HHSEARCH alignment of GI: 254780570 and SCOP domain: d1fmta2

Alignment
>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=2e-35  Score=261.80  Aligned_cols=182  Identities=21%  Similarity=0.283  Sum_probs=151.1

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC----------CHHHHHHHHCCCCEEEEECCCCCCCCCHHH
Q ss_conf             6659999769850189999999739998479999976888----------878889986089504630132332210124
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSN----------AQGLVKARKEKVPTFPIPYKDYISRREHEK   72 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~d----------a~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~   72 (205)
                      ++||++|+|  +.....++++..+.  +++|++|+|..++          ......+...++|.......       .++
T Consensus         3 ~mKI~f~G~--~~~~~~~L~~L~~~--~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~   71 (206)
T d1fmta2           3 SLRIIFAGT--PDFAARHLDALLSS--GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSL-------RPQ   71 (206)
T ss_dssp             CCEEEEEEC--SHHHHHHHHHHHHT--TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCS-------CSH
T ss_pred             CCEEEEECC--CHHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC-------CCH
T ss_conf             748999889--88999999999968--9977999969983013676223362321010037653222222-------211


Q ss_pred             HHHHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEE
Q ss_conf             32100012343036431122205721321066542313532233324442121000024653445303312321866267
Q gi|254780570|r   73 AILMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPII  152 (205)
Q Consensus        73 ~l~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii  152 (205)
                      ...+.++..++|+++++||++++|+++++.|+.++||+|||+||+|||.+|++||+.||++++|+|+|+|++++|+|+||
T Consensus        72 ~~~~~~~~~~~d~~v~~~~~~ii~~~il~~~k~g~iN~Hps~LP~yRG~~pi~wai~nge~~~GvT~h~i~~~iD~G~Ii  151 (206)
T d1fmta2          72 ENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDML  151 (206)
T ss_dssp             HHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSSTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEE
T ss_pred             HHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEECEEEEEECCCCCHHHHH
T ss_conf             46777764133278864122136654675387774525823567652000132588749823530688861555757764


Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             7899871899899999999999999999999999986956998
Q gi|254780570|r  153 AQAAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNS  195 (205)
Q Consensus       153 ~q~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~  195 (205)
                      .|++++|.++||..+|++|+..++.++++++|+.+.+|++.-.
T Consensus       152 ~q~~~~i~~~dt~~~l~~k~~~~~~~l~~~~i~~i~~~~~~~~  194 (206)
T d1fmta2         152 YKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPE  194 (206)
T ss_dssp             EEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCB
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             3001344335659999999999999999999999984998426


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]