HHsearch alignment for GI: 254780573 and conserved domain: COG0143
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=99.93 E-value=3.3e-23 Score=186.20 Aligned_cols=332 Identities=24% Similarity=0.261 Sum_probs=213.3
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99616788884441112799999999999997079984579960552338889999870898644884899999999999
Q gi|254780573|r 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107 (461)
Q Consensus 28 ~Y~CGpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~~~~~~~a~~~~~~f 107 (461)
T Consensus 9 VTtalpY~Ng~~HlGH~~~~l~ADv~aRy~Rl~G~~--v~fvtGtDeHGt~I~~~A~~~g~t------P~el~d~~~~~~ 80 (558)
T COG0143 9 VTTALPYPNGPPHLGHLYTYLAADVYARYLRLRGYE--VFFLTGTDEHGTKIELKAEKEGIT------PQELVDKNHEEF 80 (558)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE--EEEEECCCCCCCHHHHHHHHCCCC------HHHHHHHHHHHH
T ss_conf 955898899986413678887899999999826975--899951478777889999985999------899999999999
Q ss_pred HHHHHHHCCCCCCHHHHHHH--HHHHHHHHHHHHHHCCCCCCCCCCEEECCHHCC----CC--------C-C--------
Q ss_conf 99877626854100012356--777789999987411432012892875220024----54--------3-2--------
Q gi|254780573|r 108 VKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NY--------G-S-------- 164 (461)
Q Consensus 108 ~~d~~~L~v~~p~~~pr~t~--~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~~~~----~Y--------G-~-------- 164 (461)
T Consensus 81 ~~~~~~l~Isf-D~F~rTt~~~h~~~vq~~f~~L~~~G~I~~~~~~~~Yc~~~e~fl~dr~v~g~cp~cg~~~a~GD~Ce 159 (558)
T COG0143 81 KELFKALNISF-DNFIRTTSPEHKELVQEFFLKLYENGDIYLREYEGLYCVSCERFLPDRYVEGTCPKCGGEDARGDQCE 159 (558)
T ss_pred HHHHHHHCCCC-CEECCCCCHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCCCCCHHEECCCCCCCCCCCCCCHHH
T ss_conf 99999809854-30016897779999999999999789873144356473543564562102055898675345764343
Q ss_pred -----CCCCC---HHHHHHHHHCCCC------------------CCCCCCCCEEEEEC--------CCCCC----CEE-E
Q ss_conf -----24675---4666643210222------------------21012351266633--------77666----314-1
Q gi|254780573|r 165 -----FSRRK---IDEQKMGTRVPEK------------------YHKKNPADFILWKR--------STPME----PGW-E 205 (461)
Q Consensus 165 -----Ls~~~---~~~~~~g~r~~~~------------------~~K~~p~DFaLWK~--------~~~~e----~~w-~ 205 (461)
T Consensus 160 ~Cg~~~~P~~l~~p~~~i~g~~p~~r~~~hyFf~L~~~~~~L~~~~~~~~-~~~~p~~~~ne~~~~i~~GL~d~~IsR~~ 238 (558)
T COG0143 160 NCGRTLDPTELINPVCVISGATPEVREEEHYFFRLSKFQDKLLEWYESNP-DFIWPANRRNEVLNFLKEGLKDLSITRTD 238 (558)
T ss_pred HCCCCCCCHHCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHCCCCCCCEECCC
T ss_conf 22675792121798168647976433540599887986999999997396-54588689999999997668664314589
Q ss_pred CCCCC---CCCC-----CCCH-HHHH-HHHHC---CCC--------EE----EEEECCCCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 46776---6764-----3320-4777-78752---984--------14----8741356666875136688886408753
Q gi|254780573|r 206 SPWGR---GRPG-----WHIE-CSAM-SSHYL---GKV--------FD----IHGGGLDLIFPHHENEIAQSCCADRIEK 260 (461)
Q Consensus 206 spwG~---GRPG-----WHiE-Csam-~~~~l---g~~--------~D----IH~GG~DL~FPHHENEiAQs~a~~~~~~ 260 (461)
T Consensus 239 ~~WGipvP~~p~kv~YVWfDAligYisa~~~~~~~~~~~~~~~~W~~~~~e~vhfIGKDii~FHav~wPamL~~~~~-~l 317 (558)
T COG0143 239 LDWGIPVPGDPGKVIYVWFDALIGYISALGELAEIGDDEDFKKFWPADDTELVHFIGKDIIRFHAVYWPAMLMAAGL-PL 317 (558)
T ss_pred CCCCCCCCCCCCCEEEEEECCHHHHHHHHCCHHCCCCHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCC-CC
T ss_conf 88772579999877999634488999995412105876789863778884599996245674324578999973899-98
Q ss_pred CHHHEECCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHH------
Q ss_conf 01210034325764202233233214089985025334557779999999842-56643211450346877764------
Q gi|254780573|r 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEIL------ 333 (461)
Q Consensus 261 ~a~yWlH~G~l~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lLs-shYRspLdfS~e~L~~A~~~------ 333 (461)
T Consensus 318 P~~i~ah-g~l~~~G~KmSKSrG~~V~~~~~~~-------~~~~D~lRYyL~~~~p~~~D~dFs~~~f~~rvN~dL~n~l 389 (558)
T COG0143 318 PTRIFAH-GFLTLEGQKMSKSRGNVVDPDELLE-------QYGVDALRYYLARELPEGSDGDFSWEDFVERVNADLANKL 389 (558)
T ss_pred CCEEEEE-EEEEECCCCCCCCCCCEEEHHHHHH-------HCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 8779840-1399779412442881871799998-------7482385798887377888888899999999989988788
Q ss_pred ---HHHCCCC--------CCCCC----CCCHHHH----------HHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf ---3210000--------13510----0596776----------30211012799999999999975130
Q gi|254780573|r 334 ---LSKWPQT--------STSKG----IIDPAVL----------SALYNDLNTVSAIQALHKLARESTKN 378 (461)
Q Consensus 334 ---l~kl~~~--------~~~~~----~~~~~f~----------~AL~DDLNTp~ALa~L~~lvk~~n~~ 378 (461)
T Consensus 390 gNl~~R~l~fi~k~~~g~vp~~~~~~~~~d~~~~~~~~~~~~~~~~~~e~~~~~~Al~~i~~l~~~~N~Y 459 (558)
T COG0143 390 GNLANRTLGFINKYFDGVVPAAGAPDLEEDEELLALAREALEAVAEAMEKYEFRKALEEIMALASRANKY 459 (558)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999999975259968865455534569999999999999999998625999999999999999887