HHsearch alignment for GI: 254780571 and conserved domain: COG3847

>COG3847 Flp Flp pilus assembly protein, pilin Flp [Intracellular trafficking and secretion].

Probab=97.76  E-value=0.00012  Score=46.75  Aligned_cols=36  Identities=28%  Similarity=0.524  Sum_probs=30.1

Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             799999751244554899999999999999999999
Q gi|254780571|r    4 IKNYILRFLSRENGVVAVEMAIILPILLLIYMAVYE   39 (182)
Q Consensus         4 ~~~~lrrf~rd~~G~aaVEFAli~P~ll~ll~~~~e   39 (182)
T Consensus         1 m~~~~~rF~rDE~GAtaiEYglia~lIav~ii~~~~   36 (58)
T COG3847           1 MKKLLRRFLRDEDGATAIEYGLIAALIAVVIIAGGS   36 (58)
T ss_pred             CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             917899997745651899999999999999999999