   61 (126)
T ss_dssp             CCCEEEEESCCSHHHHHTTHHHHH---HC-TTEEEEEEECSSCC-G----GGTTCTTSEEE-----SC-------SHHHH
T ss_pred             CCCEEEEEECCCHHHHHHHHHHHH---HC-CCCEEEEEECCCHH-H----HHHHCCCCCCC-----CC-------HHHHH
T ss_conf             667389999278999999999998---49-79389999829999-9----99867899842-----89-------99996


Q ss_pred             CCCCCEEEEEE
Q ss_conf             12343036431
Q gi|254780570|r   79 SSIQPDLICLA   89 (205)
Q Consensus        79 ~~~~~Dliv~~   89 (205)
                      ...++|+++.+
T Consensus        62 ~~~~~d~v~i~   72 (126)
T 3fhl_A           62 EDPEIDLIVVN   72 (126)
T ss_dssp             TCTTCCEEEEC
T ss_pred             CCCCCCEEEEC
T ss_conf             59999889991


No 161
>>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphatase, transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli K12} (A:205-404)
Probab=41.90  E-value=23  Score=15.81  Aligned_cols=57  Identities=12%  Similarity=0.139  Sum_probs=32.4

Q ss_pred             CCCEEEEEECCC-CHHHH-HHHHHHHCCCCCCEEEEEEEC---CCCCH----HHHHHHHCCCCEEEEECC
Q ss_conf             866599997698-50189-999999739998479999976---88887----888998608950463013
Q gi|254780570|r    2 IRKNIVIFISGE-GTNML-SLIQATKKNDYPAEIVGVFSD---NSNAQ----GLVKARKEKVPTFPIPYK   62 (205)
Q Consensus         2 ~k~riavl~SG~-Gsnl~-~Il~~~~~~~~~~eI~~Visn---~~da~----~l~~a~~~~Ip~~~i~~~   62 (205)
                      .++|+++.+||+ .|.+- .++...    .+.++..+..+   .+...    .-+.|++.+++.+.++..
T Consensus        22 ~~~kvvv~~SGG~DS~~~l~ll~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   87 (200)
T 1gpm_A           22 GDDKVILGLSGGVDSSVTAMLLHRA----IGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAE   87 (200)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHH----HGGGEEEEEEECSCSCTTHHHHHHHHHTTTTCCCEEEEECH
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHH----HCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECC
T ss_conf             8844888405785249999999876----05417999935776447877999999976058845999452


No 162
>>1m1n_B Nitrogenase molybdenum-iron protein beta chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} (B:33-63,B:339-522)
Probab=41.86  E-value=23  Score=15.81  Aligned_cols=81  Identities=15%  Similarity=0.139  Sum_probs=46.1

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHH----HHHH--CCCCEEEEECCCCCCCCCHHHHHHHH
Q ss_conf             65999976985018999999973999847999997688887888----9986--08950463013233221012432100
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLV----KARK--EKVPTFPIPYKDYISRREHEKAILMQ   77 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~----~a~~--~~Ip~~~i~~~~~~~~~~~~~~l~~~   77 (205)
                      ||++|.  |.++-+-.+.+...  ++..+++++++...+...-+    ..++  .+....++...+       ..++.+.
T Consensus        57 Krv~I~--gd~~~~~~la~fL~--ElGm~vv~~~~~~~~~~~~e~~~~~l~~~~~~~~~~v~~~~d-------~~e~~~~  125 (215)
T 1m1n_B           57 KRFALW--GDPDFVMGLVKFLL--ELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKD-------LWHLRSL  125 (215)
T ss_dssp             CEEEEE--CCHHHHHHHHHHHH--HTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCC-------HHHHHHH
T ss_pred             CEEEEE--CCCHHHHHHHHHHH--HCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCC-------HHHHHHH
T ss_conf             879998--88289999999999--869973499945899789999999985255687877996899-------9999999


Q ss_pred             CCCCCCEEEEEEEEEEEC
Q ss_conf             012343036431122205
Q gi|254780570|r   78 LSSIQPDLICLAGYMRLL   95 (205)
Q Consensus        78 l~~~~~Dliv~~g~~~il   95 (205)
                      +++.+|||++...|.+.+
T Consensus       126 i~~~~pDLiig~s~ek~~  143 (215)
T 1m1n_B          126 VFTDKPDFMIGNSYGKFI  143 (215)
T ss_dssp             HHHSCCSEEEECTTHHHH
T ss_pred             HHHCCCCEEEECCCCHHH
T ss_conf             862799999978853001


No 163
>>4ubp_C Protein (urease (chain C)); nickel, acetohydroxamic acid, metalloenzyme; HET: KCX; 1.55A {Bacillus pasteurii} (C:133-426,C:486-570)
Probab=41.25  E-value=24  Score=15.75  Aligned_cols=89  Identities=17%  Similarity=0.249  Sum_probs=56.9

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC--------HHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf             66599997698501899999997399984799999768888--------7888998608950463013233221012432
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNA--------QGLVKARKEKVPTFPIPYKDYISRREHEKAI   74 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da--------~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l   74 (205)
                      ..++.+|+-|++|+..+|.+....+-...++      ++|-        ..|.-|+++.+++-+.  .|..+...|-+..
T Consensus        59 P~N~g~~gKGn~s~~~~l~eqi~AGA~GlKi------HEDwGaTpa~Id~~L~vad~~dvqvaiH--tDtLNE~GfvEdT  130 (379)
T 4ubp_C           59 PINVGILGKGHGSSIAPIMEQIDAGAAGLXI------HEDWGATPASIDRSLTVADEADVQVAIH--SDTLNEAGFLEDT  130 (379)
T ss_dssp             SSEEEEEEECCCSSHHHHHHHHHHTCCEEEE------EGGGCCCHHHHHHHHHHHHHHTCEEEEE--CCTTCSSCCHHHH
T ss_pred             CEEEEEECCCCCCCHHHHHHHHHCCCCCCCC------CCCCCCCHHHHHHHHHHHHHCCCCEEEE--HHHHHHHHHHHHH
T ss_conf             5355431243567524556654303333211------2454332245544556665315300220--3356679998744


Q ss_pred             HHHCC--------------CCCCEEEEEEEEEEECCCHH
Q ss_conf             10001--------------23430364311222057213
Q gi|254780570|r   75 LMQLS--------------SIQPDLICLAGYMRLLSRDF   99 (205)
Q Consensus        75 ~~~l~--------------~~~~Dliv~~g~~~il~~~~   99 (205)
                      +..+.              .+.||++..+|+..+||.+-
T Consensus       131 ~~a~~gRtiHt~HtEGAGGGHAPDii~v~g~~NVLPsST  169 (379)
T 4ubp_C          131 LRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVLPSST  169 (379)
T ss_dssp             HHHHTTCCEEETTTTSTTSSSTTTGGGGGGSTTEEEBCC
T ss_pred             HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             444248754531002455555799999838761467886


No 164
>>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A* (A:1-97,A:210-269)
Probab=40.75  E-value=24  Score=15.70  Aligned_cols=69  Identities=16%  Similarity=0.164  Sum_probs=36.4

Q ss_pred             CCCEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             8665999976985--01899999997399984799999768888788899860895046301323322101243210001
Q gi|254780570|r    2 IRKNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         2 ~k~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      .++.|+||=||-|  |-++.|.+..-    ..++ .-+-|+..           +|+=.   +....-..+-.++.+.+.
T Consensus         4 ~~~~IgifDSGvGGltv~~~i~~~lP----~~~~-iy~~D~~~-----------~PYG~---ks~~~i~~~~~~~~~~l~   64 (157)
T 3ist_A            4 XKQAIGFIDSGVGGLTVVREVLKQLP----HEQV-YYLGDTAR-----------CPYGP---RDKEEVAKFTWEXTNFLV   64 (157)
T ss_dssp             SCCCEEEEESSSTTHHHHHHHHHHCT----TCCE-EEEECGGG-----------CCCTT---SCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHCC----CCCE-EEEECCCC-----------CCCCC---CCHHHHHHHHHHHHHHHH
T ss_conf             77968999689657999999999789----9998-99953789-----------99899---999999999999999998


Q ss_pred             CCCCEEEEEE
Q ss_conf             2343036431
Q gi|254780570|r   80 SIQPDLICLA   89 (205)
Q Consensus        80 ~~~~Dliv~~   89 (205)
                      +.+++++|.|
T Consensus        65 ~~~~~~iviA   74 (157)
T 3ist_A           65 DRGIKXLVIA   74 (157)
T ss_dssp             HTTCSEEEEC
T ss_pred             HCCCCEEEEE
T ss_conf             6599879994


No 165
>>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase; HET: NAP; 2.10A {Methanothermus fervidus} (P:1-139,P:303-337)
Probab=40.54  E-value=24  Score=15.67  Aligned_cols=52  Identities=21%  Similarity=0.215  Sum_probs=31.6

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEE
Q ss_conf             65999976985018999999973999847999997688887888998608950463
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPI   59 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i   59 (205)
                      .|+++.  |.|+--...+++..+.. +.+++.|..-+++ .....+...+.+.+.-
T Consensus         2 IrVgIi--G~G~iGr~~~~al~~~p-d~eivaV~d~~~~-~~~~~~~~~~~~~~~~   53 (174)
T 1cf2_P            2 KAVAIN--GYGTVGKRVADAIAQQD-DMKVIGVSKTRPD-FEARMALKKGYDLYVA   53 (174)
T ss_dssp             EEEEEE--CCSTTHHHHHHHHHTSS-SEEEEEEEESSCS-HHHHHHHHTTCCEEES
T ss_pred             CEEEEE--CCCHHHHHHHHHHHCCC-CCEEEEEECCCCC-HHHHHHHHCCCCEEEE
T ss_conf             699997--99689999999995098-9589999689976-9999996299967998


No 166
>>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3d7k_A* (A:368-563)
Probab=39.95  E-value=16  Score=16.94  Aligned_cols=11  Identities=9%  Similarity=-0.088  Sum_probs=4.3

Q ss_pred             HHHHCCCCEEE
Q ss_conf             99860895046
Q gi|254780570|r   48 KARKEKVPTFP   58 (205)
Q Consensus        48 ~a~~~~Ip~~~   58 (205)
                      .|+.+|++.+.
T Consensus       140 ~A~a~G~~~~~  150 (196)
T 2uz1_A          140 VAAAFGADGYH  150 (196)
T ss_dssp             HHHHTTCEEEE
T ss_pred             HHHHCCCEEEE
T ss_conf             99877997999


No 167
>>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} (A:134-293)
Probab=39.95  E-value=25  Score=15.61  Aligned_cols=53  Identities=9%  Similarity=0.001  Sum_probs=29.8

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEE
Q ss_conf             866599997698501899999997399984799999768888788899860895046
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFP   58 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~   58 (205)
                      .|.|++++..|.  --..++.+..+-. +.+++.|+ |+.....-+.+++++++...
T Consensus         1 d~~rigiIG~G~--~g~~~~~~l~~~~-~~~~v~v~-dr~~~~~~~~~~~~~~~~~~   53 (160)
T 2i99_A            1 SSEVLCILGAGV--QAYSHYEIFTEQF-SFKEVRIW-NRTKENAEKFADTVQGEVRV   53 (160)
T ss_dssp             TCCEEEEECCSH--HHHHHHHHHHHHC-CCSEEEEE-CSSHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCC--CHHHHHHHHHHCC-CCCCEEEE-ECCCHHHHHHHHHHHCCCCC
T ss_conf             763799975640--0788999998228-85541898-23721678999985156641


No 168
>>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} (A:)
Probab=39.94  E-value=25  Score=15.61  Aligned_cols=74  Identities=14%  Similarity=0.133  Sum_probs=38.9

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             98665999976985018999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      |.+++++|.  |.|.--..+.+......  ++++ |+..++  ...+.+...+.++...+..        +...++...-
T Consensus         4 ~~~~~vlIi--G~G~iG~~ia~~L~~~g--~~vv-vvd~~~--~~~~~~~~~~~~~~~gd~~--------~~~~l~~~~~   68 (144)
T 2hmt_A            4 IKNKQFAVI--GLGRFGGSIVKELHRMG--HEVL-AVDINE--EKVNAYASYATHAVIANAT--------EENELLSLGI   68 (144)
T ss_dssp             --CCSEEEE--CCSHHHHHHHHHHHHTT--CCCE-EEESCH--HHHHTTTTTCSEEEECCTT--------CHHHHHTTTG
T ss_pred             CCCCEEEEE--CCCHHHHHHHHHHHHCC--CEEE-EEECCH--HHHHHHHHHCCCEEEECCC--------CHHHHHHCCC
T ss_conf             558828998--87899999999999789--9089-983898--9999998606620351146--------7888863022


Q ss_pred             CCCEEEEEE
Q ss_conf             343036431
Q gi|254780570|r   81 IQPDLICLA   89 (205)
Q Consensus        81 ~~~Dliv~~   89 (205)
                      .++|.++..
T Consensus        69 ~~ad~vi~~   77 (144)
T 2hmt_A           69 RNFEYVIVA   77 (144)
T ss_dssp             GGCSEEEEC
T ss_pred             CCCCEEEEE
T ss_conf             128999999


No 169
>>2j8x_A Uracil-DNA glycosylase; hydrolase/inhibitor, hydrolase/inhibitor complex, EBV, DNA repair, lytic protein, epstein-BARR virus; 2.3A {Epstein-barr virus} (A:48-231)
Probab=39.88  E-value=17  Score=16.70  Aligned_cols=95  Identities=12%  Similarity=0.052  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCE----EEEECCCCCCC-----CCHHHHHHHHCCCCCCEE
Q ss_conf             018999999973999847999997688887888998608950----46301323322-----101243210001234303
Q gi|254780570|r   15 TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPT----FPIPYKDYISR-----REHEKAILMQLSSIQPDL   85 (205)
Q Consensus        15 snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~----~~i~~~~~~~~-----~~~~~~l~~~l~~~~~Dl   85 (205)
                      ..|++|++.....--..       ..|..+.++.=.+.|+=.    .++...+-.+.     +.+.+.+++.|.+.+..+
T Consensus        42 ~SL~NI~kel~~d~~~~-------~~p~~g~L~~WakQGVLLLNt~LTv~~g~~~SH~~~gWe~ft~~ii~~l~~~~~~i  114 (184)
T 2j8x_A           42 PSLRNIYAELHRSLPEF-------SPPDHGCLDAWASQGVLLLNTILTVQKGKPGSHADIGWAWFTDHVISLLSERLKAC  114 (184)
T ss_dssp             HHHHHHHHHHHHHCTTC-------CCCSSCCCHHHHTTTEEEEESSCCEETTBTTTTTTSSHHHHHHHHHHHHHHHCSSC
T ss_pred             CHHHHHHHHHHHHCCCC-------CCCCCCCHHHHHHCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf             22999999998634768-------76677985788649768886578873799998555581889999999998146885


Q ss_pred             EEEEEEEEECC--CHHHHCCCCCE-EECCCCCCCC
Q ss_conf             64311222057--21321066542-3135322333
Q gi|254780570|r   86 ICLAGYMRLLS--RDFVESYKNKI-LNIHPSLLPL  117 (205)
Q Consensus        86 iv~~g~~~il~--~~~l~~~~~~~-iN~HpslLP~  117 (205)
                      |++. |+..-.  ..+++.-+.-+ ---|||.|-.
T Consensus       115 vf~L-wG~~A~~~~~~i~~~~h~il~~~HPSpls~  148 (184)
T 2j8x_A          115 VFML-WGAKAGDKASLINSKKHLVLTSQHPSPLAQ  148 (184)
T ss_dssp             EEEE-ESHHHHGGGGGSCTTTSEEEEECCSSGGGG
T ss_pred             EEEE-ECCHHHHHHHHCCCCCCEEEECCCCCCCCC
T ss_conf             9998-103455666532578976997679995113


No 170
>>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} (A:1-171)
Probab=39.82  E-value=25  Score=15.60  Aligned_cols=33  Identities=15%  Similarity=0.118  Sum_probs=19.2

Q ss_pred             CCCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             866599997698-5018999999973999847999997688
Q gi|254780570|r    2 IRKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         2 ~k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      |.+||+|+++|. |+.+-..+-   ++  .++|.+  .|+.
T Consensus         1 MsmkI~ViG~G~~G~~iA~~la---~~--G~~V~~--~d~~   34 (171)
T 3gg2_A            1 MSLDIAVVGIGYVGLVSATCFA---EL--GANVRC--IDTD   34 (171)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHH---HT--TCEEEE--ECSC
T ss_pred             CCCEEEEECCCHHHHHHHHHHH---HC--CCCEEE--EECC
T ss_conf             9976999898878999999999---67--991899--9899


No 171
>>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} (A:1-125,A:392-441)
Probab=39.82  E-value=25  Score=15.60  Aligned_cols=31  Identities=13%  Similarity=0.151  Sum_probs=17.7

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             98665999976985018999999973999847999
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVG   35 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~   35 (205)
                      |.+|++.|+.+|+  --.++.++..+.  +++|..
T Consensus         1 M~gK~VLVtGAGg--IG~~ia~~L~~~--G~~V~v   31 (175)
T 1ff9_A            1 MATKSVLMLGSGF--VTRPTLDVLTDS--GIKVTV   31 (175)
T ss_dssp             -CCCEEEEECCST--THHHHHHHHHTT--TCEEEE
T ss_pred             CCCCEEEEECCCH--HHHHHHHHHHHC--CCEEEE
T ss_conf             9987799988889--999999999829--497999


No 172
>>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} (A:456-647)
Probab=39.70  E-value=25  Score=15.59  Aligned_cols=12  Identities=33%  Similarity=0.656  Sum_probs=6.0

Q ss_pred             CEEEEEECCCCH
Q ss_conf             659999769850
Q gi|254780570|r    4 KNIVIFISGEGT   15 (205)
Q Consensus         4 ~riavl~SG~Gs   15 (205)
                      .|.++.+.|-||
T Consensus        76 ~~~vv~i~GDGs   87 (192)
T 1t9b_A           76 ESLVIDIDGDAS   87 (192)
T ss_dssp             TSEEEEEEEHHH
T ss_pred             CCCEEEEECCHH
T ss_conf             995699977557


No 173
>>2qk4_A Trifunctional purine biosynthetic protein adenosine-3; purine synthesis, enzyme, protein-ATP complex, structural genomics; HET: ATP; 2.45A {Homo sapiens} (A:1-120)
Probab=39.36  E-value=12  Score=17.86  Aligned_cols=71  Identities=13%  Similarity=0.229  Sum_probs=33.9

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHH-HHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             665999976985018999999973999847999997688887888-9986089504630132332210124321000123
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLV-KARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~-~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      ++|+.|.  |+|.---+|..++.+..   .+.-|++ -|.-.|.. .++..+++   ++..+       -+++.++.++.
T Consensus        24 ~mkVLVi--GsGgREHAia~aL~~S~---~v~~v~~-apGN~G~~~~~~~~~v~---i~~~d-------~~~i~~~a~~~   87 (120)
T 2qk4_A           24 AARVLII--GSGGREHTLAWKLAQSH---HVKQVLV-APGNAGTACSEKISNTA---ISISD-------HTALAQFCKEK   87 (120)
T ss_dssp             SEEEEEE--ECSHHHHHHHHHHTTCT---TEEEEEE-EECCGGGSBSSSEEECC---CCSSC-------HHHHHHHHHHH
T ss_pred             CCEEEEE--CCCHHHHHHHHHHHHCC---CCCEEEE-ECCCHHHHCCCCEECCC---CCCCC-------HHHHHHHHHHH
T ss_conf             8769999--98889999999997499---9888999-77977884004313135---58579-------99999999985


Q ss_pred             CCEEEEEE
Q ss_conf             43036431
Q gi|254780570|r   82 QPDLICLA   89 (205)
Q Consensus        82 ~~Dliv~~   89 (205)
                      ++||+|..
T Consensus        88 ~iDlvviG   95 (120)
T 2qk4_A           88 KIEFVVVG   95 (120)
T ss_dssp             TCCEEEEC
T ss_pred             CCCEEEEC
T ss_conf             99999989


No 174
>>4eug_A UDG, UNG, protein (glycosylase); 1.40A {Escherichia coli} (A:45-229)
Probab=39.31  E-value=11  Score=18.10  Aligned_cols=98  Identities=11%  Similarity=0.155  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCE----EEEECCCCCCC-----CCHHHHHHHHCCCCCCEEE
Q ss_conf             18999999973999847999997688887888998608950----46301323322-----1012432100012343036
Q gi|254780570|r   16 NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPT----FPIPYKDYISR-----REHEKAILMQLSSIQPDLI   86 (205)
Q Consensus        16 nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~----~~i~~~~~~~~-----~~~~~~l~~~l~~~~~Dli   86 (205)
                      .|++|++..+..--...       .|..+-++.-.+.|+=.    ..+...+-.+.     +.+.+.+++.|.+.+.++|
T Consensus        44 SL~NI~kel~~~~~~~~-------~p~~g~L~~Wa~QGVLLLN~~LTv~~~~~~SH~~~gWe~ft~~ii~~i~~~~~~iv  116 (185)
T 4eug_A           44 SLLNMYKELENTIPGFT-------RPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVV  116 (185)
T ss_dssp             HHHHHHHHHHHHSTTCC-------CCSCCCCHHHHTTTEEEEESSCCEETTBTTTTTTSSHHHHHHHHHHHHHHHCSSCE
T ss_pred             CHHHHHHHHHHHCCCCC-------CCCCCCCHHHHHCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             49999999998738997-------78998540454167267742589973666663101289999999999971788869


Q ss_pred             EEEEEEEECC--CHHHHCCCCCEE-ECCCCCCCCCCCC
Q ss_conf             4311222057--213210665423-1353223332444
Q gi|254780570|r   87 CLAGYMRLLS--RDFVESYKNKIL-NIHPSLLPLFPGL  121 (205)
Q Consensus        87 v~~g~~~il~--~~~l~~~~~~~i-N~HpslLP~yrG~  121 (205)
                      ++. |+..-.  ..+++..+.-+| --|||.|-.+||.
T Consensus       117 f~L-wG~~A~~~~~~i~~~~~~vl~~~HPSPls~~~~F  153 (185)
T 4eug_A          117 FLL-WGSHAQKKGAIIDKQRHHVLKAPQPSPLSAHRGF  153 (185)
T ss_dssp             EEE-ESHHHHHHTTTSCTTTSEEEEECCSSTTTGGGTT
T ss_pred             EEE-EEEHHHHHHHHHCCCCCEEEECCCCCCHHCCCCC
T ss_conf             998-5111677876504678659983899802047898


No 175
>>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis} (A:1-118,A:210-442)
Probab=39.15  E-value=24  Score=15.66  Aligned_cols=26  Identities=19%  Similarity=0.236  Sum_probs=14.3

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCC
Q ss_conf             9866599997698501899999997399
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKND   28 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~   28 (205)
                      |+++|+.|..|  |.=--+|..++.+..
T Consensus        19 ~~~~~vlvig~--g~reha~~~~~~~s~   44 (351)
T 3lp8_A           19 PGSMNVLVIGS--GGREHSMLHHIRKST   44 (351)
T ss_dssp             -CCEEEEEEEC--SHHHHHHHHHHTTCT
T ss_pred             CCCCEEEEECC--CHHHHHHHHHHHHCC
T ss_conf             99978999897--889999999997498


No 176
>>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli} (A:1055-1291,A:1361-1404)
Probab=38.70  E-value=26  Score=15.48  Aligned_cols=80  Identities=18%  Similarity=0.102  Sum_probs=41.9

Q ss_pred             CCCC-H--HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEE
Q ss_conf             6985-0--189999999739998479999976888878889986089504630132332210124321000123430364
Q gi|254780570|r   11 SGEG-T--NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLIC   87 (205)
Q Consensus        11 SG~G-s--nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv   87 (205)
                      +|.| |  +|+.+..++..+.    . +++-+.+.+....++++.+...--+-.....+.++..+.+...+....++++|
T Consensus        36 pGsGKTtLaL~~~~~~~~~g~----~-vlyIDtE~~~~~~r~~~lg~d~d~l~i~~~~~~~~~~~~i~~l~~~~~~~liV  110 (281)
T 3cmu_A           36 ESSGKTTLTLQVIAAAQREGK----T-CAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIV  110 (281)
T ss_dssp             TTSSHHHHHHHHHHHHHTTTC----C-EEEECTTSCCCHHHHHHTTCCTTTCEEECCSSHHHHHHHHHHHHHHTCCSEEE
T ss_pred             CCCCCEEEEEEECCHHHHCCC----C-HHHCCHHHHHCHHHHHHCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHEEEE
T ss_conf             778847886410373332355----1-01000343346899987186433105037402789999998763111010220


Q ss_pred             EEEEEEEC
Q ss_conf             31122205
Q gi|254780570|r   88 LAGYMRLL   95 (205)
Q Consensus        88 ~~g~~~il   95 (205)
                      .=....+.
T Consensus       111 IDSi~al~  118 (281)
T 3cmu_A          111 VDSVAALT  118 (281)
T ss_dssp             ESCGGGCC
T ss_pred             HHHHHHHC
T ss_conf             20576517


No 177
>>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima} (A:1-129)
Probab=37.70  E-value=23  Score=15.82  Aligned_cols=72  Identities=8%  Similarity=0.090  Sum_probs=35.7

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH--HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             6659999769850189999999739998479999976888878--88998608950463013233221012432100012
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQG--LVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~--l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      ..|+++.  |.|.-....+.+..+. -+.+++.|+.-++....  .+.++.++.+...      .+       .-+.+..
T Consensus         2 tirv~ii--G~G~~g~~~~~~l~~~-~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~------~~-------~~~~l~~   65 (129)
T 3ip3_A            2 SLKICVI--GSSGHFRYALEGLDEE-CSITGIAPGVPEEDLSKLEKAISEXNIKPKKY------NN-------WWEXLEK   65 (129)
T ss_dssp             CEEEEEE--CSSSCHHHHHTTCCTT-EEEEEEECSSTTCCCHHHHHHHHTTTCCCEEC------SS-------HHHHHHH
T ss_pred             CEEEEEE--CCCHHHHHHHHHHHHC-CCEEEEEECCCCCCHHHHHHHHHHHCCCCEEE------CC-------HHHHHCC
T ss_conf             3059999--5699999999987616-99899997368858999999999849997351------89-------9999648


Q ss_pred             CCCEEEEEEE
Q ss_conf             3430364311
Q gi|254780570|r   81 IQPDLICLAG   90 (205)
Q Consensus        81 ~~~Dliv~~g   90 (205)
                      .++|+++.+.
T Consensus        66 ~~~D~V~i~t   75 (129)
T 3ip3_A           66 EKPDILVINT   75 (129)
T ss_dssp             HCCSEEEECS
T ss_pred             CCCCEEEEEC
T ss_conf             8988999813


No 178
>>1vi2_A Shikimate 5-dehydrogenase 2; structural genomics, oxidoreductase; HET: MSE NAD; 2.10A {Escherichia coli} (A:123-257)
Probab=37.64  E-value=27  Score=15.37  Aligned_cols=33  Identities=9%  Similarity=0.175  Sum_probs=16.6

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             665999976985018999999973999847999997
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFS   38 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Vis   38 (205)
                      +-|.+ ++.|.|.--+++..++.+..  +.+..+..
T Consensus         3 ~~K~~-lVtGa~GiG~aia~~la~~G--~~vi~i~~   35 (135)
T 1vi2_A            3 KGKTX-VLLGAGGASTAIGAQGAIEG--LKEIKLFN   35 (135)
T ss_dssp             TTCEE-EEECCSHHHHHHHHHHHHTT--CSEEEEEE
T ss_pred             CCCEE-EEECCCCCHHHHHHHHHHCC--CCCCCCCC
T ss_conf             78866-88535552047889987517--65331136


No 179
>>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} (A:100-248)
Probab=37.62  E-value=27  Score=15.37  Aligned_cols=41  Identities=20%  Similarity=0.224  Sum_probs=30.8

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCCCC
Q ss_conf             665999976985-01899999997399984799999768888
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNSNA   43 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~da   43 (205)
                      .++++.++.|.| +-+.+++++....+.+.++.++.+++...
T Consensus         7 ~~~ii~iagG~GItP~~s~i~~~~~~~~~~~v~l~~~~r~~~   48 (149)
T 1fdr_A            7 CETLWMLATGTAIGPYLSILRLGKDLDRFKNLVLVHAARYAA   48 (149)
T ss_dssp             CSEEEEEEEGGGGHHHHHHHHHCCSCTTCSEEEEEEEESSGG
T ss_pred             CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHH
T ss_conf             777899992787562899999988638863799985068878


No 180
>>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp} (A:1-127)
Probab=37.58  E-value=27  Score=15.37  Aligned_cols=69  Identities=16%  Similarity=0.101  Sum_probs=35.2

Q ss_pred             CCEEEEEECCCCHHHHHH-HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             665999976985018999-9999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSL-IQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~I-l~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      +.|+++.  |.|+-.... +.+.+. .-+++++.|+..++     ++++...-.....            ..+-+.+.+.
T Consensus         7 ~ikvgii--G~G~~~~~~~~~~l~~-~~~~~iv~v~d~~~-----~~~~~~~~~~~~~------------~~~~~~l~~~   66 (127)
T 3e82_A            7 TINIALI--GYGFVGKTFHAPLIRS-VPGLNLAFVASRDE-----EKVKRDLPDVTVI------------ASPEAAVQHP   66 (127)
T ss_dssp             CEEEEEE--CCSHHHHHTHHHHHHT-STTEEEEEEECSCH-----HHHHHHCTTSEEE------------SCHHHHHTCT
T ss_pred             CCEEEEE--CCCHHHHHHHHHHHHH-CCCCEEEEEECCCH-----HHHHHHCCCCCEE------------CCHHHHHCCC
T ss_conf             8749999--7819999999999971-98968999987999-----9999647789647------------9999995599


Q ss_pred             CCEEEEEEEE
Q ss_conf             4303643112
Q gi|254780570|r   82 QPDLICLAGY   91 (205)
Q Consensus        82 ~~Dliv~~g~   91 (205)
                      ++|+++.+.-
T Consensus        67 ~vd~V~i~t~   76 (127)
T 3e82_A           67 DVDLVVIASP   76 (127)
T ss_dssp             TCSEEEECSC
T ss_pred             CCCEEEEECC
T ss_conf             9988999331


No 181
>>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli} (A:)
Probab=37.37  E-value=27  Score=15.35  Aligned_cols=55  Identities=15%  Similarity=-0.031  Sum_probs=32.7

Q ss_pred             CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECCCC--C----HHHHHHHHCCCCEEEEECC
Q ss_conf             66599997698-50-189999999739998479999976888--8----7888998608950463013
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDNSN--A----QGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~~d--a----~~l~~a~~~~Ip~~~i~~~   62 (205)
                      ..|++|.+||+ .| .+..++...     ..++..+..|...  .    ..-+.++++|||.++++..
T Consensus        45 ~~~v~v~~SGGkDSt~ll~l~~~~-----~~~~~~~~~d~g~~~~~~~~~~~~~~~~lgi~~~~~~~~  107 (252)
T 2o8v_A           45 PGEYVLSSSFGIQAAVSLHLVNQI-----RPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRAT  107 (252)
T ss_dssp             CSCEEEECCCSTTHHHHHHHHHHH-----STTCEEEECCCSCBCHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHC-----CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCC
T ss_conf             998899933877899999999815-----899508999679987999999999998709834786375


No 182
>>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix K1} (A:1-129)
Probab=37.30  E-value=27  Score=15.34  Aligned_cols=65  Identities=9%  Similarity=0.021  Sum_probs=30.7

Q ss_pred             CCEEEEEECCCCH-HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             6659999769850-189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    3 RKNIVIFISGEGT-NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         3 k~riavl~SG~Gs-nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      +.|+++.  |.|+ .-...+.+++.. ...+++.|.. +...     ++..++|.+.-             .....+...
T Consensus        13 ~~rv~ii--G~g~~~~~~~~~~~~~~-~~~~i~~v~~-~~~~-----~~~~~~~~~~~-------------~~~~~~~~~   70 (129)
T 2yv2_A           13 ETRVLVQ--GITGREGSFHAKAMLEY-GTKVVAGVTP-GKGG-----SEVHGVPVYDS-------------VKEALAEHP   70 (129)
T ss_dssp             TCEEEEE--TTTSHHHHHHHHHHHHH-TCEEEEEECT-TCTT-----CEETTEEEESS-------------HHHHHHHCT
T ss_pred             CCEEEEE--CCCCCHHHHHHHHHHHH-CCCEEEEECC-CCCC-----CEEECEECCCC-------------HHHHHCCCC
T ss_conf             9839998--89783767999999982-9937988679-9885-----17818722031-------------877641688


Q ss_pred             CCEEEEEE
Q ss_conf             43036431
Q gi|254780570|r   82 QPDLICLA   89 (205)
Q Consensus        82 ~~Dliv~~   89 (205)
                      ++|+++.+
T Consensus        71 ~~D~v~i~   78 (129)
T 2yv2_A           71 EINTSIVF   78 (129)
T ss_dssp             TCCEEEEC
T ss_pred             CCCEEEEE
T ss_conf             75389994


No 183
>>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} (A:153-276)
Probab=36.70  E-value=28  Score=15.28  Aligned_cols=98  Identities=15%  Similarity=0.141  Sum_probs=54.7

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEE--CCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             66599997698-5018999999973999847999997--68888788899860895046301323322101243210001
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFS--DNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Vis--n~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      .+|+++....+ |..+.+++....  .++.++..+--  -.++...++.+++.|..+.....-            -+.++
T Consensus         3 glkia~vGd~~~~rv~~Sl~~~~~--~~g~~~~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~------------~ea~~   68 (124)
T 1ml4_A            3 GLKIGLLGDLKYGRTVHSLAEALT--FYDVELYLISPELLRMPRHIVEELREKGMKVVETTTL------------EDVIG   68 (124)
T ss_dssp             SEEEEEESCTTTCHHHHHHHHHGG--GSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCT------------HHHHT
T ss_pred             CCEEEECCCCCCCHHHHHHHHHHH--HCCCCEEEECCHHHCCCHHHHHHHHHCCCCEEECCCH------------HHHHC
T ss_conf             676652068641233887999999--7899199979636538799999999719821212898------------99630


Q ss_pred             CCCCEEEEEEEE--E--------------EECCCHHHHCCCCCEEECCCCCCCCC
Q ss_conf             234303643112--2--------------20572132106654231353223332
Q gi|254780570|r   80 SIQPDLICLAGY--M--------------RLLSRDFVESYKNKILNIHPSLLPLF  118 (205)
Q Consensus        80 ~~~~Dliv~~g~--~--------------~il~~~~l~~~~~~~iN~HpslLP~y  118 (205)
                        +.|+|..-.|  +              ..+..++++..+.+++=+||  ||+.
T Consensus        69 --~aDvvy~~~w~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~aivmH~--LPR~  119 (124)
T 1ml4_A           69 --KLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHP--LPRV  119 (124)
T ss_dssp             --TCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECC--SCCS
T ss_pred             --CCCEEECCEECCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEECC--CCCC
T ss_conf             --57512122002354525899998850765789999716999899699--9886


No 184
>>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum} (A:)
Probab=36.63  E-value=28  Score=15.27  Aligned_cols=32  Identities=28%  Similarity=0.572  Sum_probs=22.6

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             665999976985018999999973999847999997
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFS   38 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Vis   38 (205)
                      .+||++|  |+||.+..++...+.-  ..+++.|++
T Consensus        10 ~~riv~l--~GGtG~~~ll~glk~~--~~~lt~IV~   41 (341)
T 2p0y_A           10 RPKIVVI--GGGTGLPVVLNGLRKQ--AVDITAVVT   41 (341)
T ss_dssp             CCEEEEE--CCGGGHHHHHHHHHHS--SSEEEEECC
T ss_pred             CCEEEEE--CCCCCHHHHHHHHHHC--CCCEEEEEE
T ss_conf             9749998--8962389999998647--998079998


No 185
>>1b0z_A Protein (phosphoglucose isomerase); autocrinefactor, neuroleukin, crystallography motility; 2.30A {Bacillus stearothermophilus} (A:46-219)
Probab=35.66  E-value=29  Score=15.17  Aligned_cols=48  Identities=10%  Similarity=0.029  Sum_probs=22.4

Q ss_pred             EEEECCCCHHH--HHHHHHHHCCC----CCCEEEEEEECCCCCHHHHHH-HHCCC
Q ss_conf             99976985018--99999997399----984799999768888788899-86089
Q gi|254780570|r    7 VIFISGEGTNM--LSLIQATKKND----YPAEIVGVFSDNSNAQGLVKA-RKEKV   54 (205)
Q Consensus         7 avl~SG~Gsnl--~~Il~~~~~~~----~~~eI~~Visn~~da~~l~~a-~~~~I   54 (205)
                      +|++--+||.|  +++.++.....    ......+.+-++-|...+..+ ...+.
T Consensus        30 vv~iGiGGS~LG~~~l~~al~~~~~~~~~~~~~~~~~~dn~Dp~~~~~~l~~l~~   84 (174)
T 1b0z_A           30 LVVIGIGGSYLGARAAIEALSHTFHNQMNDTTQIYFAGQNISSTYISHLLDVLEG   84 (174)
T ss_dssp             EEEECCGGGTHHHHHHHHHHSCTTGGGSTTSCEEEEESSSCCHHHHHHHHHHHTT
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCC
T ss_conf             9998040676999999999876876422677637983189997999999832477


No 186
>>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, structural genomics; 2.00A {Methanocaldococcus jannaschii DSM2661} (A:)
Probab=34.91  E-value=29  Score=15.09  Aligned_cols=86  Identities=10%  Similarity=-0.008  Sum_probs=45.8

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHH----HHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             65999976985018999999973999847999997688887888----99860895046301323322101243210001
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLV----KARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~----~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      .++.-+++|+|.....+.+....   ...+++|  |. +...++    ++...+++-..+-..+..+         -.+.
T Consensus        79 ~~vLDiGcG~G~~~~~la~~~~~---~~~v~gi--D~-s~~~i~~a~~~~~~~g~~~v~~~~~d~~~---------l~~~  143 (215)
T 2yxe_A           79 MKVLEIGTGCGYHAAVTAEIVGE---DGLVVSI--ER-IPELAEKAERTLRKLGYDNVIVIVGDGTL---------GYEP  143 (215)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHCT---TSEEEEE--ES-CHHHHHHHHHHHHHHTCTTEEEEESCGGG---------CCGG
T ss_pred             CEEEEECCCCCHHHHHHHHHHCC---CCEEEEE--EC-CHHHHHHHHHHHHHHCCCCCEEEECCHHC---------CCCC
T ss_conf             45899579887999999998564---7739999--42-78999888888987287640687456201---------7544


Q ss_pred             CCCCEEEEEEEEEEECCCHHHHCCC
Q ss_conf             2343036431122205721321066
Q gi|254780570|r   80 SIQPDLICLAGYMRLLSRDFVESYK  104 (205)
Q Consensus        80 ~~~~Dliv~~g~~~il~~~~l~~~~  104 (205)
                      ...+|+|++.+-+.-++....+..+
T Consensus       144 ~~~fD~V~~~~~~~~~~~~~~~~l~  168 (215)
T 2yxe_A          144 LAPYDRIYTTAAGPKIPEPLIRQLK  168 (215)
T ss_dssp             GCCEEEEEESSBBSSCCHHHHHTEE
T ss_pred             CCCCCEEEEECCHHHHHHHHHHHCC
T ss_conf             6775157983356777499998648


No 187
>>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} (A:)
Probab=34.13  E-value=30  Score=15.00  Aligned_cols=57  Identities=11%  Similarity=-0.072  Sum_probs=33.0

Q ss_pred             CEEEEEECCC-CH-HHHHHHHHH-HCCCCCCEEEEEEECCCC--C----HHHHHHHHCCCCEEEEECC
Q ss_conf             6599997698-50-189999999-739998479999976888--8----7888998608950463013
Q gi|254780570|r    4 KNIVIFISGE-GT-NMLSLIQAT-KKNDYPAEIVGVFSDNSN--A----QGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus         4 ~riavl~SG~-Gs-nl~~Il~~~-~~~~~~~eI~~Visn~~d--a----~~l~~a~~~~Ip~~~i~~~   62 (205)
                      .+++|-+||+ .| .|..++... ...  +.++..+..|..-  .    ..-+.|++.+||.+++...
T Consensus        47 ~~v~va~SGGkDS~~lL~ll~~l~~~~--~~~i~~~~~d~g~~~~~~~~~~~~~~~~~~i~~~v~~~~  112 (325)
T 1zun_A           47 DNPVXLYSIGKDSAVXLHLARKAFFPG--KLPFPVXHVDTRWKFQEXYRFRDQXVEEXGLDLITHINP  112 (325)
T ss_dssp             SSEEEECCSSHHHHHHHHHHHHHHTTS--CCSSCEEEECCSCCCHHHHHHHHHHHHTTTCCEEEECC-
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHHHHH--CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEECCH
T ss_conf             987999667689999999999987640--898569996688850899999999999953565042170


No 188
>>2boo_A UDG, uracil-DNA glycosylase; UNG, base excision repair, radiation resistance, DNA damage, DNA repair, glycosidase, hydrolase; 1.8A {Deinococcus radiodurans} (A:)
Probab=33.83  E-value=19  Score=16.44  Aligned_cols=57  Identities=12%  Similarity=0.300  Sum_probs=33.7

Q ss_pred             CCHHHHHHHHCCCCCCEEEEEEEEEEECC--CHHHHCCCCCEE-ECCCCCCC--CCCCCCCCC
Q ss_conf             10124321000123430364311222057--213210665423-13532233--324442121
Q gi|254780570|r   68 REHEKAILMQLSSIQPDLICLAGYMRLLS--RDFVESYKNKIL-NIHPSLLP--LFPGLHTHR  125 (205)
Q Consensus        68 ~~~~~~l~~~l~~~~~Dliv~~g~~~il~--~~~l~~~~~~~i-N~HpslLP--~yrG~~~~~  125 (205)
                      +.|.+.+++.|.+.+..+|++. |+..-.  ..+++..+..+| --|||.|-  .|.|.+++.
T Consensus       161 e~ft~~ii~~l~~~~~~iVf~L-WG~~A~~~~~~i~~~~~~il~s~HPSpls~~~F~~~~~F~  222 (247)
T 2boo_A          161 EHFTDAVIKAVNAKEERVVFIL-WGSYARKKKKLITGKNHVVIESGHPSPLSEQYFFGTRPFS  222 (247)
T ss_dssp             HHHHHHHHHHHHTCSSCCEEEE-ESHHHHGGGGGCCCTTCEEEEECCSSTTTGGGTTTCCHHH
T ss_pred             HHHHHHHHHHHHHCCCCEEEEE-EHHHHHHHHHHCCCCCCEEEECCCCCHHHCCCCCCCCHHH
T ss_conf             9999999999982568859997-1578998874046778659970898811138998998489


No 189
>>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} (A:146-268)
Probab=33.72  E-value=31  Score=14.96  Aligned_cols=97  Identities=13%  Similarity=0.188  Sum_probs=53.8

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEEC--CCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             66599997698-50189999999739998479999976--8888788899860895046301323322101243210001
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSD--NSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn--~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      .+|+++..-.+ |..+.+++....  .++.++..+..-  .++..  ..++..+..+.....            +.+.+.
T Consensus         4 g~kia~vGD~~~~rv~~Sl~~~l~--~~g~~v~~~~p~~~~~~~~--~~~~~~~~~~~~~~d------------~~ea~~   67 (123)
T 1pg5_A            4 GLVFALLGDLKYARTVNSLLRILT--RFRPKLVYLISPQLLRARK--EILDELNYPVKEVEN------------PFEVIN   67 (123)
T ss_dssp             TCEEEEEECCSSCHHHHHHHHHGG--GSCCSEEEEECCGGGCCCH--HHHTTCCSCEEEESC------------GGGTGG
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHH--HCCCCEEECCCHHHCCCHH--HHHHHHCCCCCCCCC------------HHHHHC
T ss_conf             665899726872046756999998--7399646426736406517--777652564222468------------888724


Q ss_pred             CCCCEEEEEEEEE----------------EECCCHHHHCCCCCEEECCCCCCCCCC
Q ss_conf             2343036431122----------------205721321066542313532233324
Q gi|254780570|r   80 SIQPDLICLAGYM----------------RLLSRDFVESYKNKILNIHPSLLPLFP  119 (205)
Q Consensus        80 ~~~~Dliv~~g~~----------------~il~~~~l~~~~~~~iN~HpslLP~yr  119 (205)
                        +.|+|..-.|-                ..+.+++++..+..++=+||  ||+..
T Consensus        68 --~aDvvy~~~~~~~~~~~~~~~~~~~~~~~vt~~~l~~~k~~ai~mH~--LPR~~  119 (123)
T 1pg5_A           68 --EVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHP--LPRVN  119 (123)
T ss_dssp             --GCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECC--SCCSS
T ss_pred             --CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEECC--CCCCC
T ss_conf             --55357640344344204788888887740369999726989799799--99988


No 190
>>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TM1393, structural genomics, JCSG, joint center for structural genomics, PSI; HET: CTP; 2.67A {Thermotoga maritima} (A:)
Probab=33.67  E-value=31  Score=14.95  Aligned_cols=39  Identities=10%  Similarity=0.140  Sum_probs=22.9

Q ss_pred             CCCCEEEEEECCCCHH-----------------HHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             9866599997698501-----------------899999997399984799999768
Q gi|254780570|r    1 MIRKNIVIFISGEGTN-----------------MLSLIQATKKNDYPAEIVGVFSDN   40 (205)
Q Consensus         1 M~k~riavl~SG~Gsn-----------------l~~Il~~~~~~~~~~eI~~Visn~   40 (205)
                      |.+.+.+||+.|.||=                 ++..+++...... .++..|.++.
T Consensus        11 ~~~~~aiIlAaG~gsRl~~~~pK~Ll~i~gkpli~~~i~~l~~~~~-~~~iiv~~~~   66 (234)
T 1vpa_A           11 HHMNVAILLAAGKGERMSENVPKQFLEIEGRMLFEYPLSTFLKSEA-IDGVVIVTRR   66 (234)
T ss_dssp             CCCEEEEEEECCCCGGGCCSSCGGGCEETTEETTHHHHHHHHHCTT-CSEEEEEECG
T ss_pred             CCCCEEEECCCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHCCC-CCCCCCCCCC
T ss_conf             8770899946877623897998437078999989999999996878-4522322351


No 191
>>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} (A:1-185,A:357-384)
Probab=33.27  E-value=31  Score=14.91  Aligned_cols=188  Identities=10%  Similarity=0.057  Sum_probs=81.7

Q ss_pred             CEEEEEECCCCH---HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCC-CEEEEECCC-CCCCCC----HHHHH
Q ss_conf             659999769850---189999999739998479999976888878889986089-504630132-332210----12432
Q gi|254780570|r    4 KNIVIFISGEGT---NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKV-PTFPIPYKD-YISRRE----HEKAI   74 (205)
Q Consensus         4 ~riavl~SG~Gs---nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~I-p~~~i~~~~-~~~~~~----~~~~l   74 (205)
                      .||++++ |+=+   -+..++++.++.. ..++..+.|..-+......-++.++ +...+.... ..+...    .=..+
T Consensus         1 ~KIl~v~-GtR~e~iklaPv~~al~~~~-~~~~~v~~tg~h~~~~~~~i~~dg~~~~~~~~l~~~~~~~~~~~~~~i~~l   78 (213)
T 1vgv_A            1 XKVLTVF-GTRPEAIKXAPLVHALAKDP-FFEAKVCVTAQHREXLDQVLKLFSIVPDYDLNIXQPGQGLTEITCRILEGL   78 (213)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHHHHHST-TCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHHHH
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHHHHHCC-CCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             9599999-73572999999999997389-987799991889899999998618787745235899999999999999864


Q ss_pred             HHHCCCCCCEEEEEEEEEEECCCHHHHC--CCCCEEECCCCCCCCCC--CC-CCCCCHHCCCCCCCCCCEEEECCCCCCC
Q ss_conf             1000123430364311222057213210--66542313532233324--44-2121000024653445303312321866
Q gi|254780570|r   75 LMQLSSIQPDLICLAGYMRLLSRDFVES--YKNKILNIHPSLLPLFP--GL-HTHRRVLQSGIKITGCTVHMVTANMDEG  149 (205)
Q Consensus        75 ~~~l~~~~~Dliv~~g~~~il~~~~l~~--~~~~~iN~HpslLP~yr--G~-~~~~~ai~~g~~~~G~TiH~v~~~~D~G  149 (205)
                      .+.+...+||+|++.|...--..--+..  .+..++-++.|+--.-+  |+ ....+-...  +  =+++|+...+.-.-
T Consensus        79 ~~vl~~~kPDlVlV~GD~~~~la~AlaA~~~~IPVaHieaGlrs~d~~~g~~ee~~R~~id--~--la~lhF~~t~~~r~  154 (213)
T 1vgv_A           79 KPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTG--H--LAXYHFSPTETSRQ  154 (213)
T ss_dssp             HHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSCTTSSTTHHHHHHHHH--T--TCSEEEESSHHHHH
T ss_pred             HHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHCC--C--CCEEEEECCHHHHH
T ss_conf             8889744665403203653113489998741643898622446677321463666665314--3--24088742588998


Q ss_pred             CEE----EEEEEECCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHCCCEEEECC
Q ss_conf             267----7899871899899999999999999--99999999998695699898
Q gi|254780570|r  150 PII----AQAAVPVSSQDTESSLSQKVLSAEH--LLYPLALKYTILGKTSNSND  197 (205)
Q Consensus       150 ~Ii----~q~~~~i~~~d~~~~l~~rv~~~E~--~l~~~~i~~~~~g~i~~~~~  197 (205)
                      ..+    ..+++.+..+-..+.+......++.  +.-.+.++.+-.+|+.+-..
T Consensus       155 ~L~~eG~~~~rI~vvGnp~iDal~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (213)
T 1vgv_A          155 NLLRENVADSRIFITGNTVIDALLWVRDQVXGDGQACSRILEALKNNRISLGSH  208 (213)
T ss_dssp             HHHHTTCCGGGEEECCCHHHHHHHHHHHHTTCCSCHHHHHHHHHHHTCCCC---
T ss_pred             HHHHCCCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf             888607885423021571376787766543189859999999998379887865


No 192
>>3i45_A Twin-arginine translocation pathway signal protein; structural genomics, protein structure initiative; 1.36A {Rhodospirillum rubrum atcc 11170} (A:125-260,A:324-387)
Probab=33.27  E-value=31  Score=14.91  Aligned_cols=35  Identities=6%  Similarity=-0.070  Sum_probs=12.9

Q ss_pred             CEEEEEECCC--CH-HHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             6599997698--50-18999999973999847999997
Q gi|254780570|r    4 KNIVIFISGE--GT-NMLSLIQATKKNDYPAEIVGVFS   38 (205)
Q Consensus         4 ~riavl~SG~--Gs-nl~~Il~~~~~~~~~~eI~~Vis   38 (205)
                      +|++++.+..  |. .++.+.+.......++.+...++
T Consensus        19 kkVaII~~d~~yG~~~~~~f~~~l~~~G~~V~~~~~i~   56 (200)
T 3i45_A           19 TRWATIAPNYEYGQSAVARFKELLLAARPEVTFVAEQW   56 (200)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred             CEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf             17854478967889999988877752366136887664


No 193
>>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli} (A:357-593,A:665-705)
Probab=32.99  E-value=32  Score=14.88  Aligned_cols=75  Identities=17%  Similarity=0.116  Sum_probs=39.2

Q ss_pred             CCCC-H--HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEE
Q ss_conf             6985-0--189999999739998479999976888878889986089504630132332210124321000123430364
Q gi|254780570|r   11 SGEG-T--NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLIC   87 (205)
Q Consensus        11 SG~G-s--nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv   87 (205)
                      +|.| |  ||+.+..++..+.    .+ ++-+-+.+..-.+++..++..--+-.....+.+.....+...+....++++|
T Consensus        36 pGsGKTtl~l~~~~~~~~~g~----~v-lyIdtE~~~~~~r~~~lg~d~d~l~~~~~~~~~~~~~~~~~l~~~~~~~liV  110 (278)
T 3cmu_A           36 ESSGKTTLTLQVIAAAQREGK----TC-AFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIV  110 (278)
T ss_dssp             TTSSHHHHHHHHHHHHHTTTC----CE-EEECTTSCCCHHHHHHTTCCTTTCEEECCSSHHHHHHHHHHHHHHTCCSEEE
T ss_pred             CCCCCEEEEHHHHHHHHHCCC----EE-EEEEHHHCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEE
T ss_conf             778842420578887874487----46-8973221468155666177641103426880478999999997568966799


Q ss_pred             EEE
Q ss_conf             311
Q gi|254780570|r   88 LAG   90 (205)
Q Consensus        88 ~~g   90 (205)
                      .-.
T Consensus       111 IDS  113 (278)
T 3cmu_A          111 VDS  113 (278)
T ss_dssp             ESC
T ss_pred             ECC
T ss_conf             721


No 194
>>2o2z_A Hypothetical protein; NP_244435.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A (A:)
Probab=32.91  E-value=32  Score=14.87  Aligned_cols=32  Identities=31%  Similarity=0.771  Sum_probs=24.1

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             665999976985018999999973999847999997
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFS   38 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Vis   38 (205)
                      ++||++|  |+||.+..++...+.  ...+++.|++
T Consensus         4 ~~~iv~~--gGGtG~~~ll~gl~~--~~~~it~IV~   35 (323)
T 2o2z_A            4 KKNVIVF--GGGTGLSVLLRGLKT--FPVSITAIVT   35 (323)
T ss_dssp             CEEEEEE--ECSHHHHHHHHHHTT--SSEEEEEEEC
T ss_pred             CCCEEEE--CCCCCHHHHHHHHHH--CCCCEEEEEE
T ss_conf             6878998--784018999999974--8998499998


No 195
>>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} (A:180-307)
Probab=32.84  E-value=32  Score=14.86  Aligned_cols=74  Identities=8%  Similarity=-0.109  Sum_probs=36.2

Q ss_pred             HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHCC--CCC--EEECCCCCCCCCC
Q ss_conf             788899860895046301323322101243210001234303643112220572132106--654--2313532233324
Q gi|254780570|r   44 QGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLICLAGYMRLLSRDFVESY--KNK--ILNIHPSLLPLFP  119 (205)
Q Consensus        44 ~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv~~g~~~il~~~~l~~~--~~~--~iN~HpslLP~yr  119 (205)
                      ...+.|++.|+|+..-......-.+.....+-..=.--++|++++.|...  +......+  ..+  .||..|.-+..|+
T Consensus        31 ~l~~lae~~g~pv~~t~~~~g~~~~~hp~~~g~~g~~~~aDlil~iG~~~--~~~~~~~~~~~~~ii~Id~d~~~~~~~~  108 (128)
T 1efp_A           31 IIEELADKLGAAVGASRAAVDSGYAPNDWQVGQTGKVVAPELYVAVGISG--AIQHLAGMKDSKVIVAINKDEEAPIFQI  108 (128)
T ss_dssp             HHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSSSSBCCCCSEEEEESCCC--CHHHHTTTTTCSEEEEEESCTTCGGGGT
T ss_pred             HHHHHHHHHCCEEEECHHHCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEC--CHHHHCCCCCCCEEEEEECCCCCCCCCC
T ss_conf             99999998699478607650689999688647778502788999982322--6677547898987999768899986434


No 196
>>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} (A:199-372)
Probab=32.54  E-value=24  Score=15.73  Aligned_cols=70  Identities=10%  Similarity=-0.039  Sum_probs=35.1

Q ss_pred             HHHHHHHHHCCCCCCEEEEEE---ECCCCCHHHHHHHHCCCCEEEEECCCCCCCCC---H--------HHHHHHHCCCCC
Q ss_conf             899999997399984799999---76888878889986089504630132332210---1--------243210001234
Q gi|254780570|r   17 MLSLIQATKKNDYPAEIVGVF---SDNSNAQGLVKARKEKVPTFPIPYKDYISRRE---H--------EKAILMQLSSIQ   82 (205)
Q Consensus        17 l~~Il~~~~~~~~~~eI~~Vi---sn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~---~--------~~~l~~~l~~~~   82 (205)
                      ++.+++...+.+-   .+.++   +.+..+...+.|++.|+|+..-...+-.-.+.   |        .....+.++  +
T Consensus         6 i~~a~~~L~~Akr---Pvii~G~g~~~a~~~l~~lae~~~~pv~~t~~~kg~~~~~hp~~~G~~g~~~~~~~~~~l~--~   80 (174)
T 1ybh_A            6 LEQIVRLISESKK---PVLYVGGGCLNSSDELGRFVELTGIPVASTLMGLGSYPXDDELSLHMLGMHGTVYANYAVE--H   80 (174)
T ss_dssp             HHHHHHHHHHCSS---EEEEECGGGTTCHHHHHHHHHHHCCCEEECTTTTTSSCTTSTTEEEECSTTSCHHHHHHHH--H
T ss_pred             HHHHHHHHHCCCC---CEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH--C
T ss_conf             9999999970799---1999898624519999999998698999874247666840013200257768799986521--2


Q ss_pred             CEEEEEEEE
Q ss_conf             303643112
Q gi|254780570|r   83 PDLICLAGY   91 (205)
Q Consensus        83 ~Dliv~~g~   91 (205)
                      .|+|++.|.
T Consensus        81 aDlil~iG~   89 (174)
T 1ybh_A           81 SDLLLAFGV   89 (174)
T ss_dssp             CSEEEEESC
T ss_pred             CCEEEEECC
T ss_conf             899999698


No 197
>>2rgw_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, pyrimidine biosynthesis, thermostability; 2.80A {Methanococcus jannaschii} PDB: 3e2p_A (A:148-281)
Probab=32.35  E-value=32  Score=14.81  Aligned_cols=96  Identities=17%  Similarity=0.177  Sum_probs=53.8

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCC-CCEEEEEEE--CCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             66599997698-5018999999973999-847999997--6888878889986089504630132332210124321000
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDY-PAEIVGVFS--DNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL   78 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~-~~eI~~Vis--n~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l   78 (205)
                      .+||++.+-++ +.-+.+++....  .+ ++++.++.-  -.++...++.|++.|..+.....            +-+.+
T Consensus         4 glkia~iGd~~~~rv~~S~~~~~~--~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d------------~~ea~   69 (134)
T 2rgw_A            4 GIKIAFVGDLKYGRTVHSLVYALS--LFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKES------------LDDLD   69 (134)
T ss_dssp             SCEEEEESCTTTCHHHHHHHHHHT--TSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESS------------GGGCC
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHH--CCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCHH------------HHHHC
T ss_conf             776999705543325688899865--0574379996575457852321010012222111200------------12202


Q ss_pred             CCCCCEEEEEEEEE----------------EECCCHHHHCCCCCEEECCCCCCCCC
Q ss_conf             12343036431122----------------20572132106654231353223332
Q gi|254780570|r   79 SSIQPDLICLAGYM----------------RLLSRDFVESYKNKILNIHPSLLPLF  118 (205)
Q Consensus        79 ~~~~~Dliv~~g~~----------------~il~~~~l~~~~~~~iN~HpslLP~y  118 (205)
                      +  +.|+|..-.|-                ..+..+++++..  ++=+||  ||+.
T Consensus        70 ~--~aDviy~~~w~~~~~~~~~~~~~~~~~~~v~~~~l~k~~--~ivmH~--LPR~  119 (134)
T 2rgw_A           70 D--DIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKK--FIIMHP--LPRV  119 (134)
T ss_dssp             T--TCSEEEECCCCGGGCSSHHHHHHHHHHHCBCHHHHTTCS--CEEECC--SCCS
T ss_pred             C--CCEEEEECCEECCCCCCHHHHHHHHCHHHHHHHHHCCCC--CEEECC--CCCC
T ss_conf             1--316995013533778999999987320589999706999--899499--9998


No 198
>>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. oryzae KACC10331; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A (A:1-129,A:203-314)
Probab=32.14  E-value=21  Score=16.05  Aligned_cols=16  Identities=19%  Similarity=0.567  Sum_probs=14.0

Q ss_pred             CCCCEEEEEECCCCHH
Q ss_conf             9866599997698501
Q gi|254780570|r    1 MIRKNIVIFISGEGTN   16 (205)
Q Consensus         1 M~k~riavl~SG~Gsn   16 (205)
                      |.++|+|++++|.|+-
T Consensus         1 ~~~~~va~vFpGqG~q   16 (241)
T 3k89_A            1 MTESTLAFVFPGQGSQ   16 (241)
T ss_dssp             CEEEEEEEEECCTTCC
T ss_pred             CCCCCEEEEECCCHHH
T ss_conf             9989889993882562


No 199
>>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal- binding, pyrimidine biosynthesis, zinc; HET: FLC; 2.30A {Aquifex aeolicus} (B:125-271)
Probab=31.93  E-value=28  Score=15.24  Aligned_cols=21  Identities=24%  Similarity=0.452  Sum_probs=14.6

Q ss_pred             HCCCCCEEECCCCCCCCCCCCCC
Q ss_conf             10665423135322333244421
Q gi|254780570|r  101 ESYKNKILNIHPSLLPLFPGLHT  123 (205)
Q Consensus       101 ~~~~~~~iN~HpslLP~yrG~~~  123 (205)
                      +..+..++=+||  ||.+||.-.
T Consensus       115 ~~~~~~ai~mH~--LP~~rg~Ei  135 (147)
T 3d6n_B          115 ERFEKVKLYMHP--GPVNRNVDI  135 (147)
T ss_dssp             HHHTTCCCEECS--SCCCBTTTB
T ss_pred             HHCCCCCEEECC--CCCCCCCCC
T ss_conf             874889998279--999998866


No 200
>>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* (A:1-363)
Probab=31.79  E-value=33  Score=14.75  Aligned_cols=34  Identities=18%  Similarity=0.210  Sum_probs=15.8

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             9866599997698501899999997399984799999
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVF   37 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Vi   37 (205)
                      |.++||.|.+ |+|.-=..|++...+..  .++..+.
T Consensus        30 ~~~~~IlVTG-atGfiG~~lv~~Ll~~~--~~v~~~~   63 (363)
T 2q1s_A           30 LANTNVMVVG-GAGFVGSNLVKRLLELG--VNQVHVV   63 (363)
T ss_dssp             GTTCEEEEET-TTSHHHHHHHHHHHHTT--CSEEEEE
T ss_pred             CCCCEEEEEC-CCCHHHHHHHHHHHHCC--CCEEEEE
T ss_conf             3899899956-88889999999999779--9789999


No 201
>>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A* (A:706-942,A:1014-1055)
Probab=31.60  E-value=33  Score=14.73  Aligned_cols=80  Identities=18%  Similarity=0.096  Sum_probs=42.9

Q ss_pred             CCCC-H--HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEE
Q ss_conf             6985-0--189999999739998479999976888878889986089504630132332210124321000123430364
Q gi|254780570|r   11 SGEG-T--NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLIC   87 (205)
Q Consensus        11 SG~G-s--nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv   87 (205)
                      +|.| |  |++....++..+..     +++-+-+.+....++++.+...--+-.....+.+.....+...+....++++|
T Consensus        36 pGsGKT~lal~~~~~~~~~g~~-----viyIDtE~~~~~~r~~~lg~~~d~l~~~~~~~~~~~~~~~~~l~~~~~~~liV  110 (279)
T 3cmw_A           36 ESSGKTTLTLQVIAAAQREGKT-----CAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIV  110 (279)
T ss_dssp             TTSSHHHHHHHHHHHHHHTTCC-----EEEECTTSCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHHHTCCSEEE
T ss_pred             CCCCCEEEEHHHHHHHHHCCCE-----EEEECCCCCCCHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             8777267758876877731663-----45540333428778865277630204326437778999889873158603288


Q ss_pred             EEEEEEEC
Q ss_conf             31122205
Q gi|254780570|r   88 LAGYMRLL   95 (205)
Q Consensus        88 ~~g~~~il   95 (205)
                      .-......
T Consensus       111 IDSi~al~  118 (279)
T 3cmw_A          111 VDSVAALT  118 (279)
T ss_dssp             ESCSTTCC
T ss_pred             ECCHHHCC
T ss_conf             55444324


No 202
>>2ppv_A Uncharacterized protein; NP_764104.1, structural genomics, joint center for structural genomics, JCSG; 2.00A {Staphylococcus epidermidis atcc 12228} (A:)
Probab=31.51  E-value=33  Score=14.72  Aligned_cols=32  Identities=25%  Similarity=0.664  Sum_probs=24.0

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             665999976985018999999973999847999997
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFS   38 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Vis   38 (205)
                      ++||++|  |+||.+..++...+  .++.+++.|++
T Consensus         4 ~~~iv~l--~GGtG~~~ll~gl~--~~~~~lt~IV~   35 (332)
T 2ppv_A            4 QXNVVLI--GGGTGLSVLARGLR--EFPIDITAIVT   35 (332)
T ss_dssp             CEEEEEE--ECHHHHHHHHHHHT--TSSEEEEEEEC
T ss_pred             CCCEEEE--CCCHHHHHHHHHHH--HCCCCEEEEEE
T ss_conf             5748998--68020899999997--48998499998


No 203
>>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus HB8} (A:)
Probab=31.46  E-value=33  Score=14.71  Aligned_cols=81  Identities=14%  Similarity=0.046  Sum_probs=39.0

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHH----HHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             659999769850189999999739998479999976888878889----9860895046301323322101243210001
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVK----ARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~----a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      +++.-+++|.|+.+..+.+.      ..++.+|  + .+...++.    ++.+|++....-..    ...  ........
T Consensus        43 ~~vLD~GcG~G~~~~~~a~~------~~~v~~v--D-~s~~~l~~a~~~~~~~g~~~~~~~~~----~~~--~~~~~~~~  107 (171)
T 1ws6_A           43 GRFLDPFAGSGAVGLEAASE------GWEAVLV--E-KDPEAVRLLKENVRRTGLGARVVALP----VEV--FLPEAKAQ  107 (171)
T ss_dssp             CEEEEETCSSCHHHHHHHHT------TCEEEEE--C-CCHHHHHHHHHHHHHHTCCCEEECSC----HHH--HHHHHHHT
T ss_pred             CEEEEECCCHHHHHHHHHCC------CEEEEEE--E-CCHHHHHHHHHHHHHHCCCCCCHHHH----HHH--HCHHCCCC
T ss_conf             88998125211567754134------3024676--1-47678654556777522222100001----221--00000256


Q ss_pred             CCCCEEEEEEE-EEEECCCHH
Q ss_conf             23430364311-222057213
Q gi|254780570|r   80 SIQPDLICLAG-YMRLLSRDF   99 (205)
Q Consensus        80 ~~~~Dliv~~g-~~~il~~~~   99 (205)
                      ....|+|++.. |...-++..
T Consensus       108 ~~~fD~v~~~~~~~~~~~~~~  128 (171)
T 1ws6_A          108 GERFTVAFXAPPYAXDLAALF  128 (171)
T ss_dssp             TCCEEEEEECCCTTSCTTHHH
T ss_pred             CCCCCEEEECCCCCCCHHHHH
T ss_conf             776420577576445879999


No 204
>>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} (A:1-111,A:215-236)
Probab=31.22  E-value=34  Score=14.69  Aligned_cols=34  Identities=18%  Similarity=0.144  Sum_probs=20.9

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             65999976985018999999973999847999997688
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      .|+++.  |.|.-...+.....+.  +.+++.|+..++
T Consensus         1 lkVgiI--G~G~~g~~~~~~l~~~--~~eivav~d~~~   34 (133)
T 2dc1_A            1 MLVGLI--GYGAIGKFLAEWLERN--GFEIAAILDVRG   34 (133)
T ss_dssp             CEEEEE--CCSHHHHHHHHHHHHT--TCEEEEEECSSC
T ss_pred             CEEEEE--CCCHHHHHHHHHHHHC--CCEEEEEEECCC
T ss_conf             989999--7888999999999719--988999997896


No 205
>>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} (A:1-204)
Probab=30.79  E-value=34  Score=14.64  Aligned_cols=30  Identities=3%  Similarity=-0.052  Sum_probs=17.4

Q ss_pred             CCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             186626778998718998999999999999
Q gi|254780570|r  146 MDEGPIIAQAAVPVSSQDTESSLSQKVLSA  175 (205)
Q Consensus       146 ~D~G~Ii~q~~~~i~~~d~~~~l~~rv~~~  175 (205)
                      ....+-...+.+-|..++++.+..++....
T Consensus       159 ~~~~~~~~~~v~vigg~~ta~e~~~~~~~~  188 (204)
T 1f0y_A          159 FFNPVPVMKLVEVIKTPMTSQKTFESLVDF  188 (204)
T ss_dssp             ECSSTTTCCEEEEECCTTCCHHHHHHHHHH
T ss_pred             CCCHHHHCCCEEECCCCCCCHHHHHHHHHH
T ss_conf             443243234202137866548899999999


No 206
>>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} (A:1-116)
Probab=30.77  E-value=34  Score=14.64  Aligned_cols=51  Identities=12%  Similarity=0.070  Sum_probs=29.8

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEE
Q ss_conf             66599997698501899999997399984799999768888788899860895046
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFP   58 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~   58 (205)
                      .+|++|+.-| +|.+-++-+...+.  +++|.  ++|.....-.+...+.+++++.
T Consensus        18 ~~~v~viGlG-~sG~salA~~L~~~--G~~V~--~~D~~~~~~~~~~~~~g~~~~~   68 (116)
T 1p3d_A           18 VQQIHFIGIG-GAGXSGIAEILLNE--GYQIS--GSDIADGVVTQRLAQAGAKIYI   68 (116)
T ss_dssp             CCEEEEETTT-STTHHHHHHHHHHH--TCEEE--EEESCCSHHHHHHHHTTCEEEE
T ss_pred             CCEEEEEEEC-HHHHHHHHHHHHHC--CCEEE--EEECCCCHHHHHHHHCCCEEEC
T ss_conf             7789999966-99999999999978--89399--9928999799999978799987


No 207
>>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic acid, AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} (A:214-513)
Probab=30.70  E-value=34  Score=14.63  Aligned_cols=55  Identities=9%  Similarity=0.089  Sum_probs=31.9

Q ss_pred             CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEEC---CCCC-HHHHHHHHCCCCEEEEECC
Q ss_conf             66599997698-50-189999999739998479999976---8888-7888998608950463013
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSD---NSNA-QGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn---~~da-~~l~~a~~~~Ip~~~i~~~   62 (205)
                      ..+++++.||+ .| .+.+++.... +    ++.++..+   ..+. ..-+.|+..|++...+...
T Consensus        28 ~~~v~v~lSGGlDSs~ia~ll~~~~-~----~~~~~t~~~~~~~e~~~a~~va~~lg~~~~~~~~~   88 (300)
T 1jgt_A           28 GDTPLVVLSGGIDSSGVAACAHRAA-G----ELDTVSMGTDTSNEFREARAVVDHLRTRHREITIP   88 (300)
T ss_dssp             TCCCEEECCSSHHHHHHHHHHHHHH-S----SCEEEEEECSSCCCHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCCEEECCCCCCHHHHHHHHHHCC-C----CCCEEECCCCCCCHHHHHHHHHHHHHCCEEEEECC
T ss_conf             8886697479853399999876303-4----43235224445764778999987741250799739


No 208
>>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiamine diphosphate; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* (A:192-368)
Probab=30.67  E-value=28  Score=15.26  Aligned_cols=74  Identities=18%  Similarity=0.134  Sum_probs=38.2

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEEE---CCCCC--HHHHHHHHCCCCEEEEECCCCCCCCC---HHHHHHHHCCCCCCEEE
Q ss_conf             018999999973999847999997---68888--78889986089504630132332210---12432100012343036
Q gi|254780570|r   15 TNMLSLIQATKKNDYPAEIVGVFS---DNSNA--QGLVKARKEKVPTFPIPYKDYISRRE---HEKAILMQLSSIQPDLI   86 (205)
Q Consensus        15 snl~~Il~~~~~~~~~~eI~~Vis---n~~da--~~l~~a~~~~Ip~~~i~~~~~~~~~~---~~~~l~~~l~~~~~Dli   86 (205)
                      ..++.+.+..++-+-   .+.++-   .+.++  ...+.+++.|+|++.-......-.+.   |-......+ -.++|+|
T Consensus         8 ~~i~~~~~~L~~A~r---Pvii~G~~~~~~~a~~~l~~lae~~g~Pv~~~~~~k~~~~~~~p~~~g~~~~~~-l~~aDli   83 (177)
T 2q28_A            8 KSVTSAISLLAKAER---PLIILGKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFA-LANADVV   83 (177)
T ss_dssp             HHHHHHHHHHHHCSS---EEEEECHHHHHHTCHHHHHHHHHHHTCCEEECGGGTTSSCTTCTTBCGGGHHHH-HHHCSEE
T ss_pred             HHHHHHHHHHHCCCC---CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH-HCCCCCC
T ss_conf             999999987653369---879995353332579999999753258752211113456666864335440212-0320002


Q ss_pred             EEEEEE
Q ss_conf             431122
Q gi|254780570|r   87 CLAGYM   92 (205)
Q Consensus        87 v~~g~~   92 (205)
                      ++.|..
T Consensus        84 i~iG~~   89 (177)
T 2q28_A           84 MLVGAR   89 (177)
T ss_dssp             EEESCC
T ss_pred             CCCCCC
T ss_conf             222343


No 209
>>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli} (A:706-942,A:1014-1054)
Probab=30.66  E-value=34  Score=14.62  Aligned_cols=75  Identities=17%  Similarity=0.107  Sum_probs=38.6

Q ss_pred             CCCC-H--HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEE
Q ss_conf             6985-0--189999999739998479999976888878889986089504630132332210124321000123430364
Q gi|254780570|r   11 SGEG-T--NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLIC   87 (205)
Q Consensus        11 SG~G-s--nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv   87 (205)
                      +|.| |  +++....++..+.    . +++-+-+.+.--.++++.+....-+-.....+.++..+.+...+....++++|
T Consensus        36 pGsGKTtl~l~~~~~~~~~g~----~-viyidtE~~~~~~r~~~lg~~~d~l~~~~~~~~~~~~~~~~~l~~~~~~~liV  110 (278)
T 3cmu_A           36 ESSGKTTLTLQVIAAAQREGK----T-CAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIV  110 (278)
T ss_dssp             TTSSHHHHHHHHHHHHHTTTC----C-EEEECTTSCCCHHHHHHTTCCTTTCEEECCSSHHHHHHHHHHHHHHTCCSEEE
T ss_pred             CCCCCHHHHHHHHHHHHHCCC----E-EEECCHHHCCCHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             877703668987655553155----0-12004342128888976296245411568952899999999985356643278


Q ss_pred             EEE
Q ss_conf             311
Q gi|254780570|r   88 LAG   90 (205)
Q Consensus        88 ~~g   90 (205)
                      .-.
T Consensus       111 IDS  113 (278)
T 3cmu_A          111 VDS  113 (278)
T ss_dssp             ESC
T ss_pred             ECC
T ss_conf             542


No 210
>>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A* (A:113-272)
Probab=30.50  E-value=35  Score=14.61  Aligned_cols=41  Identities=17%  Similarity=0.274  Sum_probs=29.3

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCCCC
Q ss_conf             665999976985-01899999997399984799999768888
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNSNA   43 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~da   43 (205)
                      .++++.++.|.| +-+.++++.........++.++.+++...
T Consensus         8 ~~~ivliagGtGItP~~sil~~l~~~~~~~~v~l~~~~r~~~   49 (160)
T 2bgi_A            8 GKRLWFLATGTGIAPFASLMREPEAYEKFDEVIMMHACRTVA   49 (160)
T ss_dssp             CSEEEEEEEGGGGHHHHHHTTCGGGGTSCSEEEEEEEESSSG
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHH
T ss_conf             654047862677641558888776416751699999618789


No 211
>>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, cytoplasm, oxidoreductase, phospholipid biosynthesis, structural genomics; HET: EPE; 2.10A {Coxiella burnetii rsa 493} (A:1-204)
Probab=30.43  E-value=35  Score=14.60  Aligned_cols=48  Identities=15%  Similarity=0.205  Sum_probs=24.0

Q ss_pred             CCCCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCE
Q ss_conf             9866599997698-5018999999973999847999997688887888998608950
Q gi|254780570|r    1 MIRKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPT   56 (205)
Q Consensus         1 M~k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~   56 (205)
                      |.++||+|+.+|. |+.+-..+   .+.  .++|.+  .++. ....+..+..+.+.
T Consensus        27 ~~~~kI~iIGaG~mG~~iA~~L---~~~--G~~V~~--~~r~-~~~~~~~~~~~~~~   75 (204)
T 3k96_A           27 PFKHPIAILGAGSWGTALALVL---ARK--GQKVRL--WSYE-SDHVDEMQAEGVNN   75 (204)
T ss_dssp             CCCSCEEEECCSHHHHHHHHHH---HTT--TCCEEE--ECSC-HHHHHHHHHHSSBT
T ss_pred             CCCCEEEEECCCHHHHHHHHHH---HHC--CCEEEE--EEEC-HHHHHHHHHCCCCC
T ss_conf             7898899989599999999999---978--997899--9828-99999999739887


No 212
>>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Pyrococcus horikoshii OT3} (A:1-129)
Probab=29.69  E-value=36  Score=14.51  Aligned_cols=59  Identities=19%  Similarity=0.149  Sum_probs=33.6

Q ss_pred             CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECCCCC----HHHHHHHHCCCCEEEEECCCC
Q ss_conf             66599997698-50-1899999997399984799999768888----788899860895046301323
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDNSNA----QGLVKARKEKVPTFPIPYKDY   64 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~~da----~~l~~a~~~~Ip~~~i~~~~~   64 (205)
                      +.|+++.+||+ .| .+..++....   .+..+..+-.+....    ...+.|++.|++.+.++..+.
T Consensus        22 ~~~v~v~~SGG~DS~~~~~ll~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~   86 (129)
T 2e18_A           22 NNGVVIGISGGVDSATVAYLATKAL---GKEKVLGLIMPYFENKDVEDAKLVAEKLGIGYKVINIKPI   86 (129)
T ss_dssp             TTCEEEECCSSHHHHHHHHHHHHHH---CGGGEEEEECCSSCSTHHHHHHHHHHHHTCEEEECCCHHH
T ss_pred             CCCEEEECCCCHHHHHHHHHHHHHC---CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf             9969997887799999999999845---7816677621455530037899999874556332333268


No 213
>>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} (A:)
Probab=29.64  E-value=36  Score=14.51  Aligned_cols=37  Identities=11%  Similarity=0.136  Sum_probs=24.7

Q ss_pred             CCEEEEEECCCCHHHH--HHHHHHHCCCCCCEEEEEEECC
Q ss_conf             6659999769850189--9999997399984799999768
Q gi|254780570|r    3 RKNIVIFISGEGTNML--SLIQATKKNDYPAEIVGVFSDN   40 (205)
Q Consensus         3 k~riavl~SG~Gsnl~--~Il~~~~~~~~~~eI~~Visn~   40 (205)
                      ++|+++.+||.++..+  .++++.... ...++.+|+|..
T Consensus        19 ~k~ill~itGs~~~~~~~~~i~~L~~~-~~~~v~vi~t~~   57 (206)
T 1qzu_A           19 KFHVLVGVTGSVAALKLPLLVSKLLDI-PGLEVAVVTTER   57 (206)
T ss_dssp             SEEEEEEECSSGGGGTHHHHHHHHC----CEEEEEEECTG
T ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHH-CCCEEEEEECHH
T ss_conf             866999971489999899999998734-598899997869


No 214
>>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} (A:1-122)
Probab=29.45  E-value=34  Score=14.66  Aligned_cols=65  Identities=11%  Similarity=0.108  Sum_probs=30.7

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             66599997698-50189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      +.|+++.  |- |.--+..+.+.++-. .++++.|.. +.. .    ++.++++.+.       +       +-+.+...
T Consensus         7 ~iri~ii--G~gg~~g~~~~~~~~~~~-~~~i~~v~~-~~~-~----~~~~~~~~~~-------~-------~~~~~~~~   63 (122)
T 1oi7_A            7 ETRVLVQ--GITGREGQFHTKQMLTYG-TKIVAGVTP-GKG-G----MEVLGVPVYD-------T-------VKEAVAHH   63 (122)
T ss_dssp             TCEEEEE--TTTSHHHHHHHHHHHHHT-CEEEEEECT-TCT-T----CEETTEEEES-------S-------HHHHHHHS
T ss_pred             CCEEEEE--CCCCCHHHHHHHHHHHHC-CCEEEEECC-CCC-C----CEEECCCCCC-------C-------HHHHHCCC
T ss_conf             9849998--998858789999999809-957998648-988-6----3787920347-------4-------67743467


Q ss_pred             CCEEEEEEE
Q ss_conf             430364311
Q gi|254780570|r   82 QPDLICLAG   90 (205)
Q Consensus        82 ~~Dliv~~g   90 (205)
                      ++|+++.+.
T Consensus        64 ~vD~v~i~t   72 (122)
T 1oi7_A           64 EVDASIIFV   72 (122)
T ss_dssp             CCSEEEECC
T ss_pred             CCCEEEEEC
T ss_conf             876799962


No 215
>>2hma_A Probable tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae} (A:1-199)
Probab=29.23  E-value=36  Score=14.46  Aligned_cols=55  Identities=16%  Similarity=0.380  Sum_probs=32.9

Q ss_pred             CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECCC-------------C-CHHHHHHHHCCCCEEEEECC
Q ss_conf             66599997698-50-18999999973999847999997688-------------8-87888998608950463013
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDNS-------------N-AQGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~~-------------d-a~~l~~a~~~~Ip~~~i~~~   62 (205)
                      .+|++|.+||+ .| .+..++..     ...++..+..+.-             + ....+.|++.++|..+++..
T Consensus         9 ~~kvvv~~SGG~DS~v~l~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~v~~~~   79 (199)
T 2hma_A            9 KTRVVVGXSGGVDSSVTALLLKE-----QGYDVIGIFXKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVNFE   79 (199)
T ss_dssp             GSEEEEECCSSHHHHHHHHHHHH-----TTCEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEECH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf             78799993686999999999987-----699579999988767777887773777999999999859978997036


No 216
>>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} (A:109-229)
Probab=29.20  E-value=36  Score=14.46  Aligned_cols=88  Identities=11%  Similarity=0.160  Sum_probs=43.9

Q ss_pred             CEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCCCCHH--HH----HHHHCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf             65999976985-0189999999739998479999976888878--88----99860895046301323322101243210
Q gi|254780570|r    4 KNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNSNAQG--LV----KARKEKVPTFPIPYKDYISRREHEKAILM   76 (205)
Q Consensus         4 ~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~da~~--l~----~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~   76 (205)
                      +++++++.|.| +-+.++++....+. ..++.++.+++.....  .+    .++..+..+.....     ++.....+.+
T Consensus         4 ~~~i~iagG~GiaP~~s~l~~~~~~~-~~~v~l~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~   77 (121)
T 2pia_A            4 KSFILVAGGIGITPMLSMARQLRAEG-LRSFRLYYLTRDPEGTAFFDELTSDEWRSDVKIHHDHG-----DPTKAFDFWS   77 (121)
T ss_dssp             SEEEEEEEGGGHHHHHHHHHHHHHHC-SSEEEEEEEESCGGGCTTHHHHHSTTTTTTEEEEECTT-----CTTSCCCHHH
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHC-CCCCEEEEECCCHHHHHCHHHHHHHCCCCCEEEEEECC-----CCCCCCCCCC
T ss_conf             40899982577760899999998721-47725898324677752899998531247336764046-----7654311213


Q ss_pred             HCCCCCCE-EEEEEEEEEECCCHHHHC
Q ss_conf             00123430-364311222057213210
Q gi|254780570|r   77 QLSSIQPD-LICLAGYMRLLSRDFVES  102 (205)
Q Consensus        77 ~l~~~~~D-liv~~g~~~il~~~~l~~  102 (205)
                      .+.+...| .+.++|     |+.++..
T Consensus        78 ~~~~~~~~~~v~vCG-----p~~m~~~   99 (121)
T 2pia_A           78 VFEKSKPAQHVYCCG-----PQALMDT   99 (121)
T ss_dssp             HHSSCCTTEEEEEES-----CHHHHHH
T ss_pred             CCCCCCCCCEEEEEC-----CHHHHHH
T ss_conf             224678755799945-----4788999


No 217
>>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} (A:1-256,A:463-482)
Probab=28.93  E-value=37  Score=14.43  Aligned_cols=19  Identities=11%  Similarity=0.186  Sum_probs=10.7

Q ss_pred             EEEECCCCCCHHHHHHHHH
Q ss_conf             9987189989999999999
Q gi|254780570|r  155 AAVPVSSQDTESSLSQKVL  173 (205)
Q Consensus       155 ~~~~i~~~d~~~~l~~rv~  173 (205)
                      ...+|..+.++-.|.+-+.
T Consensus       251 ~V~pVG~~~~~~~~~~~~~  269 (276)
T 2pq6_A          251 SIYPIGGGCSYMNLNKVIK  269 (276)
T ss_dssp             TEEECCTCHHHHHHHHHHH
T ss_pred             EECCCCCCCHHHHHHHHHH
T ss_conf             0201459958999999999


No 218
>>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} (A:206-338)
Probab=28.74  E-value=37  Score=14.41  Aligned_cols=40  Identities=18%  Similarity=0.406  Sum_probs=29.6

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf             665999976985-0189999999739998479999976888
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNSN   42 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~d   42 (205)
                      .+++++++.|.| +-+.++++.........++.++.+++..
T Consensus         5 ~~~lilia~G~GiaP~~s~l~~~~~~~~~~~i~l~~~~r~~   45 (133)
T 1krh_A            5 KRPVLMLAGGTGIAPFLSMLQVLEQKGSEHPVRLVFGVTQD   45 (133)
T ss_dssp             SSCEEEEEEGGGHHHHHHHHHHHHHHCCSSCEEEEEEESSG
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCH
T ss_conf             56249997988755599999999861445623798714898


No 219
>>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics; 2.01A {Thermus thermophilus HB8} (A:1-147,A:317-345)
Probab=28.11  E-value=38  Score=14.33  Aligned_cols=39  Identities=18%  Similarity=0.063  Sum_probs=21.6

Q ss_pred             CCC-CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             986-65999976985018999999973999847999997688
Q gi|254780570|r    1 MIR-KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         1 M~k-~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      |.+ .|++|+.. +|.-=..+++...+ .-.+++..+.+.+.
T Consensus         1 Ms~~~kV~IvGA-tG~vG~~l~~~L~~-~p~~ei~~l~~~~~   40 (176)
T 2ozp_A            1 MTGKKTLSIVGA-SGYAGGEFLRLALS-HPYLEVKQVTSRRF   40 (176)
T ss_dssp             ---CEEEEEETT-TSHHHHHHHHHHHT-CTTEEEEEEBCSTT
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHH-CCCCEEEEEECCCC
T ss_conf             999988999893-61999999999980-99967999981687


No 220
>>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} (A:349-566)
Probab=28.11  E-value=26  Score=15.46  Aligned_cols=20  Identities=25%  Similarity=0.463  Sum_probs=9.5

Q ss_pred             CCEEEEEEEECCCCCCHHHHHH
Q ss_conf             6267789987189989999999
Q gi|254780570|r  149 GPIIAQAAVPVSSQDTESSLSQ  170 (205)
Q Consensus       149 G~Ii~q~~~~i~~~d~~~~l~~  170 (205)
                      ||.+.  .+.+++.+.......
T Consensus       175 gp~li--ev~~~~~~~~~~~~~  194 (218)
T 2vbi_A          175 GPTLI--ECQIDRTDCTDMLVQ  194 (218)
T ss_dssp             SCEEE--EEECCTTCCCHHHHH
T ss_pred             CEEEE--EEEECCHHCCHHHHH
T ss_conf             74999--999871326843355


No 221
>>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum ms-1} (A:1-130,A:276-315)
Probab=28.02  E-value=38  Score=14.32  Aligned_cols=120  Identities=17%  Similarity=0.149  Sum_probs=55.6

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHC--CCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             66599997698-501899999997399984799999768888788899860--895046301323322101243210001
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKE--KVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~--~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      +.|+++...|. |+.   .+.++... -+++++.+.+-++     ++++..  +.+.+              ..+-+.+.
T Consensus        10 ~lrvgIIG~G~~g~~---~~~~l~~~-~~~~ivai~d~~~-----~~~~~~~~~~~~~--------------~d~eell~   66 (170)
T 3c1a_A           10 PVRLALIGAGRWGKN---YIRTIAGL-PGAALVRLASSNP-----DNLALVPPGCVIE--------------SDWRSVVS   66 (170)
T ss_dssp             CEEEEEEECTTTTTT---HHHHHHHC-TTEEEEEEEESCH-----HHHTTCCTTCEEE--------------SSTHHHHT
T ss_pred             CEEEEEECCCHHHHH---HHHHHHHC-CCCEEEEEECCCH-----HHHHHHCCCCCCC--------------CCHHHHHH
T ss_conf             818999999789999---99999708-9928999987999-----9999752478623--------------88999971


Q ss_pred             CCCCEEEEEEEEEEECCCHHHHCCCC--CEEECCCCCCCCCCCCCCC-CCHHCCCCCCCCCCEEEECCCCCCCCE
Q ss_conf             23430364311222057213210665--4231353223332444212-100002465344530331232186626
Q gi|254780570|r   80 SIQPDLICLAGYMRLLSRDFVESYKN--KILNIHPSLLPLFPGLHTH-RRVLQSGIKITGCTVHMVTANMDEGPI  151 (205)
Q Consensus        80 ~~~~Dliv~~g~~~il~~~~l~~~~~--~~iN~HpslLP~yrG~~~~-~~ai~~g~~~~G~TiH~v~~~~D~G~I  151 (205)
                      +.++|+++.+.-...-.+......+.  .++==.|.      +.++- -+.+..-.+..|+.++..-..-|..|.
T Consensus        67 ~~~iD~VvIatp~~~H~e~a~~al~aGkhVl~EKPl------a~~~ee~~eL~~~a~~~g~~v~V~~~~R~~~~~  135 (170)
T 3c1a_A           67 APEVEAVIIATPPATHAEITLAAIASGKAVLVEKPL------TLDLAEAEAVAAAAKATGVXVWVEHTQLDEXPL  135 (170)
T ss_dssp             CTTCCEEEEESCGGGHHHHHHHHHHTTCEEEEESSS------CSCHHHHHHHHHHHHHHCCCEEEECGGGCCCHH
T ss_pred             CCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCCCC------CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf             746441001233001223210000233110125453------211122332012332034333223322365699


No 222
>>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.70A {Archaeoglobus fulgidus} (A:)
Probab=27.99  E-value=38  Score=14.32  Aligned_cols=73  Identities=8%  Similarity=0.122  Sum_probs=40.0

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             86659999769850189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      .+++++|+  |.|.--..+.+.....  .++|.. +..+|  ...+.++..+..++..+..+        .+.++...-.
T Consensus         5 ~~~~v~Ii--G~G~iG~~ia~~L~~~--G~~V~v-id~~~--~~~~~~~~~~~~~~~~d~~~--------~~~l~~~~~~   69 (141)
T 3llv_A            5 GRYEYIVI--GSEAAGVGLVRELTAA--GKKVLA-VDKSK--EKIELLEDEGFDAVIADPTD--------ESFYRSLDLE   69 (141)
T ss_dssp             -CCSEEEE--CCSHHHHHHHHHHHHT--TCCEEE-EESCH--HHHHHHHHTTCEEEECCTTC--------HHHHHHSCCT
T ss_pred             CCCCEEEE--CCCHHHHHHHHHHHHC--CCCEEE-EECHH--HHHHHHHCCCCEEEEECCCC--------HHHHHHHHHH
T ss_conf             87969998--9988999999999987--993899-74338--89999870783799944543--------5677655575


Q ss_pred             CCEEEEEE
Q ss_conf             43036431
Q gi|254780570|r   82 QPDLICLA   89 (205)
Q Consensus        82 ~~Dliv~~   89 (205)
                      ++|.++.+
T Consensus        70 ~~d~vi~~   77 (141)
T 3llv_A           70 GVSAVLIT   77 (141)
T ss_dssp             TCSEEEEC
T ss_pred             HCCEEEEE
T ss_conf             26899998


No 223
>>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} (A:1-130)
Probab=27.82  E-value=37  Score=14.44  Aligned_cols=65  Identities=8%  Similarity=-0.013  Sum_probs=29.2

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      +.|+++.+-| |..-...+.+.... -..+++.|.. + +..    ++..++|.+.       +       +.+.+...+
T Consensus        14 ~~rvaiiG~g-g~~~~~~~~~l~~~-~~~~i~~v~~-~-~~~----~~~~~~~~y~-------~-------~~~~~~~~~   71 (130)
T 2fp4_A           14 NTKVICQGFT-GKQGTFHSQQALEY-GTNLVGGTTP-G-KGG----KTHLGLPVFN-------T-------VKEAKEQTG   71 (130)
T ss_dssp             TCEEEEETTT-SHHHHHHHHHHHHH-TCEEEEEECT-T-CTT----CEETTEEEES-------S-------HHHHHHHHC
T ss_pred             CCEEEEECCC-CCHHHHHHHHHHHH-CCCEEEEECC-C-CCC----CEEECCCHHH-------H-------HHHHHHCCC
T ss_conf             9869998898-84645999999984-8957987479-9-787----1443730074-------5-------999974124


Q ss_pred             CEEEEEE
Q ss_conf             3036431
Q gi|254780570|r   83 PDLICLA   89 (205)
Q Consensus        83 ~Dliv~~   89 (205)
                      +|+++.+
T Consensus        72 vD~V~i~   78 (130)
T 2fp4_A           72 ATASVIY   78 (130)
T ss_dssp             CCEEEEC
T ss_pred             CCEEEEC
T ss_conf             3057631


No 224
>>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} (A:120-236)
Probab=27.53  E-value=39  Score=14.26  Aligned_cols=46  Identities=15%  Similarity=0.130  Sum_probs=24.2

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHH
Q ss_conf             986659999769850189999999739998479999976888878889986
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARK   51 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~   51 (205)
                      |-.+|++|+  |.|.-.+++..+....... +|  ++.||.....-+.+++
T Consensus         1 l~~k~vli~--GaGg~a~ai~~~L~~~g~~-~i--~I~~R~~~~a~~l~~~   46 (117)
T 3fbt_A            1 IKNNICVVL--GSGGAARAVLQYLKDNFAK-DI--YVVTRNPEKTSEIYGE   46 (117)
T ss_dssp             CTTSEEEEE--CSSTTHHHHHHHHHHTTCS-EE--EEEESCHHHHHHHCTT
T ss_pred             CCCCEEEEE--CCCCHHHHHHHHHHHCCCC-EE--EEEECCHHHHHHHHHH
T ss_conf             566523554--2563222233334415552-69--9874003566766745


No 225
>>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} (A:)
Probab=27.33  E-value=39  Score=14.24  Aligned_cols=82  Identities=7%  Similarity=-0.033  Sum_probs=34.0

Q ss_pred             EEEECCCCHHH-HHHHHHHHCCCCCCEEEEEEECCCCCHH---HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC-
Q ss_conf             99976985018-9999999739998479999976888878---889986089504630132332210124321000123-
Q gi|254780570|r    7 VIFISGEGTNM-LSLIQATKKNDYPAEIVGVFSDNSNAQG---LVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI-   81 (205)
Q Consensus         7 avl~SG~Gsnl-~~Il~~~~~~~~~~eI~~Visn~~da~~---l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~-   81 (205)
                      .+|+.|.+|.+ +++.+.+.+.  .++|+  ++++.....   .+...+.+-... +...+..+.+...+.+.+.+.+. 
T Consensus         3 ~~lITGassGIG~aiA~~la~~--Ga~Vi--~~~r~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   77 (244)
T 1zmo_A            3 IALVTHARHFAGPAAVEALTQD--GYTVV--CHDASFADAAERQRFESENPGTIA-LAEQKPERLVDATLQHGEAIDTIV   77 (244)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHT--TCEEE--ECCGGGGSHHHHHHHHHHSTTEEE-CCCCCGGGHHHHHGGGSSCEEEEE
T ss_pred             EEEECCCCCHHHHHHHHHHHHC--CCEEE--EEECCHHHHHHHHHHHHHCCCCEE-EEHHHHHHHHHHHHHHCCCCCEEE
T ss_conf             9999183538999999999986--99999--997985889999998622478189-548999999999999759986898


Q ss_pred             -CCEEEEEEEEEE
Q ss_conf             -430364311222
Q gi|254780570|r   82 -QPDLICLAGYMR   93 (205)
Q Consensus        82 -~~Dliv~~g~~~   93 (205)
                       ..|+++.+++..
T Consensus        78 ~~~~~i~n~~~~~   90 (244)
T 1zmo_A           78 SNDYIPRPMNRLP   90 (244)
T ss_dssp             ECCCCCTTGGGCC
T ss_pred             ECCEECCCCCCCC
T ss_conf             5663048767688


No 226
>>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} (A:1-78,A:260-280)
Probab=27.15  E-value=37  Score=14.39  Aligned_cols=74  Identities=9%  Similarity=0.076  Sum_probs=41.2

Q ss_pred             EEEECCC--CC-HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEE--EEEEEE-ECCCHHHHCCCCCEE
Q ss_conf             9997688--88-78889986089504630132332210124321000123430364--311222-057213210665423
Q gi|254780570|r   35 GVFSDNS--NA-QGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLIC--LAGYMR-LLSRDFVESYKNKIL  108 (205)
Q Consensus        35 ~Visn~~--da-~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv--~~g~~~-il~~~~l~~~~~~~i  108 (205)
                      +++.++.  +. --++.+++.|+++..++-++....-....   ..  ....|+++  +.++.| +-...+++.+...++
T Consensus         3 ~ilYdriR~EEKlLi~al~~rGv~v~~I~~~~~~~~l~~~~---~~--~~~~DVvL~R~vSh~Ral~~a~~lEs~GvpvV   77 (99)
T 1uc8_A            3 AILYDRIRPDERMLFERAEALGLPYKKVYVPALPMVLGERP---KE--LEGVTVALERCVSQSRGLAAARYLTALGIPVV   77 (99)
T ss_dssp             EEEESSCCHHHHHHHHHHHHHTCCEEEEEGGGCCEETTBCC---GG--GTTCCEEEECCSSHHHHHHHHHHHHHTTCCEE
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCC---CC--CCCCCEEEEEECCCCCCHHHHHHHHHCCCEEE
T ss_conf             99955898899999999997699799995896512257764---32--10342899984145300798888997898396


Q ss_pred             ECCCC
Q ss_conf             13532
Q gi|254780570|r  109 NIHPS  113 (205)
Q Consensus       109 N~Hps  113 (205)
                      |.|..
T Consensus        78 N~~~~   82 (99)
T 1uc8_A           78 NVHTT   82 (99)
T ss_dssp             SHHHH
T ss_pred             CHHHH
T ss_conf             99887


No 227
>>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A* (A:361-593,A:665-705)
Probab=26.50  E-value=40  Score=14.14  Aligned_cols=75  Identities=17%  Similarity=0.110  Sum_probs=40.3

Q ss_pred             CCCC-H--HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEE
Q ss_conf             6985-0--189999999739998479999976888878889986089504630132332210124321000123430364
Q gi|254780570|r   11 SGEG-T--NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLIC   87 (205)
Q Consensus        11 SG~G-s--nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv   87 (205)
                      +|.| |  ||+....++..+..    + ++-+-+.+..-.++++.++..--+-.....+-+.....+.+.+.+..++++|
T Consensus        32 pGsGKTtL~Lql~~~~~~~g~~----v-lyIdtE~~~~~~r~~~lg~~~d~l~~~~~~~~~~~~~~i~~l~~~~~~~liV  106 (274)
T 3cmw_A           32 ESSGKTTLTLQVIAAAQREGKT----C-AFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIV  106 (274)
T ss_dssp             TTSSHHHHHHHHHHHHHHTTCC----E-EEECTTSCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHHHTCCSEEE
T ss_pred             CCCCCHHHHHHHHHHHHHCCCE----E-EEECHHHCCCHHHHHHHCCCHHHHEECCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf             8778102479988888865884----8-9942121149899998098747750008970788999999886437716999


Q ss_pred             EEE
Q ss_conf             311
Q gi|254780570|r   88 LAG   90 (205)
Q Consensus        88 ~~g   90 (205)
                      .-.
T Consensus       107 IDS  109 (274)
T 3cmw_A          107 VDS  109 (274)
T ss_dssp             ESC
T ss_pred             ECH
T ss_conf             700


No 228
>>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S, lyase; HET: FMN; 2.00A {Arabidopsis thaliana} (A:)
Probab=26.16  E-value=41  Score=14.10  Aligned_cols=35  Identities=17%  Similarity=0.259  Sum_probs=26.0

Q ss_pred             CCEEEEEECCCCHHHH--HHHHHHHCCCCCCEEEEEEECC
Q ss_conf             6659999769850189--9999997399984799999768
Q gi|254780570|r    3 RKNIVIFISGEGTNML--SLIQATKKNDYPAEIVGVFSDN   40 (205)
Q Consensus         3 k~riavl~SG~Gsnl~--~Il~~~~~~~~~~eI~~Visn~   40 (205)
                      ++|+.+.++|.++..+  .+++..++   .++|..|+|..
T Consensus        19 ~k~ill~vtGs~~~~~~~~ll~~L~~---~~~V~vv~T~~   55 (209)
T 1mvl_A           19 KPRVLLAASGSVAAIKFGNLCHCFTE---WAEVRAVVTKS   55 (209)
T ss_dssp             CCEEEEEECSSGGGGGHHHHHHHHHT---TSEEEEEECTG
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHHHC---CCEEEEEECHH
T ss_conf             98699998269999999999999862---78799998578


No 229
>>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170} (A:124-242)
Probab=26.01  E-value=41  Score=14.08  Aligned_cols=72  Identities=7%  Similarity=-0.052  Sum_probs=39.5

Q ss_pred             HHHHHHHHCCCCCCEEEEEEECCCCCH-----HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEE
Q ss_conf             999999973999847999997688887-----888998608950463013233221012432100012343036431122
Q gi|254780570|r   18 LSLIQATKKNDYPAEIVGVFSDNSNAQ-----GLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLICLAGYM   92 (205)
Q Consensus        18 ~~Il~~~~~~~~~~eI~~Visn~~da~-----~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv~~g~~   92 (205)
                      +++.+....... -++..+..|.+-..     ..+..++.|+.......-. .+..+|+. .+..+++.+||.|++.++.
T Consensus         5 ~~~~~~~~~~~~-~~v~ii~~d~~~g~~~~~~~~~~l~~~G~~iv~~~~~~-~~~~d~~~-~i~~i~~~~~d~v~~~~~~   81 (119)
T 3hut_A            5 PNNAAWXIGDGF-TSVAVIGVTTDWGLSSAQAFRKAFELRGGAVVVNEEVP-PGNRRFDD-VIDEIEDEAPQAIYLAXAY   81 (119)
T ss_dssp             HHHHHHHHHTTC-CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEEC-TTCCCCHH-HHHHHHHHCCSEEEEESCH
T ss_pred             HHHHHHHHHCCC-CEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECC-CCCCCHHH-HHHHHHHCCCCEEEEECCH
T ss_conf             999988876078-16999605672658999998644540697899999559-98731158-9999986599999997366


No 230
>>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix bundle (MTAC); HET: B13; 2.50A {Methanosarcina barkeri} (B:119-258)
Probab=25.65  E-value=42  Score=14.04  Aligned_cols=99  Identities=14%  Similarity=0.085  Sum_probs=59.8

Q ss_pred             CCCEEEEEECC-CCHHHH--HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             86659999769-850189--999999739998479999976888878889986089504630132332210124321000
Q gi|254780570|r    2 IRKNIVIFISG-EGTNML--SLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL   78 (205)
Q Consensus         2 ~k~riavl~SG-~Gsnl~--~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l   78 (205)
                      .++|+.+...+ ..+.+-  -+-..++..  .+++...-.+.|.....+.+++.+.....++........ .-..+.+.+
T Consensus         4 ~~~~vl~~~~~gd~H~lG~~~va~~lr~~--G~~V~~lG~~~p~~~l~~~~~~~~~d~V~lS~~~~~~~~-~~~~~~~~l   80 (140)
T 2i2x_B            4 TKGTVVCHVAEGDVHDIGKNIVTALLRAN--GYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTTTMY-AFKEVNDML   80 (140)
T ss_dssp             CSCEEEEEECTTCCCCHHHHHHHHHHHHT--TCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTTTTT-HHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHHHHC--CCCEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHH-HHHHHHHHH
T ss_conf             54304663148867668999999999977--990896588898799999999717885986523453258-899999999


Q ss_pred             CCCCCEEEEEEEEEEECCCHHHHCCC
Q ss_conf             12343036431122205721321066
Q gi|254780570|r   79 SSIQPDLICLAGYMRLLSRDFVESYK  104 (205)
Q Consensus        79 ~~~~~Dliv~~g~~~il~~~~l~~~~  104 (205)
                      ++..++..+++| +..+++++.....
T Consensus        81 r~~~~~~~v~vG-G~~~~~~~~~~~g  105 (140)
T 2i2x_B           81 LENGIKIPFACG-GGAVNQDFVSQFA  105 (140)
T ss_dssp             HTTTCCCCEEEE-STTCCHHHHHTST
T ss_pred             HHCCCCCEEEEE-CCCCCHHHHHHHC
T ss_conf             846999739988-9869999999829


No 231
>>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis H37RV} (A:1-128)
Probab=25.21  E-value=43  Score=13.99  Aligned_cols=83  Identities=11%  Similarity=0.058  Sum_probs=42.3

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEE-ECCCCC--------------------------HHHHHHHHCCCC
Q ss_conf             66599997698501899999997399984799999-768888--------------------------788899860895
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVF-SDNSNA--------------------------QGLVKARKEKVP   55 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Vi-sn~~da--------------------------~~l~~a~~~~Ip   55 (205)
                      .+||.+-+.|+-++..++-.+..--.....+..+. ...+..                          ...+.+++.+++
T Consensus        17 ~~~ILvavD~S~~s~~al~~a~~la~~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   96 (128)
T 1tq8_A           17 YKTVVVGTDGSDSSXRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAK   96 (128)
T ss_dssp             CCEEEEECCSSHHHHHHHHHHHHHHTTTSEEEEEEECCC--------------------CCTHHHHHHHHHHHHHTTTCC
T ss_pred             CCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99699998999899999999999985489879999996156554422100025689999999999999999999976996


Q ss_pred             EEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEE
Q ss_conf             0463013233221012432100012343036431
Q gi|254780570|r   56 TFPIPYKDYISRREHEKAILMQLSSIQPDLICLA   89 (205)
Q Consensus        56 ~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv~~   89 (205)
                      ...+-..    .....+.|.+..++.++|+||+.
T Consensus        97 ~~~~~v~----~G~~~~~I~~~a~~~~~DlIViG  126 (128)
T 1tq8_A           97 NVEERPI----VGAPVDALVNLADEEKADLLVVG  126 (128)
T ss_dssp             EEEEEEE----CSSHHHHHHHHHHHTTCSEEEEE
T ss_pred             EEEEEEE----ECCHHHHHHHHHHCCCEEEEEEC
T ss_conf             2999998----16889999876403530589964


No 232
>>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, protein structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} (A:)
Probab=25.10  E-value=43  Score=13.97  Aligned_cols=74  Identities=15%  Similarity=0.075  Sum_probs=40.8

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf             98665999976985018999999973999847999997688887888998608950463013233221012432100012
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSS   80 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~   80 (205)
                      +.+++++|+  |.|.--..+.+..++..  .++. |+..  +..-.+.++..|+.++.-+..+        .+.+....-
T Consensus         5 ~~~~~iiIi--G~g~~g~~ia~~L~~~g--~~v~-vid~--~~~~~~~~~~~g~~~i~gd~~~--------~~~l~~a~i   69 (140)
T 3fwz_A            5 DICNHALLV--GYGRVGSLLGEKLLASD--IPLV-VIET--SRTRVDELRERGVRAVLGNAAN--------EEIXQLAHL   69 (140)
T ss_dssp             CCCSCEEEE--CCSHHHHHHHHHHHHTT--CCEE-EEES--CHHHHHHHHHTTCEEEESCTTS--------HHHHHHTTG
T ss_pred             CCCCCEEEE--CCCHHHHHHHHHHHHCC--CCEE-EEEC--CHHHHHHHHHCCCEEEECCCCC--------HHHHHHCCC
T ss_conf             677999998--96889999999999779--9889-9989--8899999996298389727889--------999950382


Q ss_pred             CCCEEEEEE
Q ss_conf             343036431
Q gi|254780570|r   81 IQPDLICLA   89 (205)
Q Consensus        81 ~~~Dliv~~   89 (205)
                      .+.|.+++.
T Consensus        70 ~~a~~vi~~   78 (140)
T 3fwz_A           70 ECAKWLILT   78 (140)
T ss_dssp             GGCSEEEEC
T ss_pred             CCCCEEEEC
T ss_conf             418899987


No 233
>>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* (A:1-223)
Probab=25.04  E-value=34  Score=14.66  Aligned_cols=39  Identities=23%  Similarity=0.410  Sum_probs=22.9

Q ss_pred             CCCCE--EEEEECCCCHH-----------------HHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             98665--99997698501-----------------899999997399984799999768
Q gi|254780570|r    1 MIRKN--IVIFISGEGTN-----------------MLSLIQATKKNDYPAEIVGVFSDN   40 (205)
Q Consensus         1 M~k~r--iavl~SG~Gsn-----------------l~~Il~~~~~~~~~~eI~~Visn~   40 (205)
                      |++++  .+||+.|.||=                 ++..++.+..... .+++.++..+
T Consensus         1 M~~~~~~aIIlAaG~GsRl~~~tPK~li~i~Gkpli~~~i~~l~~~g~-~~iii~~~~~   58 (223)
T 2v0h_A            1 MTKKALSAVILAAGKGTRMYSDLPKVLHTIAGKPMVKHVIDTAHQLGS-ENIHLIYGHG   58 (223)
T ss_dssp             ---CCEEEEEECCCCCGGGCSSSCGGGSEETTEEHHHHHHHHHHHTTC-SCEEEEECTT
T ss_pred             CCCCCCEEEEECCCCCCCCCCCCCHHHEEECCHHHHHHHHHHHHHCCC-CEEEEEECCC
T ss_conf             997775799988878777798998687599988799999999997799-8799991799


No 234
>>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} (A:1-197)
Probab=24.88  E-value=37  Score=14.44  Aligned_cols=39  Identities=18%  Similarity=0.160  Sum_probs=24.6

Q ss_pred             CCCCEEEEEECCCCHH-----------------HHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             9866599997698501-----------------899999997399984799999768
Q gi|254780570|r    1 MIRKNIVIFISGEGTN-----------------MLSLIQATKKNDYPAEIVGVFSDN   40 (205)
Q Consensus         1 M~k~riavl~SG~Gsn-----------------l~~Il~~~~~~~~~~eI~~Visn~   40 (205)
                      |.+.+.+||+.|.||=                 ++-+++...+... .+++.|.++.
T Consensus         1 M~~~~aiIlAaG~gsRl~~~~pK~Ll~i~Gkpll~~~i~~l~~~~~-~~~vvv~~~~   56 (197)
T 1w55_A            1 MSEMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSFYP-FKKIVVTSSN   56 (197)
T ss_dssp             -CCEEEEEECCSCCTTTCSSSCGGGCEEBTEEHHHHHHHHHHTTSC-CSCEEEEESC
T ss_pred             CCCEEEEEECCEEEEECCCCCCHHHEEECCEEHHHHHHHHHHCCCC-CCEEEEECCC
T ss_conf             9952799968830011793994798044789989999999964899-8999998997


No 235
>>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} (A:1-183)
Probab=24.59  E-value=44  Score=13.91  Aligned_cols=79  Identities=10%  Similarity=-0.056  Sum_probs=46.5

Q ss_pred             CCCH--HHHHHHHHHHCCCCCCEEEEEEECCC--CC----HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             9850--18999999973999847999997688--88----7888998608950463013233221012432100012343
Q gi|254780570|r   12 GEGT--NMLSLIQATKKNDYPAEIVGVFSDNS--NA----QGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP   83 (205)
Q Consensus        12 G~Gs--nl~~Il~~~~~~~~~~eI~~Visn~~--da----~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~   83 (205)
                      |.|.  .+..+++..     +.+-++|+|++.  +.    ......+..++.+..++.-......+.-.+..+..++.++
T Consensus        15 G~g~~~~l~~~l~~~-----~~~~~livt~~~~~~~~~~~~i~~~l~~~~i~~~~~~~~~~~~t~~~v~~~~~~~~~~~~   89 (183)
T 1rrm_A           15 GRGAVGALTDEVKRR-----GYQKALIVTDKTLVQCGVVAKVTDKXDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGA   89 (183)
T ss_dssp             STTGGGGHHHHHHHH-----TCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHC-----CCCEEEEEECCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             876999999999976-----998799998977565827999999998759839998784799799999998655503588


Q ss_pred             EEEEEEEEEEEC
Q ss_conf             036431122205
Q gi|254780570|r   84 DLICLAGYMRLL   95 (205)
Q Consensus        84 Dliv~~g~~~il   95 (205)
                      |.++-.|=+..+
T Consensus        90 D~iiaiGGGsv~  101 (183)
T 1rrm_A           90 DYLIAIGGGSPQ  101 (183)
T ss_dssp             SEEEEEESHHHH
T ss_pred             CEEEECCCCCCC
T ss_conf             879976886410


No 236
>>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, cytoplasm, lipopolysaccharide biosynthesis, magnesium; HET: KDO CTP; 1.90A {Escherichia coli} PDB: 3k8e_C 1vh1_A 3jtj_A* (A:)
Probab=24.54  E-value=44  Score=13.90  Aligned_cols=37  Identities=8%  Similarity=0.119  Sum_probs=20.9

Q ss_pred             CCCCEE--EEEECCCCHH--------------HHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             986659--9997698501--------------8999999973999847999997
Q gi|254780570|r    1 MIRKNI--VIFISGEGTN--------------MLSLIQATKKNDYPAEIVGVFS   38 (205)
Q Consensus         1 M~k~ri--avl~SG~Gsn--------------l~~Il~~~~~~~~~~eI~~Vis   38 (205)
                      |+++++  +||+.|.||=              +...+++..+... .++..|.+
T Consensus        14 ~~~~~~~aIIlAaG~GtRl~PK~l~~i~GkplI~~~l~~l~~~g~-~~~ivv~~   66 (264)
T 3k8d_A           14 GSHMSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGA-ERIIVATD   66 (264)
T ss_dssp             ----CCEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHHTTC-SEEEEEES
T ss_pred             CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC-CCEEEECC
T ss_conf             688857999815877888998400122895199999999996699-96798513


No 237
>>2f8n_G Core histone macro-H2A.1; nucleosome, NCP, macroh2A, histone variant, chromatin, X- RAY structure, crystallography, structural protein/DNA complex; 2.90A {Homo sapiens} (G:)
Probab=24.52  E-value=25  Score=15.61  Aligned_cols=17  Identities=47%  Similarity=0.720  Sum_probs=12.6

Q ss_pred             CCCEE-ECCCCCCCCCCC
Q ss_conf             65423-135322333244
Q gi|254780570|r  104 KNKIL-NIHPSLLPLFPG  120 (205)
Q Consensus       104 ~~~~i-N~HpslLP~yrG  120 (205)
                      .++++ |+||+|||+=+|
T Consensus       102 ~gGV~p~i~~~ll~kk~~  119 (120)
T 2f8n_G          102 SGGVLPNIHPELLAKKRG  119 (120)
T ss_dssp             TCCCCCCCCGGGSCCC--
T ss_pred             CCCCCCCCCHHHCCCCCC
T ss_conf             785048748877367669


No 238
>>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii ME49} (A:)
Probab=24.49  E-value=44  Score=13.89  Aligned_cols=40  Identities=18%  Similarity=0.166  Sum_probs=19.2

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH
Q ss_conf             6659999769850189999999739998479999976888878
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQG   45 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~   45 (205)
                      ++||+|.  |.|+--.++......+.+ .++.++=.|.+...+
T Consensus         9 ~~KI~ii--GaG~vg~~~~~~l~~~~~-~el~L~Di~~~~l~~   48 (331)
T 1pzg_A            9 RKKVAMI--GSGMIGGTMGYLCALREL-ADVVLYDVVKGMPEG   48 (331)
T ss_dssp             CCEEEEE--CCSHHHHHHHHHHHHHTC-CEEEEECSSSSHHHH
T ss_pred             CCEEEEE--CCCHHHHHHHHHHHCCCC-CEEEEEECCCCCCHH
T ss_conf             9808998--979899999999970799-879999289991588


No 239
>>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfamily, oxidoreductase; 2.20A {Escherichia coli} (A:97-232)
Probab=24.27  E-value=44  Score=13.87  Aligned_cols=39  Identities=10%  Similarity=0.258  Sum_probs=29.0

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             665999976985-018999999973999847999997688
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      .+++++++.|.| +-+.++++...+.....++.++.+.+.
T Consensus         6 ~~~~iliagG~GIaP~~s~l~~~~~~~~~~~v~l~~~~r~   45 (136)
T 1qfj_A            6 ERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGRE   45 (136)
T ss_dssp             SSCEEEEEETTCHHHHHHHHHHHHHHCTTCCEEEEEEESS
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             6758999369751319999999998099998999985388


No 240
>>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} (A:373-590)
Probab=24.17  E-value=44  Score=13.85  Aligned_cols=35  Identities=23%  Similarity=0.362  Sum_probs=16.3

Q ss_pred             EEEEEECCCCH---HHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf             59999769850---189999999739998479999976888
Q gi|254780570|r    5 NIVIFISGEGT---NMLSLIQATKKNDYPAEIVGVFSDNSN   42 (205)
Q Consensus         5 riavl~SG~Gs---nl~~Il~~~~~~~~~~eI~~Visn~~d   42 (205)
                      |-++.++|-|+   ++..|.-+.+.   +..+..|+-||..
T Consensus        73 ~~Vv~i~GDG~f~~~~~~L~ta~~~---~~pi~~vv~nN~~  110 (218)
T 1ybh_A           73 AIVVDIDGDGSFIMNVQELATIRVE---NLPVKVLLLNNQH  110 (218)
T ss_dssp             SCEEEEEEHHHHHHTTTHHHHHHHT---TCCEEEEEEECSB
T ss_pred             CEEEEEECCCCHHCCHHHHHHHHHH---CCCEEEEEEECCC
T ss_conf             8699996783131156899999997---8793999996998


No 241
>>3eyw_A C-terminal domain of glutathione-regulated potassium-efflux system protein KEFC fused...; KTN, RCK, K+ channel, K+ transport, K+ efflux; HET: FMN NAD; 2.40A {Escherichia coli K12} (A:1-123)
Probab=24.04  E-value=45  Score=13.84  Aligned_cols=73  Identities=14%  Similarity=0.098  Sum_probs=37.0

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             86659999769850189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      +++|++|+  |.|.--..+.+...+.  .++|. ++. + +...++.++..+.+....+..+.        ..+....-.
T Consensus         3 ~~~~v~Ii--G~G~~G~~ia~~L~~~--G~~V~-v~d-~-~~~~~~~~~~~g~~~~~~d~~~~--------~~~~~~~~~   67 (123)
T 3eyw_A            3 HGMRVIIA--GFGRFGQITGRLLLSS--GVKMV-VLD-H-DPDHIETLRKFGMKVFYGDATRM--------DLLESAGAA   67 (123)
T ss_dssp             --CCEEEE--CCSHHHHHHHHHHHHT--TCCEE-EEE-S-CHHHHHHHHHTTCCCEESCTTCH--------HHHHHHTTT
T ss_pred             CCCEEEEE--CCCHHHHHHHHHHHHC--CCCEE-EEE-C-CHHHHHHHHHCCCEEEEECCCCH--------HHHHHCCCC
T ss_conf             88989998--9888999999999968--99889-998-9-99999999976990999538999--------999856976


Q ss_pred             CCEEEEEE
Q ss_conf             43036431
Q gi|254780570|r   82 QPDLICLA   89 (205)
Q Consensus        82 ~~Dliv~~   89 (205)
                      ++|+++++
T Consensus        68 ~ad~vi~~   75 (123)
T 3eyw_A           68 KAEVLINA   75 (123)
T ss_dssp             TCSEEEEC
T ss_pred             CCCEEEEE
T ss_conf             48999997


No 242
>>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} (A:1-155,A:337-354)
Probab=23.93  E-value=45  Score=13.82  Aligned_cols=39  Identities=8%  Similarity=0.092  Sum_probs=22.4

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             98665999976985018999999973999847999997688
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      |.+.|++|.. .+|.--+.|++...+ ....+++.+....+
T Consensus         6 ~~~ikVaIvG-atG~iGr~l~rll~~-~p~~eivai~~s~~   44 (173)
T 1ys4_A            6 KXKIKVGVLG-ATGSVGQRFVQLLAD-HPXFELTALAASER   44 (173)
T ss_dssp             -CCEEEEEET-TTSHHHHHHHHHHTT-CSSEEEEEEEECTT
T ss_pred             CCCCEEEEEC-CCCHHHHHHHHHHHC-CCCCEEEEEEECCC
T ss_conf             6764399999-743999999999975-99876899997575


No 243
>>1udg_A Uracil-DNA glycosylase; hydrolase; 1.75A {Herpes simplex virus} (A:70-244)
Probab=23.80  E-value=24  Score=15.65  Aligned_cols=103  Identities=17%  Similarity=0.127  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCE----EEEECCCCCCC-----CCHHHHHHHHCCCCCCEEE
Q ss_conf             18999999973999847999997688887888998608950----46301323322-----1012432100012343036
Q gi|254780570|r   16 NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPT----FPIPYKDYISR-----REHEKAILMQLSSIQPDLI   86 (205)
Q Consensus        16 nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~----~~i~~~~~~~~-----~~~~~~l~~~l~~~~~Dli   86 (205)
                      .|++|++.....--..       ..+..+-++.=.+.|+=.    .++....-.++     +.|.+.+++.|.+.+..+|
T Consensus        43 SL~NI~kel~~~~~~~-------~~~~~g~L~~wakQGVLLLNt~LTv~~g~~~SH~~~gWe~ft~~ii~~l~~~~~~vv  115 (175)
T 1udg_A           43 SLRNVLAAVKNCYPEA-------RMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLV  115 (175)
T ss_dssp             HHHHHHHHHHHHCTTC-------CCCSCCCCHHHHHTTEEEEESSCCEETTBTTTTTTSSHHHHHHHHHHHHHHHCSSCE
T ss_pred             HHHHHHHHHHHHCCCC-------CCCCCCCHHHHHHCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             7899999997534777-------777788777785277787750488872545776421099999999999972889869


Q ss_pred             EEEEEEEECCC-HHHHCCCCCEE-ECCCCCCCC--CCCCCCCCC
Q ss_conf             43112220572-13210665423-135322333--244421210
Q gi|254780570|r   87 CLAGYMRLLSR-DFVESYKNKIL-NIHPSLLPL--FPGLHTHRR  126 (205)
Q Consensus        87 v~~g~~~il~~-~~l~~~~~~~i-N~HpslLP~--yrG~~~~~~  126 (205)
                      ++. |+..-.+ .-+..-+.-+| --|||.|-.  |.|.++...
T Consensus       116 f~L-wG~~A~~~~~~~~~~h~il~~~HPSpls~~~F~~~~~F~~  158 (175)
T 1udg_A          116 FML-WGTHAQNAIRPDPRVHCVLKFSHPSPLSKVPFGTCQHFLV  158 (175)
T ss_dssp             EEE-ESHHHHHHCCCCTTTSEEEEECCSSTTSSSCGGGCCHHHH
T ss_pred             EEE-EHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCHHHH
T ss_conf             997-3466765620389998699878998454369899977999


No 244
>>3cxm_A Uracil-DNA glycosylase; base excision repair, BER, DNA damage repair, MSGPP, SGPP, hydrolase, 5-bromouracil, structural genomics; 1.50A {Leishmania naiffi} (A:83-268)
Probab=23.64  E-value=22  Score=15.90  Aligned_cols=98  Identities=15%  Similarity=0.226  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCC----EEEEECCCCCCC------CCHHHHHHHHCCCCCCE-
Q ss_conf             1899999997399984799999768888788899860895----046301323322------10124321000123430-
Q gi|254780570|r   16 NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVP----TFPIPYKDYISR------REHEKAILMQLSSIQPD-   84 (205)
Q Consensus        16 nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip----~~~i~~~~~~~~------~~~~~~l~~~l~~~~~D-   84 (205)
                      .|++|++..+..--..       +.|..+-++.=.+.|+=    +..+....-.+.      +.|.+.+++.|.+.+.+ 
T Consensus        43 SL~NI~keL~~~~~~~-------~~p~~g~L~~Wa~QGVLLLNt~LTv~~g~~~sH~~~~gWe~ft~~ii~~l~~~~~~~  115 (186)
T 3cxm_A           43 SLRNIYKELTTDIAGF-------QAPKHGYLQSWSEQGMLMLNATLTVEAHKANSHSKTSGWAAFTDAVIQHLSQHHPNR  115 (186)
T ss_dssp             HHHHHHHHHHHHSTTC-------CCCSSCCCHHHHTTTEEEEESSCCEETTCTTTTTTTSCHHHHHHHHHHHHHHHCSSC
T ss_pred             CHHHHHHHHHHHCCCC-------CCCCCCCCCHHHHCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf             2999999999752878-------899987611152098799962478888976533344058999999999985157786


Q ss_pred             EEEEEEEEEEC--CCHHHHCCCCCE-EECCCCCCCCCCCC
Q ss_conf             36431122205--721321066542-31353223332444
Q gi|254780570|r   85 LICLAGYMRLL--SRDFVESYKNKI-LNIHPSLLPLFPGL  121 (205)
Q Consensus        85 liv~~g~~~il--~~~~l~~~~~~~-iN~HpslLP~yrG~  121 (205)
                      +|++. |+..-  -..+++.-+..+ -..|||.|-.+||.
T Consensus       116 iVf~L-wG~~A~~~~~~i~~~~~~vl~~~HPSpls~~~~F  154 (186)
T 3cxm_A          116 LVFLL-WGGYAQQKKRLIDANRHVVLENVHPSPLSANRGW  154 (186)
T ss_dssp             CEEEE-ESHHHHGGGGGSCTTTSEEEEECCSSHHHHTTTT
T ss_pred             EEEEE-ECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
T ss_conf             69998-4666788986089878779973799962446688


No 245
>>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} (A:1-129)
Probab=23.64  E-value=45  Score=13.79  Aligned_cols=29  Identities=7%  Similarity=0.117  Sum_probs=17.9

Q ss_pred             EEEEEC--CCCCHHHHHHHHCCCCEEEEECC
Q ss_conf             999976--88887888998608950463013
Q gi|254780570|r   34 VGVFSD--NSNAQGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus        34 ~~Visn--~~da~~l~~a~~~~Ip~~~i~~~   62 (205)
                      +.|+|.  .++...++.|+++|+|.+..+..
T Consensus        83 ~iiit~~~~~~~~i~~~a~~~~iPil~t~~~  113 (129)
T 1ko7_A           83 AIIVTRDLEPPEELIEAAKEHETPLITSKIA  113 (129)
T ss_dssp             CEEECTTCCCCHHHHHHHHHTTCCEEECCSC
T ss_pred             EEEEECCCCCCHHHHHHHHHHCCEEEECCCC
T ss_conf             8999799999899999999819839984874


No 246
>>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A* (A:100-257)
Probab=23.59  E-value=31  Score=14.96  Aligned_cols=40  Identities=20%  Similarity=0.291  Sum_probs=26.2

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf             665999976985-0189999999739998479999976888
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNSN   42 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~d   42 (205)
                      .++++.++.|.| +-+.++++...+...+..+.++.+.+..
T Consensus         7 ~~~iv~iagGtGIaP~~s~l~~~~~~~~~~~v~l~~~~r~~   47 (158)
T 2qdx_A            7 GKHLYLLSTGTGMAPFLSVIQDPETYERYEKVILVHGVRWV   47 (158)
T ss_dssp             CSEEEEEEEGGGGHHHHHHTTCHHHHHHCSEEEEEEEESSG
T ss_pred             CCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCH
T ss_conf             63279998067733210666666764368768999834898


No 247
>>2cwd_A Low molecular weight phosphotyrosine protein phosphatase; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus HB8} (A:)
Probab=23.57  E-value=46  Score=13.78  Aligned_cols=59  Identities=12%  Similarity=0.034  Sum_probs=29.3

Q ss_pred             CCCC-EEEEEECCCC--H-HHHHHHHHHHCC---CCCCEE--EEEEEC----CCCCHHHHHHHHCCCCEEEE
Q ss_conf             9866-5999976985--0-189999999739---998479--999976----88887888998608950463
Q gi|254780570|r    1 MIRK-NIVIFISGEG--T-NMLSLIQATKKN---DYPAEI--VGVFSD----NSNAQGLVKARKEKVPTFPI   59 (205)
Q Consensus         1 M~k~-riavl~SG~G--s-nl~~Il~~~~~~---~~~~eI--~~Visn----~~da~~l~~a~~~~Ip~~~i   59 (205)
                      |.++ ||.+.+.||-  | =+++|++.....   .-.+++  +++...    ..+.......++.|++.-..
T Consensus         1 m~~~~~iLfvc~~N~cRS~mAEal~~~~~~~~~l~~~~~v~SAG~~~~~~~~~~~~~a~~~l~~~gi~~s~~   72 (161)
T 2cwd_A            1 MDRPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFPHV   72 (161)
T ss_dssp             -CCCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCCCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf             999887999849848799999999999888568775246850320157888788999999998632345666


No 248
>>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genomics, NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus VF5} PDB: 2z95_A* (A:1-178)
Probab=23.56  E-value=46  Score=13.78  Aligned_cols=81  Identities=19%  Similarity=0.083  Sum_probs=35.9

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCC-CCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             98665999976985018999999973999847999997688-88788899860895046301323322101243210001
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNS-NAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~-da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      |..||+.|.+ |+|.--.+|++...+.  ..++..+..+.. ................ +...+....    ..+...+.
T Consensus         1 m~~k~vlVTG-atG~iG~~l~~~L~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~----~~~~~~~~   72 (178)
T 2z1m_A            1 MSGKRALITG-IRGQDGAYLAKLLLEK--GYEVYGADRRSGEFASWRLKELGIENDVK-IIHMDLLEF----SNIIRTIE   72 (178)
T ss_dssp             --CCEEEEET-TTSHHHHHHHHHHHHT--TCEEEEECSCCSTTTTHHHHHTTCTTTEE-ECCCCTTCH----HHHHHHHH
T ss_pred             CCCCEEEEEC-CCCHHHHHHHHHHHHC--CCEEEEEECCCCCCCHHHHHHHCCCCCCE-EEEEECCCH----HHHHHHHH
T ss_conf             9809899978-8868999999999978--39899997999764356688743158977-999136785----76123340


Q ss_pred             CCCCEEEEEE
Q ss_conf             2343036431
Q gi|254780570|r   80 SIQPDLICLA   89 (205)
Q Consensus        80 ~~~~Dliv~~   89 (205)
                      ..++|.++..
T Consensus        73 ~~~~~~~~~~   82 (178)
T 2z1m_A           73 KVQPDEVYNL   82 (178)
T ss_dssp             HHCCSEEEEC
T ss_pred             CCCCCEEEEC
T ss_conf             3698377522


No 249
>>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A (A:490-616,A:753-789)
Probab=23.56  E-value=44  Score=13.90  Aligned_cols=14  Identities=29%  Similarity=0.475  Sum_probs=12.1

Q ss_pred             CCEEEEEECCCCHH
Q ss_conf             66599997698501
Q gi|254780570|r    3 RKNIVIFISGEGTN   16 (205)
Q Consensus         3 k~riavl~SG~Gsn   16 (205)
                      ++|+++++||.|+.
T Consensus         2 ~pkiafvFpGQGsq   15 (164)
T 3hhd_A            2 ERPLWFICSGMGTQ   15 (164)
T ss_dssp             CCCEEEEECCSSCC
T ss_pred             CCCEEEEECCCCCC
T ss_conf             78538996577652


No 250
>>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 helix bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} (A:127-295)
Probab=23.53  E-value=46  Score=13.77  Aligned_cols=76  Identities=9%  Similarity=-0.048  Sum_probs=36.0

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             86659999769850189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      .++|+++++.|+  -....+.+.... -..+++.|+ |+.....-+.+++++.+.-... ..+       ..+.+.+...
T Consensus         2 ~~~ri~iIG~G~--~g~~~~~~l~~~-~~~~~v~v~-dr~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~   69 (169)
T 1x7d_A            2 NARKXALIGNGA--QSEFQALAFHKH-LGIEEIVAY-DTDPLATAKLIANLKEYSGLTI-RRA-------SSVAEAVKGV   69 (169)
T ss_dssp             TCCEEEEECCST--THHHHHHHHHHH-SCCCEEEEE-CSSHHHHHHHHHHHTTCTTCEE-EEC-------SSHHHHHTTC
T ss_pred             CCCEEEEECCCH--HHHHHHHHHHHH-HCEEEEEEE-ECCHHHHHHHHHHHHHHCCCCC-CCC-------CCHHHHHHCC
T ss_conf             984489982656--569999998753-120367998-2582489999997432068763-127-------9999997148


Q ss_pred             CCEEEEEE
Q ss_conf             43036431
Q gi|254780570|r   82 QPDLICLA   89 (205)
Q Consensus        82 ~~Dliv~~   89 (205)
                      +++++++.
T Consensus        70 di~~v~~~   77 (169)
T 1x7d_A           70 DIITTVTA   77 (169)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEECC
T ss_conf             71364026


No 251
>>1tzy_A Histone H2A-IV; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} (A:)
Probab=23.42  E-value=26  Score=15.45  Aligned_cols=17  Identities=35%  Similarity=0.456  Sum_probs=12.9

Q ss_pred             EEECCCCCCCCCCCCCC
Q ss_conf             23135322333244421
Q gi|254780570|r  107 ILNIHPSLLPLFPGLHT  123 (205)
Q Consensus       107 ~iN~HpslLP~yrG~~~  123 (205)
                      +=|+||+|||+-.+..+
T Consensus       109 lP~i~~~ll~kk~~~~~  125 (129)
T 1tzy_A          109 LPNIQAVLLPKKTDSHK  125 (129)
T ss_dssp             CCCCCGGGSCC------
T ss_pred             CCCCCHHHCCCCCCCCC
T ss_conf             66426765587667777


No 252
>>2nqb_C Histone H2A; nucleosome, NCP, chromatin, structural protein/DNA complex; 2.30A {Drosophila melanogaster} PDB: 2pyo_C* (C:)
Probab=23.40  E-value=27  Score=15.37  Aligned_cols=15  Identities=33%  Similarity=0.361  Sum_probs=11.5

Q ss_pred             EEECCCCCCCCCCCC
Q ss_conf             231353223332444
Q gi|254780570|r  107 ILNIHPSLLPLFPGL  121 (205)
Q Consensus       107 ~iN~HpslLP~yrG~  121 (205)
                      +=++||+|||+.+..
T Consensus       107 lP~i~~~ll~kk~~~  121 (123)
T 2nqb_C          107 LPNIQAVLLPKKTEK  121 (123)
T ss_dssp             CCCCCGGGSSCC---
T ss_pred             CCCCCHHHCCCCCCC
T ss_conf             675057556886556


No 253
>>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A* (A:1-207)
Probab=23.25  E-value=46  Score=13.74  Aligned_cols=55  Identities=18%  Similarity=0.306  Sum_probs=30.4

Q ss_pred             CCEEEEEECCC-CHH-HHHHHHHHHCCCCCCEEEEEEECC--------------CCCHHHHHHHHCCCCEEEEECC
Q ss_conf             66599997698-501-899999997399984799999768--------------8887888998608950463013
Q gi|254780570|r    3 RKNIVIFISGE-GTN-MLSLIQATKKNDYPAEIVGVFSDN--------------SNAQGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus         3 k~riavl~SG~-Gsn-l~~Il~~~~~~~~~~eI~~Visn~--------------~da~~l~~a~~~~Ip~~~i~~~   62 (205)
                      +.|++|.+||+ .|. +..++.  +.   ..++..+.-+.              .....-+.|+.+|||++.++..
T Consensus        17 ~~kvvv~~SGG~DS~~ll~l~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgi~~~~~~~~   87 (207)
T 2der_A           17 AKKVIVGMSGGVDSSVSAWLLQ--QQ---GYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFA   87 (207)
T ss_dssp             CCEEEEECCSCSTTHHHHHHHH--TT---CCEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECH
T ss_pred             CCEEEEECCCCHHHHHHHHHHH--HC---CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHH
T ss_conf             8889999878699999999998--76---99599999988668887777886789999999999849977997879


No 254
>>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} (A:367-566)
Probab=23.23  E-value=46  Score=13.73  Aligned_cols=34  Identities=21%  Similarity=0.342  Sum_probs=13.9

Q ss_pred             EEEEEECCCCH---HHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             59999769850---18999999973999847999997688
Q gi|254780570|r    5 NIVIFISGEGT---NMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         5 riavl~SG~Gs---nl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      |-++.+.|-|+   ++..+.-+.+.   +..+..|+.||.
T Consensus        73 ~~vi~i~GDGaf~~~~~el~~~~~~---~~~~~ivv~nN~  109 (200)
T 1ozh_A           73 RKVVSVSGDGGFLQSSMELETAVRL---KANVLHLIWVDN  109 (200)
T ss_dssp             SEEEEEEEHHHHHHHTTHHHHHHHH---TCCEEEEEEECS
T ss_pred             CEEEEEECCHHHHCCHHHHHHHHHH---CCCCEEEEEECC
T ss_conf             7257997666764579999999982---999879999899


No 255
>>3cf4_G Acetyl-COA decarbonylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductase; 2.00A {Methanosarcina barkeri} (G:)
Probab=23.19  E-value=46  Score=13.73  Aligned_cols=99  Identities=8%  Similarity=-0.017  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHCCCCCCEEEEEEEC---CCCC--HHHHHHHHCCCCEEEEECCCCCCCCCH------------------HH
Q ss_conf             189999999739998479999976---8888--788899860895046301323322101------------------24
Q gi|254780570|r   16 NMLSLIQATKKNDYPAEIVGVFSD---NSNA--QGLVKARKEKVPTFPIPYKDYISRREH------------------EK   72 (205)
Q Consensus        16 nl~~Il~~~~~~~~~~eI~~Visn---~~da--~~l~~a~~~~Ip~~~i~~~~~~~~~~~------------------~~   72 (205)
                      .++.+.+...+-+-   ...++-.   +.++  ...+.|++.|+|+..-...+-.-.+..                  ..
T Consensus        23 ~i~~~~~~L~~Akr---Pvii~G~~~~~~~~~~~l~~lae~~g~Pv~~t~~gkg~~~~~hp~~~g~~~g~~g~~G~~~~~   99 (170)
T 3cf4_G           23 SPEMAAKIISKAKR---PLLMVGTLALDPELLDRVVKISKAANIPIAATGSSLAVLADKDVDAKYINAHMLGFYLTDPKW   99 (170)
T ss_dssp             CHHHHHHHHHHCSS---EEEEECSTTCCHHHHHHHHHHHHHHTCCEEECTTTHHHHTTSSSCEEECCHHHHHHHTTCTTC
T ss_pred             CHHHHHHHHHHCCC---CEEEECCCCCCHHHHHHHHHHHHHHCCCEEECHHHCCCCCCCCCHHCCCCCCCCCCCCCHHHH
T ss_conf             99999999996699---889968886432689999999998497889872226767766821116452224652210278


Q ss_pred             HHHHHCCCCCCEEEEEEEEEE--ECC--CHHHHCCCCCEEECCCCCCCCCC
Q ss_conf             321000123430364311222--057--21321066542313532233324
Q gi|254780570|r   73 AILMQLSSIQPDLICLAGYMR--LLS--RDFVESYKNKILNIHPSLLPLFP  119 (205)
Q Consensus        73 ~l~~~l~~~~~Dliv~~g~~~--il~--~~~l~~~~~~~iN~HpslLP~yr  119 (205)
                      ...+.+  .+.|++++.|...  ..+  ..+...-+...|+++|.+--.|+
T Consensus       100 ~~~~~~--~~aDlii~iG~~~~~~~t~~~~~~~~~~~i~Id~d~~~~~~~~  148 (170)
T 3cf4_G          100 PGLDGN--GNYDMIITIGFKKFYINQVLSAAKNFSNLKTIAIERGYIQNAT  148 (170)
T ss_dssp             CCSSSS--CCCSEEEEESCCHHHHHHHHHHHHHHCCCCEEECSSSCCTTSS
T ss_pred             HHHHHH--CCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCC
T ss_conf             888533--4678899957700421412023346677079982801314765


No 256
>>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; NP_391141.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis} (A:1-155)
Probab=23.15  E-value=46  Score=13.72  Aligned_cols=33  Identities=21%  Similarity=0.244  Sum_probs=18.3

Q ss_pred             CCEEEEEEECCCCC----HHHHHHHHCCCCEEEEECC
Q ss_conf             84799999768888----7888998608950463013
Q gi|254780570|r   30 PAEIVGVFSDNSNA----QGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus        30 ~~eI~~Visn~~da----~~l~~a~~~~Ip~~~i~~~   62 (205)
                      +-+++.++|.....    ..++.|++.|+++..+-..
T Consensus        74 ~~dlvi~iS~sG~t~~~~~~~~~a~~~g~~~I~iT~~  110 (155)
T 3eua_A           74 EKSLVILCSHSGNTPETVKAAAFARGKGALTIAXTFK  110 (155)
T ss_dssp             TTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCC
T ss_conf             9968999808999867999998655302213321276


No 257
>>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAP; 2.79A {Bacillus subtilis} (A:128-271)
Probab=23.15  E-value=46  Score=13.72  Aligned_cols=88  Identities=14%  Similarity=0.196  Sum_probs=48.3

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             86659999769850189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      -.+|++|.  |.|..-..+.+..+..  .++|  +++|+. ....+.++..+.....  ..          .+.+.+.  
T Consensus        29 ~~~~v~ii--G~G~iG~~~a~~l~~~--g~~V--~~~~~~-~~~~~~~~~~~~~~~~--~~----------~~~e~~~--   87 (144)
T 2rir_A           29 HGSQVAVL--GLGRTGXTIARTFAAL--GANV--KVGARS-SAHLARITEXGLVPFH--TD----------ELKEHVK--   87 (144)
T ss_dssp             TTSEEEEE--CCSHHHHHHHHHHHHT--TCEE--EEEESS-HHHHHHHHHTTCEEEE--GG----------GHHHHST--
T ss_pred             CCCEEEEE--CCCHHHHHHHHHHHHC--CCEE--EEECCC-HHHHHHHHHHHCCEEE--EC----------CHHHHCC--
T ss_conf             78889998--9708999999998744--8558--984387-5566678875054365--20----------2012036--


Q ss_pred             CCEEEEEEEEEEECCCHHHHCCCCC--EEEC
Q ss_conf             4303643112220572132106654--2313
Q gi|254780570|r   82 QPDLICLAGYMRLLSRDFVESYKNK--ILNI  110 (205)
Q Consensus        82 ~~Dliv~~g~~~il~~~~l~~~~~~--~iN~  110 (205)
                      +.|+|+++-=..++.++.++..+.+  ++|+
T Consensus        88 ~aDvVi~~~p~~~i~~~~~~~~k~g~iiid~  118 (144)
T 2rir_A           88 DIDICINTIPSXILNQTVLSSXTPKTLILDL  118 (144)
T ss_dssp             TCSEEEECCSSCCBCHHHHTTSCTTCEEEEC
T ss_pred             CCEEEECCCCCCCCCHHHHHCCCCCCEEEEE
T ss_conf             7517971355543345677536999689992


No 258
>>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} (A:1-158,A:187-259)
Probab=23.14  E-value=46  Score=13.72  Aligned_cols=18  Identities=28%  Similarity=0.466  Sum_probs=14.4

Q ss_pred             CCCEEEEEECCCCHHHHH
Q ss_conf             866599997698501899
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLS   19 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~   19 (205)
                      |+++.+||+.|.||-|..
T Consensus         1 M~mkAVILAaG~GtRl~p   18 (231)
T 1tzf_A            1 MASKAVILAGGLGTRLSE   18 (231)
T ss_dssp             CCCEEEEEECSCC-----
T ss_pred             CCCCEEEECCCCCCCCCH
T ss_conf             985089988877546783


No 259
>>3hba_A Putative phosphosugar isomerase; YP_563707.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217} (A:42-147)
Probab=23.06  E-value=47  Score=13.71  Aligned_cols=33  Identities=12%  Similarity=0.089  Sum_probs=21.1

Q ss_pred             CCEEEEEEECCCCC----HHHHHHHHCCCCEEEEECC
Q ss_conf             84799999768888----7888998608950463013
Q gi|254780570|r   30 PAEIVGVFSDNSNA----QGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus        30 ~~eI~~Visn~~da----~~l~~a~~~~Ip~~~i~~~   62 (205)
                      +.+++.++|.....    ..++.|++.|.++..+-..
T Consensus        49 ~~d~vi~iS~sg~t~~~~~~~~~ak~~ga~ii~iT~~   85 (106)
T 3hba_A           49 AGGLVIVISQSGRSPDILAQARXAKNAGAFCVALVND   85 (106)
T ss_dssp             TTCEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             8828999833778767999999898669737876304


No 260
>>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} (A:)
Probab=22.97  E-value=47  Score=13.70  Aligned_cols=80  Identities=14%  Similarity=0.118  Sum_probs=31.7

Q ss_pred             CCCCEEEEEECCCCHHH-HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHH----HHCCCCEEEEECCCCCCCCCHHHHHH
Q ss_conf             98665999976985018-99999997399984799999768888788899----86089504630132332210124321
Q gi|254780570|r    1 MIRKNIVIFISGEGTNM-LSLIQATKKNDYPAEIVGVFSDNSNAQGLVKA----RKEKVPTFPIPYKDYISRREHEKAIL   75 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl-~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a----~~~~Ip~~~i~~~~~~~~~~~~~~l~   75 (205)
                      |+|   ++|+.|.++.+ +++.+++...  .++|+++-  +......+.+    ++.+.....+ ..|..+.++.++.+.
T Consensus         1 MnK---~vlITGas~GIG~aiA~~la~~--G~~Vvi~~--r~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~~~~~~~   72 (250)
T 2cfc_A            1 MSR---VAIVTGASSGNGLAIATRFLAR--GDRVAALD--LSAETLEETARTHWHAYADKVLRV-RADVADEGDVNAAIA   72 (250)
T ss_dssp             CCC---EEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHSTTTGGGEEEE-ECCTTCHHHHHHHHH
T ss_pred             CCC---EEEECCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHHHCCCCEEEE-ECCCCCHHHHHHHHH
T ss_conf             998---9999288978999999999987--99899998--988999999999998649948999-812799999999999


Q ss_pred             HHCCCC-CCEEEEE
Q ss_conf             000123-4303643
Q gi|254780570|r   76 MQLSSI-QPDLICL   88 (205)
Q Consensus        76 ~~l~~~-~~Dliv~   88 (205)
                      +..+++ .+|++|.
T Consensus        73 ~~~~~~g~id~lv~   86 (250)
T 2cfc_A           73 ATMEQFGAIDVLVN   86 (250)
T ss_dssp             HHHHHHSCCCEEEE
T ss_pred             HHHHHHCCCCEEEE
T ss_conf             99998099879997


No 261
>>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae} (A:1-117,A:236-266)
Probab=22.83  E-value=47  Score=13.68  Aligned_cols=65  Identities=11%  Similarity=0.084  Sum_probs=32.1

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHC----CCC-CCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHH
Q ss_conf             665999976985018999999973----999-847999997688887888998608950463013233221012432100
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKK----NDY-PAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQ   77 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~----~~~-~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~   77 (205)
                      +.||+++-++.-..+....+.+++    ..+ ..++...+.|-                        ......-.++.+.
T Consensus         2 ~~rIgilq~~~~~~l~~~~~gf~~~L~~~G~~e~ni~i~~~~A------------------------~~D~~~l~~ia~~   57 (148)
T 3lft_A            2 NAKIGVLQFVSHPSLDLIYKGIQDGLAEEGYKDDQVKIDFXNS------------------------EGDQSKVATXSKQ   57 (148)
T ss_dssp             CEEEEEEECSCCHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEC------------------------TTCHHHHHHHHHH
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC------------------------CCCHHHHHHHHHH
T ss_conf             9769999787773899999999999997599876079999679------------------------8899999999999


Q ss_pred             CCCCCCEEEEEEEE
Q ss_conf             01234303643112
Q gi|254780570|r   78 LSSIQPDLICLAGY   91 (205)
Q Consensus        78 l~~~~~Dliv~~g~   91 (205)
                      +...+||+|+..|-
T Consensus        58 l~~~~~DlIva~gT   71 (148)
T 3lft_A           58 LVANGNDLVVGIAT   71 (148)
T ss_dssp             HTTSSCSEEEEESH
T ss_pred             HHHCCCCEEEECCC
T ss_conf             97469867984484


No 262
>>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, malate dehydrogenase; HET: NAI; 2.00A {Ascaris suum} (A:13-33,A:296-574)
Probab=22.83  E-value=22  Score=15.92  Aligned_cols=31  Identities=13%  Similarity=0.247  Sum_probs=18.3

Q ss_pred             HHHHHCCCCCCEE-EEEEEEEEECCCHHHHCC
Q ss_conf             3210001234303-643112220572132106
Q gi|254780570|r   73 AILMQLSSIQPDL-ICLAGYMRLLSRDFVESY  103 (205)
Q Consensus        73 ~l~~~l~~~~~Dl-iv~~g~~~il~~~~l~~~  103 (205)
                      .+.+.++..+||. +-+.+....+++++++..
T Consensus       115 ~L~e~i~~~kp~vLiG~S~~~g~ft~evi~~M  146 (300)
T 1o0s_A          115 SILEVIRAARPGALIGASTVRGAFNEEVIRAM  146 (300)
T ss_dssp             CHHHHHHHHCCSEEEECSSCTTCSCHHHHHHH
T ss_pred             CHHHHHHCCCCCEEEECCCCCCCCCHHHHHHH
T ss_conf             67888623577607824545676777999999


No 263
>>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infectious disease, coenzyme A; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei 1710B} PDB: 3ikz_A* (A:1-127)
Probab=22.68  E-value=30  Score=15.03  Aligned_cols=36  Identities=8%  Similarity=-0.033  Sum_probs=17.8

Q ss_pred             CCCEEEEEECCC-----CHHHHHHHHHHHCCCCCCEEEEEEE-CCC
Q ss_conf             866599997698-----5018999999973999847999997-688
Q gi|254780570|r    2 IRKNIVIFISGE-----GTNMLSLIQATKKNDYPAEIVGVFS-DNS   41 (205)
Q Consensus         2 ~k~riavl~SG~-----Gsnl~~Il~~~~~~~~~~eI~~Vis-n~~   41 (205)
                      .|+|+++++...     |+ +.-+-.+...+   .++..++| |++
T Consensus         3 ~k~~i~~~~GsFdP~H~GH-~~ll~~A~~~~---d~l~v~v~~~~~   44 (127)
T 3k9w_A            3 GSMVVAVYPGTFDPLTRGH-EDLVRRASSIF---DTLVVGVADSRA   44 (127)
T ss_dssp             CCCCEEEEEECCTTCCHHH-HHHHHHHHHHS---SEEEEEEECCGG
T ss_pred             CCCEEEEECCCCCCCCHHH-HHHHHHHHHHC---CCCEECCCCCCC
T ss_conf             8728999585778888999-99999999868---931141445411


No 264
>>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A* (A:1-109,A:247-284)
Probab=22.57  E-value=48  Score=13.65  Aligned_cols=45  Identities=9%  Similarity=0.157  Sum_probs=28.7

Q ss_pred             HHHHHH-HHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEE
Q ss_conf             788899-8608950463013233221012432100012343036431122
Q gi|254780570|r   44 QGLVKA-RKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLICLAGYM   92 (205)
Q Consensus        44 ~~l~~a-~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv~~g~~   92 (205)
                      .+++++ +++++.+..+....   ..+++..+ +.+.+.++|||++.||.
T Consensus        27 ~G~~~~~~~~gi~~~~~e~~~---~~~~~~~~-~~~a~~g~dlIi~~g~~   72 (147)
T 2fqx_A           27 EGISRFAQENNAKCKYVTAST---DAEYVPSL-SAFADENMGLVVACGSF   72 (147)
T ss_dssp             HHHHHHHHHTTCEEEEEECCS---GGGHHHHH-HHHHHTTCSEEEEESTT
T ss_pred             HHHHHHHHHHCCEEEEEECCC---HHHHHHHH-HHHHHCCCCEEEECCCC
T ss_conf             999999998598599994599---89999999-99997799989991754


No 265
>>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} (A:)
Probab=22.45  E-value=48  Score=13.63  Aligned_cols=85  Identities=12%  Similarity=0.062  Sum_probs=46.4

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHC-CCCCCEEEEE--EECCCCC----------------------H-----------
Q ss_conf             98665999976985018999999973-9998479999--9768888----------------------7-----------
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKK-NDYPAEIVGV--FSDNSNA----------------------Q-----------   44 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~-~~~~~eI~~V--isn~~da----------------------~-----------   44 (205)
                      |+.+||.|-++++..+-.++-.+... ...+.++.++  +...+..                      .           
T Consensus         3 ~~~~~ILv~vD~s~~s~~al~~a~~~a~~~~~~i~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (162)
T 1mjh_A            3 VMYKKILYPTDFSETAEIALKHVKAFKTLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAK   82 (162)
T ss_dssp             CCCCEEEEECCSCHHHHHHHHHHHHTCCSSCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHH
T ss_pred             HHCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             32094999988998999999999999875399699999970355554433222235333320077889999999999999


Q ss_pred             -HH----HHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             -88----89986089504630132332210124321000123430364311
Q gi|254780570|r   45 -GL----VKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLICLAG   90 (205)
Q Consensus        45 -~l----~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv~~g   90 (205)
                       .+    +.+...++++...     .......+.|.+..++.++|++|+..
T Consensus        83 ~~l~~~~~~~~~~~~~~~~~-----~~~g~~~~~I~~~a~~~~~dliVlG~  128 (162)
T 1mjh_A           83 NKMENIKKELEDVGFKVKDI-----IVVGIPHEEIVKIAEDEGVDIIIMGS  128 (162)
T ss_dssp             HHHHHHHHHHHHTTCEEEEE-----EEEECHHHHHHHHHHHTTCSEEEEES
T ss_pred             HHHHHHHHHHHHCCCEEEEE-----EEECCHHHHHHHHHHCCCCCEEEEEC
T ss_conf             99999999887659769999-----99466899998886315678799806


No 266
>>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5; 2.73A {Saccharopolyspora erythraea} (A:550-674,A:746-852)
Probab=22.34  E-value=48  Score=13.65  Aligned_cols=19  Identities=21%  Similarity=0.079  Sum_probs=14.3

Q ss_pred             EEECCCCCCHHHHHHHHHH
Q ss_conf             9871899899999999999
Q gi|254780570|r  156 AVPVSSQDTESSLSQKVLS  174 (205)
Q Consensus       156 ~~~i~~~d~~~~l~~rv~~  174 (205)
                      .++|.|+.+...+.+++..
T Consensus       196 fiEiGP~~~L~~~~~~~l~  214 (232)
T 2hg4_A          196 FVEVSPHPVLTVGIEATLD  214 (232)
T ss_dssp             EEECSSSCSSHHHHHHHHH
T ss_pred             EEEECCCHHHHHHHHHHHH
T ss_conf             9994968899999999987


No 267
>>1x3l_A Hypothetical protein PH0495; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.10A {Pyrococcus horikoshii OT3} (A:23-266)
Probab=22.32  E-value=42  Score=14.02  Aligned_cols=71  Identities=10%  Similarity=0.049  Sum_probs=31.3

Q ss_pred             CCEEEEEECCCCHHH--HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEC--CCCCCCCCHHHHHHHHC
Q ss_conf             665999976985018--99999997399984799999768888788899860895046301--32332210124321000
Q gi|254780570|r    3 RKNIVIFISGEGTNM--LSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPY--KDYISRREHEKAILMQL   78 (205)
Q Consensus         3 k~riavl~SG~Gsnl--~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~--~~~~~~~~~~~~l~~~l   78 (205)
                      ..|+.|++-|.....  +++.+.     ++..--.|++......     ...++.++.=.+  -+..+ -..-+++++.+
T Consensus        26 ~~~i~vvg~GKAa~~MA~a~~~~-----lg~~~Givv~~~g~~~-----~~~~i~v~ea~HP~Pd~~s-~~Aa~~il~~~   94 (244)
T 1x3l_A           26 KGKVYVIALGKAACEMARAIEDI-----LDVEDGVAVTKYGYGK-----ELKRIKVIEAGHPIPDEKS-ILGAKEALSIL   94 (244)
T ss_dssp             CSCEEEEEESTTHHHHHHHHHHH-----SCCSEEEEEEETTCCC-----CCSSSEEEEECSSSCCHHH-HHHHHHHHHHH
T ss_pred             CCCEEEEEECHHHHHHHHHHHHH-----CCCCCCEEEECCCCCC-----CCCCEEEEECCCCCCCHHH-HHHHHHHHHHH
T ss_conf             89889999868999999999997-----1999868995886677-----7877179977899898778-99999999999


Q ss_pred             CCCCCE
Q ss_conf             123430
Q gi|254780570|r   79 SSIQPD   84 (205)
Q Consensus        79 ~~~~~D   84 (205)
                      ++..+|
T Consensus        95 ~~~~~~  100 (244)
T 1x3l_A           95 NRAREN  100 (244)
T ss_dssp             HHCCTT
T ss_pred             HHCCCC
T ss_conf             708987


No 268
>>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate guanyltransferase, structural genomics; 2.20A {Thermus thermophilus HB8} (A:1-263)
Probab=22.20  E-value=31  Score=14.93  Aligned_cols=19  Identities=16%  Similarity=0.518  Sum_probs=15.8

Q ss_pred             CCCEEEEEECCCCHHHHHH
Q ss_conf             8665999976985018999
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSL   20 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~I   20 (205)
                      |+++.+||+.|.||-|..+
T Consensus         1 M~mkavILAaG~GtRl~pl   19 (263)
T 2cu2_A            1 MKTYALVMAGGRGERLWPL   19 (263)
T ss_dssp             CCEEEEEECCCCCGGGTTT
T ss_pred             CCCEEEEECCCCCCCCCCC
T ss_conf             9812899679730437875


No 269
>>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative; 2.19A {Bacteroides fragilis nctc 9343} (A:1-167)
Probab=22.13  E-value=49  Score=13.59  Aligned_cols=51  Identities=22%  Similarity=0.203  Sum_probs=25.7

Q ss_pred             CCCCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEE
Q ss_conf             9866599997698-50189999999739998479999976888878889986089504
Q gi|254780570|r    1 MIRKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTF   57 (205)
Q Consensus         1 M~k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~   57 (205)
                      |.++||+|+..|+ |+.+   ...+...  .+++..+ .++.....-..++..+....
T Consensus         8 ~~~~~I~IiG~G~~G~~l---a~~l~~~--g~~v~~~-~~~~~~~~~~~~~~~~~~~~   59 (167)
T 3d1l_A            8 IEDTPIVLIGAGNLATNL---AKALYRK--GFRIVQV-YSRTEESARELAQKVEAEYT   59 (167)
T ss_dssp             GGGCCEEEECCSHHHHHH---HHHHHHH--TCCEEEE-ECSSHHHHHHHHHHTTCEEE
T ss_pred             CCCCEEEEECCHHHHHHH---HHHHHHC--CCCEEEE-ECCCHHHHHHHHHHCCCEEE
T ss_conf             469989998311999999---9999988--9977999-78999999999986698563


No 270
>>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens} (A:1-127)
Probab=22.10  E-value=15  Score=17.14  Aligned_cols=20  Identities=15%  Similarity=0.031  Sum_probs=13.2

Q ss_pred             CHHHHHHHHCCCCCCEEEEE
Q ss_conf             01243210001234303643
Q gi|254780570|r   69 EHEKAILMQLSSIQPDLICL   88 (205)
Q Consensus        69 ~~~~~l~~~l~~~~~Dliv~   88 (205)
                      .++....+.+++++||+++.
T Consensus        78 ~~~~~~~~~~~~~~~d~~i~   97 (127)
T 3elb_A           78 APYVTTLETLDKYNCDFCVH   97 (127)
T ss_dssp             CCSSCCHHHHHHTTCSEEEE
T ss_pred             CCCCCHHHHHHHHCCCEEEE
T ss_conf             88646799999847968996


No 271
>>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural genomics, JCSG, protein structure initiative, PSI; HET: NAP; 1.78A {Thermotoga maritima MSB8} (A:1-193)
Probab=21.99  E-value=49  Score=13.57  Aligned_cols=79  Identities=8%  Similarity=-0.028  Sum_probs=42.8

Q ss_pred             CCC--HHHHHHHHHHHCCCCCCEEEEEEECCCC---CH----HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             985--0189999999739998479999976888---87----88899860895046301323322101243210001234
Q gi|254780570|r   12 GEG--TNMLSLIQATKKNDYPAEIVGVFSDNSN---AQ----GLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus        12 G~G--snl~~Il~~~~~~~~~~eI~~Visn~~d---a~----~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      |.|  ..+..+++..     +..=++++|+..-   ++    ..+..++.++.+..++.-......+.=.++.+..++.+
T Consensus        27 g~g~~~~l~~~l~~~-----g~~~vlivtd~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  101 (193)
T 1vlj_A           27 GRGTIPKIGEEIKNA-----GIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEK  101 (193)
T ss_dssp             STTCGGGHHHHHHHT-----TCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHC-----CCCEEEEEECCCHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             369999999999966-----998589998875788762999999999865991999867169999999999999861358


Q ss_pred             CEEEEEEEEEEEC
Q ss_conf             3036431122205
Q gi|254780570|r   83 PDLICLAGYMRLL   95 (205)
Q Consensus        83 ~Dliv~~g~~~il   95 (205)
                      +|.|+-.|=+..+
T Consensus       102 ~D~IIaiGGGs~~  114 (193)
T 1vlj_A          102 VEAVLGVGGGSVV  114 (193)
T ss_dssp             CSEEEEEESHHHH
T ss_pred             CCEEEECCCCCHH
T ss_conf             8757523886311


No 272
>>2b8n_A Glycerate kinase, putative; TM1585, glycerate kinase (EC 2.7.1.31), structural genomics, joint center for structural genomics, JCSG; 2.53A {Thermotoga maritima MSB8} (A:35-261)
Probab=21.98  E-value=43  Score=13.94  Aligned_cols=74  Identities=8%  Similarity=0.128  Sum_probs=31.9

Q ss_pred             CCEEEEEECCCCHH--HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEC--CCCCCCCCHHHHHHHHC
Q ss_conf             66599997698501--899999997399984799999768888788899860895046301--32332210124321000
Q gi|254780570|r    3 RKNIVIFISGEGTN--MLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPY--KDYISRREHEKAILMQL   78 (205)
Q Consensus         3 k~riavl~SG~Gsn--l~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~--~~~~~~~~~~~~l~~~l   78 (205)
                      ..|+.|++-|..+.  ++++.+.+...   ..--.|++.......    ...++.++.=.+  -+..+ -...+++++.+
T Consensus        15 ~~~v~vva~GKAa~~MA~a~~~~lg~~---~~~G~vv~~~g~~~~----~~~~i~v~~a~HP~Pd~~s-~~Aa~~il~~~   86 (227)
T 2b8n_A           15 LDRVILVAVGKAAWRXAKAAYEVLGKK---IRKGVVVTKYGHSEG----PIDDFEIYEAGHPVPDENT-IKTTRRVLELV   86 (227)
T ss_dssp             CCSEEEEEESTTHHHHHHHHHHHHGGG---EEEEEEEEETTCCCS----CCTTCEEEEECSSSCCHHH-HHHHHHHHHHH
T ss_pred             CCCEEEEEEHHHHHHHHHHHHHHHCCC---CCEEEEEECCCCCCC----CCCCEEEEECCCCCCCHHH-HHHHHHHHHHH
T ss_conf             998899998389999999999972767---770699958986778----8887389978899998789-99999999999


Q ss_pred             CCCCCE
Q ss_conf             123430
Q gi|254780570|r   79 SSIQPD   84 (205)
Q Consensus        79 ~~~~~D   84 (205)
                      ++..+|
T Consensus        87 ~~~~~~   92 (227)
T 2b8n_A           87 DQLNEN   92 (227)
T ss_dssp             SSCCTT
T ss_pred             HCCCCC
T ss_conf             618998


No 273
>>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* (A:488-615,A:751-788)
Probab=21.88  E-value=49  Score=13.56  Aligned_cols=15  Identities=20%  Similarity=0.419  Sum_probs=12.4

Q ss_pred             CCCEEEEEECCCCHH
Q ss_conf             866599997698501
Q gi|254780570|r    2 IRKNIVIFISGEGTN   16 (205)
Q Consensus         2 ~k~riavl~SG~Gsn   16 (205)
                      .++|++++++|.|+-
T Consensus         1 s~~kia~lFpGQGsq   15 (166)
T 2vz8_A            1 SKRPVWFICSGMGAQ   15 (166)
T ss_dssp             SCCCEEEEECCSSCC
T ss_pred             CCCCEEEEECCCCCC
T ss_conf             899879982898731


No 274
>>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV} (A:1-146,A:319-398)
Probab=21.78  E-value=49  Score=13.54  Aligned_cols=80  Identities=11%  Similarity=0.070  Sum_probs=40.7

Q ss_pred             CCC-CEEEEEECCCCH--HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH-HH
Q ss_conf             986-659999769850--18999999973999847999997688887888998608950463013233221012432-10
Q gi|254780570|r    1 MIR-KNIVIFISGEGT--NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAI-LM   76 (205)
Q Consensus         1 M~k-~riavl~SG~Gs--nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l-~~   76 (205)
                      |.+ .|+++...|..+  .....+.+..... ..+|+.|++.++ ......++++++|....    +.+   +.... .+
T Consensus         9 ~~~~lrvgiIG~G~~g~~~~~~~~~a~~~~~-~~~Vvgv~d~~~-~~~~~~a~~~~~~~~r~----y~d---~~~~~~~e   79 (226)
T 3dty_A            9 IPQPIRWAXVGGGSQSQIGYIHRCAALRDNT-FVLVAGAFDIDP-IRGSAFGEQLGVDSERC----YAD---YLSXFEQE   79 (226)
T ss_dssp             SCSCEEEEEEECCTTCSSHHHHHHHHHGGGS-EEEEEEECCSSH-HHHHHHHHHTTCCGGGB----CSS---HHHHHHHH
T ss_pred             CCCCEEEEEECCCHHHHHHHHHHHHHCCCCC-CEEEEEEECCCH-HHHHHHHHHHCCCCCEE----CCC---HHHHHHHH
T ss_conf             8997089999368647645999999614699-769999968999-99999999868894301----389---99999988


Q ss_pred             HCCCCCCEEEEEE
Q ss_conf             0012343036431
Q gi|254780570|r   77 QLSSIQPDLICLA   89 (205)
Q Consensus        77 ~l~~~~~Dliv~~   89 (205)
                      .+..-++|+|+.+
T Consensus        80 l~~~~~iD~V~I~   92 (226)
T 3dty_A           80 ARRADGIQAVSIA   92 (226)
T ss_dssp             TTCTTCCSEEEEE
T ss_pred             HHCCCCCEEEEEC
T ss_conf             6368984089976


No 275
>>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} (A:)
Probab=21.29  E-value=35  Score=14.60  Aligned_cols=18  Identities=22%  Similarity=0.564  Sum_probs=14.8

Q ss_pred             CCCEEEEEECCCCHHHHH
Q ss_conf             866599997698501899
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLS   19 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~   19 (205)
                      |+++.+||+.|.||-|..
T Consensus         1 M~m~aIILAaG~GsRl~p   18 (293)
T 1fxo_A            1 MKRKGIILAGGSGTRLHP   18 (293)
T ss_dssp             -CEEEEEECCCCCTTTTT
T ss_pred             CCCEEEEECCCCCCCCCC
T ss_conf             981399988867777883


No 276
>>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} (A:1-248,A:453-480)
Probab=21.28  E-value=50  Score=13.47  Aligned_cols=25  Identities=16%  Similarity=0.162  Sum_probs=9.3

Q ss_pred             EEEEECCCCCHHHHHHHHCCCCEEE
Q ss_conf             9999768888788899860895046
Q gi|254780570|r   34 VGVFSDNSNAQGLVKARKEKVPTFP   58 (205)
Q Consensus        34 ~~Visn~~da~~l~~a~~~~Ip~~~   58 (205)
                      ++||+|---....+.|++.|||.++
T Consensus       112 ~cIV~D~f~~wa~~vA~~lGIP~~~  136 (276)
T 2vch_A          112 TALVVDLFGTDAFDVAVEFHVPPYI  136 (276)
T ss_dssp             SEEEECTTCGGGHHHHHHTTCCEEE
T ss_pred             CEEEECCCCHHHHHHHHHHCCCCEE
T ss_conf             5366435246899999984877134


No 277
>>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, alternative splicing, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* (A:159-289)
Probab=21.16  E-value=51  Score=13.46  Aligned_cols=78  Identities=19%  Similarity=0.034  Sum_probs=38.0

Q ss_pred             EEEC-CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEE
Q ss_conf             9976-985018999999973999847999997688887888998608950463013233221012432100012343036
Q gi|254780570|r    8 IFIS-GEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLI   86 (205)
Q Consensus         8 vl~S-G~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dli   86 (205)
                      |++. |.|.--...+...+.  ..+++..+.++.   .-++++++.+-... +++.+.    +..+++.+......+|.+
T Consensus         8 Vli~gg~g~vG~~~iqla~~--~g~~vi~~~~~~---~~~~~~~~~ga~~~-i~~~~~----~~~~~~~~~~~~~~~d~v   77 (131)
T 2j8z_A            8 VLIHAGLSGVGTAAIQLTRM--AGAIPLVTAGSQ---KKLQMAEKLGAAAG-FNYKKE----DFSEATLKFTKGAGVNLI   77 (131)
T ss_dssp             EEESSTTSHHHHHHHHHHHH--TTCEEEEEESCH---HHHHHHHHHTCSEE-EETTTS----CHHHHHHHHTTTSCEEEE
T ss_pred             EEEEECCCCHHEEEEECCCC--CCCCCEEEEECH---HHHHHHHHHCCCEE-ECCCCC----CHHHHHHHHHCCCCCEEE
T ss_conf             99962897531002341123--244426998104---54445665133113-202452----168999998579983799


Q ss_pred             EEEEEEEEC
Q ss_conf             431122205
Q gi|254780570|r   87 CLAGYMRLL   95 (205)
Q Consensus        87 v~~g~~~il   95 (205)
                      +.++-...+
T Consensus        78 ~~~~g~~~~   86 (131)
T 2j8z_A           78 LDCIGGSYW   86 (131)
T ss_dssp             EESSCGGGH
T ss_pred             EECCCHHHH
T ss_conf             977756899


No 278
>>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A (A:)
Probab=21.02  E-value=51  Score=13.44  Aligned_cols=37  Identities=22%  Similarity=0.286  Sum_probs=20.3

Q ss_pred             CCC-CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             986-6599997698501899999997399984799999768
Q gi|254780570|r    1 MIR-KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDN   40 (205)
Q Consensus         1 M~k-~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~   40 (205)
                      |+| .||+|.  |.|+--.+++.....+.. .+++++=.|.
T Consensus         1 m~~~~KI~Ii--GaG~vg~~l~~~l~~~~i-~el~L~D~~~   38 (317)
T 2ewd_A            1 MIERRKIAVI--GSGQIGGNIAYIVGKDNL-ADVVLFDIAE   38 (317)
T ss_dssp             CCCCCEEEEE--CCSHHHHHHHHHHHHHTC-CEEEEECSSS
T ss_pred             CCCCCEEEEE--CCCHHHHHHHHHHHHCCC-CEEEEECCCC
T ss_conf             9999979998--989899999999982899-8799985899


No 279
>>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransferase; acetyltransferase, bifunctional, crystallography, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} (A:1-232)
Probab=20.84  E-value=49  Score=13.57  Aligned_cols=37  Identities=19%  Similarity=0.243  Sum_probs=22.2

Q ss_pred             CCCCEEEEEECCCCHHH-----------------HHHHHHHHCCCCCCEEEEEEE
Q ss_conf             98665999976985018-----------------999999973999847999997
Q gi|254780570|r    1 MIRKNIVIFISGEGTNM-----------------LSLIQATKKNDYPAEIVGVFS   38 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl-----------------~~Il~~~~~~~~~~eI~~Vis   38 (205)
                      |.+.+.+||+.|.||=|                 +-.++...+... -+++.|..
T Consensus         9 ~~~~~aIIlAaG~GsRl~p~tPK~li~v~Gkpli~~~i~~l~~~~~-~~iiiv~~   62 (232)
T 1hm9_A            9 HHSNFAIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQP-EKTVTVVG   62 (232)
T ss_dssp             --CEEEEEECCCCCGGGCCSSCGGGSEETTEEHHHHHHHHHHTTCC-SEEEEEEC
T ss_pred             CCCCEEEEECCCCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHCCC-CEEEEEEC
T ss_conf             6788699989888887698998677489980099999999997799-87999959


No 280
>>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} (A:1-162)
Probab=20.76  E-value=52  Score=13.40  Aligned_cols=55  Identities=11%  Similarity=0.009  Sum_probs=31.9

Q ss_pred             CCEEEEEECCC-CHHHH-HHHHHHHCCCCCCEEEEEEECCC-CC-----HHHHHHHHCCCCEEEEECC
Q ss_conf             66599997698-50189-99999973999847999997688-88-----7888998608950463013
Q gi|254780570|r    3 RKNIVIFISGE-GTNML-SLIQATKKNDYPAEIVGVFSDNS-NA-----QGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~-~Il~~~~~~~~~~eI~~Visn~~-da-----~~l~~a~~~~Ip~~~i~~~   62 (205)
                      .+|+++++||+ .|.+. .++..     ...++.++.-+.. ..     ..-+.++.++++.......
T Consensus         2 ~~kv~v~~SGG~DS~~~l~ll~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~   64 (162)
T 2pg3_A            2 XKRAVVVFSGGQDSTTCLIQALQ-----DYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLDV   64 (162)
T ss_dssp             CCEEEEECCSSHHHHHHHHHHHH-----HCSEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf             98699983782889999999998-----5996999999889861999999998887653011001147


No 281
>>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} (A:194-372)
Probab=20.71  E-value=52  Score=13.40  Aligned_cols=75  Identities=13%  Similarity=0.111  Sum_probs=38.0

Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEEE---CCCCC--HHHHHHHHCCCCEEEEECCCCCCCCCHH--HHHHHHCCCCCCEEEE
Q ss_conf             018999999973999847999997---68888--7888998608950463013233221012--4321000123430364
Q gi|254780570|r   15 TNMLSLIQATKKNDYPAEIVGVFS---DNSNA--QGLVKARKEKVPTFPIPYKDYISRREHE--KAILMQLSSIQPDLIC   87 (205)
Q Consensus        15 snl~~Il~~~~~~~~~~eI~~Vis---n~~da--~~l~~a~~~~Ip~~~i~~~~~~~~~~~~--~~l~~~l~~~~~Dliv   87 (205)
                      ..++.+.+...+.+-   ++.++-   .+..+  ...++|++.|+|++.-...+..-.+.+.  ....-.-.-.+.|+|+
T Consensus         8 ~~i~~~~~~L~~A~r---PvIi~G~~~~~~~a~~~l~~lae~~giPv~~~~~~kg~~p~~~p~~~g~~~~~~~~~aDlil   84 (179)
T 2c31_A            8 DAIARAADLIKNAKR---PVIMLGKGAAYAQCDDEIRALVEETGIPFLPMGMAKGLLPDNHPQSAAATRAFALAQCDVCV   84 (179)
T ss_dssp             HHHHHHHHHHHTCSS---EEEEECHHHHHHTCHHHHHHHHHHHTCCEEECGGGTTSSCTTCTTBCGGGHHHHHHHCSEEE
T ss_pred             HHHHHHHHHHHHCCC---CEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
T ss_conf             999999999861689---58999623113447899988787418651222012455664343221000132224551210


Q ss_pred             EEEEE
Q ss_conf             31122
Q gi|254780570|r   88 LAGYM   92 (205)
Q Consensus        88 ~~g~~   92 (205)
                      +.|..
T Consensus        85 ~iG~~   89 (179)
T 2c31_A           85 LIGAR   89 (179)
T ss_dssp             EESCC
T ss_pred             CCCCC
T ss_conf             23665


No 282
>>3ksm_A ABC-type sugar transport system, periplasmic component; PSI- II, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis kctc 2396} (A:1-106,A:243-276)
Probab=20.63  E-value=52  Score=13.38  Aligned_cols=15  Identities=27%  Similarity=0.454  Sum_probs=10.6

Q ss_pred             CCCCCCCCCCCCHHC
Q ss_conf             333244421210000
Q gi|254780570|r  115 LPLFPGLHTHRRVLQ  129 (205)
Q Consensus       115 LP~yrG~~~~~~ai~  129 (205)
                      =|.|.|.-+.++|+.
T Consensus       106 D~~~~~~~~~~~~~~  120 (140)
T 3ksm_A          106 DPEYXGYLAVQRALD  120 (140)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
T ss_conf             499999999999999


No 283
>>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} (A:)
Probab=20.52  E-value=52  Score=13.37  Aligned_cols=30  Identities=13%  Similarity=0.079  Sum_probs=15.6

Q ss_pred             EEEEEEECCCCC----HHHHHHHHCCCCEEEEEC
Q ss_conf             799999768888----788899860895046301
Q gi|254780570|r   32 EIVGVFSDNSNA----QGLVKARKEKVPTFPIPY   61 (205)
Q Consensus        32 eI~~Visn~~da----~~l~~a~~~~Ip~~~i~~   61 (205)
                      .++.++|.....    ..++.|++.|+++..+..
T Consensus        81 ~~vI~iS~sG~t~~~~~~~~~ak~~g~~ii~IT~  114 (186)
T 1m3s_A           81 DLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTI  114 (186)
T ss_dssp             CEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             8899981899864678999999986996999989


No 284
>>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- MESO-diaminopimelate ligase; structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis MC58} (A:1-105)
Probab=20.45  E-value=52  Score=13.36  Aligned_cols=69  Identities=17%  Similarity=0.107  Sum_probs=36.9

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEC-CCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             6659999769850189999999739998479999976-888878889986089504630132332210124321000123
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSD-NSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn-~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      .||+.|+.- .+|.+-++-+...+.  .++|.  .+| +.+....++.++.|++++.-..             .+.+...
T Consensus         4 ~k~v~viG~-G~sG~salA~~L~~~--G~~V~--~~D~~~~~~~~~~L~~~gi~~~~g~~-------------~~~~~~~   65 (105)
T 3eag_A            4 XKHIHIIGI-GGTFXGGLAAIAKEA--GFEVS--GCDAKXYPPXSTQLEALGIDVYEGFD-------------AAQLDEF   65 (105)
T ss_dssp             CCEEEEESC-CSHHHHHHHHHHHHT--TCEEE--EEESSCCTTHHHHHHHTTCEEEESCC-------------GGGGGSC
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHHC--CCEEE--EEECCCCCHHHHHHHHCCCEEECCCC-------------HHHCCCC
T ss_conf             778999985-789999999999978--99399--99799995789999978899987889-------------7884665


Q ss_pred             CCEEEEEE
Q ss_conf             43036431
Q gi|254780570|r   82 QPDLICLA   89 (205)
Q Consensus        82 ~~Dliv~~   89 (205)
                      ++|++|..
T Consensus        66 ~~d~vV~S   73 (105)
T 3eag_A           66 KADVYVIG   73 (105)
T ss_dssp             CCSEEEEC
T ss_pred             CCCEEEEE
T ss_conf             56422233


No 285
>>1di6_A MOGA, molybdenum cofactor biosythetic enzyme; MOCO, MOCO biosynthesis, gephyrin; 1.45A {Escherichia coli} (A:)
Probab=20.31  E-value=53  Score=13.34  Aligned_cols=13  Identities=15%  Similarity=0.120  Sum_probs=10.4

Q ss_pred             CCCCEEEEEECCC
Q ss_conf             9866599997698
Q gi|254780570|r    1 MIRKNIVIFISGE   13 (205)
Q Consensus         1 M~k~riavl~SG~   13 (205)
                      |.+.|++|+..|.
T Consensus         1 ~r~~rv~ii~tGd   13 (195)
T 1di6_A            1 MATLRIGLVSISD   13 (195)
T ss_dssp             -CCEEEEEEEEEC
T ss_pred             CCCEEEEEEEECC
T ss_conf             9831899999677


No 286
>>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, PSI; HET: MSE; 2.00A {Enterococcus faecalis V583} (A:1-182)
Probab=20.18  E-value=53  Score=13.32  Aligned_cols=32  Identities=13%  Similarity=0.164  Sum_probs=17.8

Q ss_pred             CCCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             866599997698-5018999999973999847999997
Q gi|254780570|r    2 IRKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFS   38 (205)
Q Consensus         2 ~k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Vis   38 (205)
                      .++||+|+.+|. |+-+-..+.   +.  ..+|.++..
T Consensus         2 ~~~kI~IiGaG~~G~~~A~~La---~~--G~~V~~~~~   34 (182)
T 2ew2_A            2 NAXKIAIAGAGAXGSRLGIXLH---QG--GNDVTLIDQ   34 (182)
T ss_dssp             --CEEEEECCSHHHHHHHHHHH---HT--TCEEEEECS
T ss_pred             CCCEEEEECCCHHHHHHHHHHH---HC--CCCEEEEEC
T ss_conf             9888999991999999999999---68--996799978


Done!