HHsearch alignment for GI: 254780571 and conserved domain: COG4970
>COG4970 FimT Tfp pilus assembly protein FimT [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=90.82 E-value=1 Score=23.04 Aligned_cols=52 Identities=25% Similarity=0.350 Sum_probs=44.2
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5124455489999999999999999999999999999999999999999985
Q gi|254780571|r 11 FLSRENGVVAVEMAIILPILLLIYMAVYEITMLYTLSKRLTRFASHMGDMVA 62 (182)
Q Consensus 11 f~rd~~G~aaVEFAli~P~ll~ll~~~~e~~~~~~~~~~l~~A~~~~ar~~~ 62 (182)
T Consensus 3 ~r~~~rGfTL~ELliviAIlAIla~~A~P~fs~~i~~~rl~s~a~eL~a~l~ 54 (181)
T COG4970 3 FRSRTRGFTLLELLIVLAILAILAVIAAPNFSQWIRSQRLRSAADELAAALQ 54 (181)
T ss_pred CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5414675049999999999999999851008888778789889999999999