HHsearch results for GI: 254780570 and protein with PDBid: 1fmt_A
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A*
Probab=100.00 E-value=1.1e-34 Score=258.42 Aligned_cols=179 Identities=21% Similarity=0.305 Sum_probs=150.5
Q ss_pred CCEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEEC--CCCC--------HHHHHHHHCCCCEEEEECCCCCCCCCH
Q ss_conf 665999976985--0189999999739998479999976--8888--------788899860895046301323322101
Q gi|254780570|r 3 RKNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSD--NSNA--------QGLVKARKEKVPTFPIPYKDYISRREH 70 (205)
Q Consensus 3 k~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn--~~da--------~~l~~a~~~~Ip~~~i~~~~~~~~~~~ 70 (205)
++||++|+|..- .+|++|++ . +++|++|+|. ++.. ..-+.|+++|||++..+.. .
T Consensus 3 ~mkI~f~Gs~~~a~~~L~~L~~----~--~~~i~~VvT~pd~~~grg~~~~~~~v~~~A~~~~i~~~~~~~~-------~ 69 (314)
T 1fmt_A 3 SLRIIFAGTPDFAARHLDALLS----S--GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSL-------R 69 (314)
T ss_dssp CCEEEEEECSHHHHHHHHHHHH----T--TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCS-------C
T ss_pred CCEEEEECCCHHHHHHHHHHHH----C--CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC-------C
T ss_conf 6289998898899999999997----8--9977999909998556888488997999999859984035234-------6
Q ss_pred HHHHHHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 24321000123430364311222057213210665423135322333244421210000246534453033123218662
Q gi|254780570|r 71 EKAILMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGP 150 (205)
Q Consensus 71 ~~~l~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~ 150 (205)
+....+.+++.++|++++++|++++|+++++.++.++||+||||||+|||++|++|||.||++++|+|+|+|++++|+||
T Consensus 70 ~~~~~~~~~~~~~dl~i~~~~~~iip~~~l~~~~~g~iN~H~slLP~yRG~~pi~wail~g~~~~Gvti~~~~~~~D~G~ 149 (314)
T 1fmt_A 70 PQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGD 149 (314)
T ss_dssp SHHHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSSTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSC
T ss_pred CHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCC
T ss_conf 28899999851999999971264699999857897778255554777667588999997799753159999626756777
Q ss_pred EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 67789987189989999999999999999999999998695699
Q gi|254780570|r 151 IIAQAAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSN 194 (205)
Q Consensus 151 Ii~q~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~ 194 (205)
|+.|++++|.++||..+|++|+.....+++.+++..+.++....
T Consensus 150 Ii~q~~~~i~~~~t~~~L~~k~~~~~~~ll~~~l~~l~~~~~~~ 193 (314)
T 1fmt_A 150 MLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKP 193 (314)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 14789963045653899999987642156688999986699641