HHsearch alignment for GI: 254780573 and conserved domain: COG0525

>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=99.70  E-value=3.1e-15  Score=129.29  Aligned_cols=314  Identities=19%  Similarity=0.213  Sum_probs=206.0

Q ss_pred             EEEECCCC---EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC-----CHHHHHHHHHCCC
Q ss_conf             23304798---479996167888844411127999999999999970799845799605523-----3888999987089
Q gi|254780573|r   17 EFQAIDPS---NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI-----DDKIIERARQEHP   88 (461)
Q Consensus        17 ~f~p~~~~---~v~~Y~CGpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDi-----dDkii~~a~~~~~   88 (461)
T Consensus        23 ~f~~~~~~~~~~f~I~~PPPNVTG~LHmGHAl~~tl~D~l~RykRM~G~~--vl~~pG-~DhAGIaTq~~VEk~l~~~g~   99 (877)
T COG0525          23 YFKPDPNEDKPPFSIDTPPPNVTGSLHMGHALNYTLQDILARYKRMRGYN--VLWPPG-TDHAGIATQVVVEKQLAAEGI   99 (877)
T ss_pred             CCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE--EECCCC-CCCCCCHHHHHHHHHHHHCCC
T ss_conf             85678877789727968979988865116545378999999998707973--335798-777883089999999987098


Q ss_pred             CCCC-C-----CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH---HHHHHHHHHHHHHHHCCCCCCCCCCEEECCH--
Q ss_conf             8644-8-----848999999999999987762685410001235---6777789999987411432012892875220--
Q gi|254780573|r   89 SIPI-N-----DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNEIIFDTS--  157 (461)
Q Consensus        89 ~~~~-~-----~~~~~~a~~~~~~f~~d~~~L~v~~p~~~pr~t---~~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~--  157 (461)
T Consensus       100 ~r~d~gRe~Fl~~~weWk~e~~~~I~~Q~~rLG~S~DWsrE~fTmD~~~s~av~~~Fv~Ly~~GlIYr~~~lVNWcP~~~  179 (877)
T COG0525         100 TRHDLGREEFLKKCWEWKEESGGTIREQLRRLGVSVDWSRERFTMDPGLSRAVQEAFVRLYEKGLIYRGERLVNWCPKCR  179 (877)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
T ss_conf             80105899999999999999989999999984787355531126798899999999999997894651487434788633


Q ss_pred             ---------------------------------------------------HCCCCCCCCCCCHHHHHHHHHCC---C--
Q ss_conf             ---------------------------------------------------02454322467546666432102---2--
Q gi|254780573|r  158 ---------------------------------------------------SIPNYGSFSRRKIDEQKMGTRVP---E--  181 (461)
Q Consensus       158 ---------------------------------------------------~~~~YG~Ls~~~~~~~~~g~r~~---~--  181 (461)
T Consensus       180 TAiSd~EVe~~e~~g~L~~i~y~l~~~~~~i~VATTRPEtmlgdtAVaVhP~DeRYk~LvGk~v~lPl~~r~IpIiaD~~  259 (877)
T COG0525         180 TAISDIEVEYKEVEGKLYYIKYPLADGDGYLVVATTRPETLLGDTAVAVHPDDERYKHLVGKEVILPLVGREIPIIADEY  259 (877)
T ss_pred             CCHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHCCCEEECCCCCCEEEEECCCC
T ss_conf             40204450001100368999975389986389981686301026699989987666863588896468897533534733


Q ss_pred             -CC----------CCCCCCCEEEEEC------------------------------------------------------
Q ss_conf             -22----------1012351266633------------------------------------------------------
Q gi|254780573|r  182 -KY----------HKKNPADFILWKR------------------------------------------------------  196 (461)
Q Consensus       182 -~~----------~K~~p~DFaLWK~------------------------------------------------------  196 (461)
T Consensus       260 VD~eFGTG~VkItpahD~nD~e~~krh~Lp~i~i~d~dG~in~~~~~~~~Gl~r~eAR~kIv~~L~~~GlLvk~e~~~h~  339 (877)
T COG0525         260 VDPEFGTGAVKITPAHDFNDYEVGKRHNLPLINIIDEDGRINEEAAGEFAGLDRFEARKKIVEDLEEQGLLVKIEPHKHS  339 (877)
T ss_pred             CCCCCCCCEEEECCCCCCCHHHHHHCCCCCCEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             47767874189716999406545301798720688899705467764458986999999999999968996766444541


Q ss_pred             ---------------------------------CCCCCCEE-----------------------ECCCCCCCCCCCC-HH
Q ss_conf             ---------------------------------77666314-----------------------1467766764332-04
Q gi|254780573|r  197 ---------------------------------STPMEPGW-----------------------ESPWGRGRPGWHI-EC  219 (461)
Q Consensus       197 ---------------------------------~~~~e~~w-----------------------~spwG~GRPGWHi-EC  219 (461)
T Consensus       340 V~~~~R~g~~IEp~ls~QWfVk~~~la~~~l~~~~~g~i~f~P~~~~~~~~~W~~~i~DWcISRQlwwGh~IPvWy~~~~  419 (877)
T COG0525         340 VGHCERCGTPIEPLLSKQWFVKVLELAKKALEAVKDGKIKFVPERMEKRYEDWMENIRDWCISRQLWWGHRIPVWYCKEC  419 (877)
T ss_pred             CCCCCCCCCEEEEEECCEEEEEHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCC
T ss_conf             76116779602012324214870752699999874598468168899889999863837642221131763515996699


Q ss_pred             HHHHHH----------------HC---------------------C---------C--CEEEEEECCCCCCCCCHHHHHH
Q ss_conf             777787----------------52---------------------9---------8--4148741356666875136688
Q gi|254780573|r  220 SAMSSH----------------YL---------------------G---------K--VFDIHGGGLDLIFPHHENEIAQ  251 (461)
Q Consensus       220 sam~~~----------------~l---------------------g---------~--~~DIH~GG~DL~FPHHENEiAQ  251 (461)
T Consensus       420 g~v~v~~~~~~~~~~~~~~~~~~~~qd~DVLDTWFSS~LwPfstlgWp~~t~~l~~fyPt~llvtG~DIIffWvarmi~~  499 (877)
T COG0525         420 GNVVVAEEEPEDPAAAEKCPKEELEQDEDVLDTWFSSSLWPFSTLGWPEETPDLKKFYPTDLLVTGHDIIFFWVARMIMR  499 (877)
T ss_pred             CCEEECCCCCCCHHHHCCCCHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCEECCCCHHHHHHHHHHHHH
T ss_conf             83896786543535424682202057852323324115646400689874447773588730035531338999999999


Q ss_pred             HHHHCCCCCCHHHEECCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCHHHHHHH
Q ss_conf             886408753012100343257642022332332140899850253345577799999998425-6643211450346877
Q gi|254780573|r  252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEA  330 (461)
Q Consensus       252 s~a~~~~~~~a~yWlH~G~l~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lLss-hYRspLdfS~e~L~~A  330 (461)
T Consensus       500 ~~~~~~~~PFk~V~ihGLVrDe~G~KMSKS~GNvIDP~d~I~-------~yGaDAlRf~la~~~~~G~Di~~~~~~~~~~  572 (877)
T COG0525         500 GLHLTGEVPFKDVYIHGLVRDEQGRKMSKSKGNVIDPLDVID-------KYGADALRFTLASLASPGRDINFDEKRVEGY  572 (877)
T ss_pred             HHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHH-------HHCHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf             998658999627898116786888887555788589799998-------8485899999995368886657688998889


Q ss_pred             HHHHHHCCCC
Q ss_conf             7643210000
Q gi|254780573|r  331 EILLSKWPQT  340 (461)
Q Consensus       331 ~~~l~kl~~~  340 (461)
T Consensus       573 rnF~nKlWNa  582 (877)
T COG0525         573 RNFLNKLWNA  582 (877)
T ss_pred             HHHHHHHHHH
T ss_conf             9999998749