HHSEARCH alignment of GI: 254780570 and SCOP domain: d1zgha2

Alignment
>d1zgha2 c.65.1.1 (A:1-164) Methionyl-tRNAfmet formyltransferase {Clostridium thermocellum [TaxId: 1515]}
Probab=99.91  E-value=7.5e-25  Score=188.87  Aligned_cols=114  Identities=15%  Similarity=0.289  Sum_probs=100.1

Q ss_pred             HHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEE
Q ss_conf             10001234303643112220572132106654231353223332444212100002465344530331232186626778
Q gi|254780570|r   75 LMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQ  154 (205)
Q Consensus        75 ~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q  154 (205)
                      .+.+++.+||+++++||++|+|+++++.+  +++|+|||+||+|||.+|+.||+.+|++++|+|+|+|++++|+|+|+.|
T Consensus        40 ~~~i~~~~~D~ii~~g~~~ii~~~il~~~--~~in~H~s~LP~yRG~~p~~wai~~~~~~~Gvtih~~~~~iD~G~Ii~q  117 (164)
T d1zgha2          40 FEKVKLINPEYILFPHWSWIIPKEIFENF--TCVVFHMTDLPFGRGGSPLQNLIERGIKKTKISAIKVDGGIDTGDIFFK  117 (164)
T ss_dssp             HHHHHHHCCSEEEESSCCSCCCHHHHTTS--CEEEEESSCTTTTEESCHHHHHHHTTCCEEEEEEEECCSSSSCSCEEEE
T ss_pred             HHHHHHCCCCEEEEECCCCCCCHHHHHHC--CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
T ss_conf             99999609999999370230389999409--9820897801244233533310012335542036774067886778999


Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             99871899899999999999999999999999986956998
Q gi|254780570|r  155 AAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNS  195 (205)
Q Consensus       155 ~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~  195 (205)
                      +.+++.  ||.+++..|...   .++.+.++.+++++....
T Consensus       118 ~~~~i~--~~~~~~~~~~~~---~~~~~~i~~i~~~~~~~~  153 (164)
T d1zgha2         118 RDLDLY--GTAEEIFMRASK---IIFNDMIPELLTKRPVPQ  153 (164)
T ss_dssp             EEEECC--SCHHHHHHHHHH---HHHHTHHHHHHHHCCCCB
T ss_pred             EEECCC--CCHHHHHHHHHH---HHHHHHHHHHHCCCCEEE
T ss_conf             997789--999999999999---999999999986998117


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Clostridium thermocellum [TaxId: 1515]