HHsearch results for GI: 254780570 and protein with PDBid: 1fmt_A

>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A*
Probab=100.00  E-value=1.1e-34  Score=258.42  Aligned_cols=179  Identities=21%  Similarity=0.305  Sum_probs=150.5

Q ss_pred             CCEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEEC--CCCC--------HHHHHHHHCCCCEEEEECCCCCCCCCH
Q ss_conf             665999976985--0189999999739998479999976--8888--------788899860895046301323322101
Q gi|254780570|r    3 RKNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSD--NSNA--------QGLVKARKEKVPTFPIPYKDYISRREH   70 (205)
Q Consensus         3 k~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn--~~da--------~~l~~a~~~~Ip~~~i~~~~~~~~~~~   70 (205)
                      ++||++|+|..-  .+|++|++    .  +++|++|+|.  ++..        ..-+.|+++|||++..+..       .
T Consensus         3 ~mkI~f~Gs~~~a~~~L~~L~~----~--~~~i~~VvT~pd~~~grg~~~~~~~v~~~A~~~~i~~~~~~~~-------~   69 (314)
T 1fmt_A            3 SLRIIFAGTPDFAARHLDALLS----S--GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSL-------R   69 (314)
T ss_dssp             CCEEEEEECSHHHHHHHHHHHH----T--TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCS-------C
T ss_pred             CCEEEEECCCHHHHHHHHHHHH----C--CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC-------C
T ss_conf             6289998898899999999997----8--9977999909998556888488997999999859984035234-------6


Q ss_pred             HHHHHHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCC
Q ss_conf             24321000123430364311222057213210665423135322333244421210000246534453033123218662
Q gi|254780570|r   71 EKAILMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGP  150 (205)
Q Consensus        71 ~~~l~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~  150 (205)
                      +....+.+++.++|++++++|++++|+++++.++.++||+||||||+|||++|++|||.||++++|+|+|+|++++|+||
T Consensus        70 ~~~~~~~~~~~~~dl~i~~~~~~iip~~~l~~~~~g~iN~H~slLP~yRG~~pi~wail~g~~~~Gvti~~~~~~~D~G~  149 (314)
T 1fmt_A           70 PQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGD  149 (314)
T ss_dssp             SHHHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSSTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSC
T ss_pred             CHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCC
T ss_conf             28899999851999999971264699999857897778255554777667588999997799753159999626756777


Q ss_pred             EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf             67789987189989999999999999999999999998695699
Q gi|254780570|r  151 IIAQAAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSN  194 (205)
Q Consensus       151 Ii~q~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~  194 (205)
                      |+.|++++|.++||..+|++|+.....+++.+++..+.++....
T Consensus       150 Ii~q~~~~i~~~~t~~~L~~k~~~~~~~ll~~~l~~l~~~~~~~  193 (314)
T 1fmt_A          150 MLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKP  193 (314)
T ss_dssp             EEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf             14789963045653899999987642156688999986699641