HHsearch alignment for GI: 254780573 and conserved domain: PRK04156

>PRK04156 gltX glutamyl-tRNA synthetase; Provisional.
Probab=99.24  E-value=1.3e-09  Score=89.13  Aligned_cols=273  Identities=18%  Similarity=0.223  Sum_probs=167.6

Q ss_pred             EEEEC---CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             23304---798479996167888844411127999999999999970799845799605523388899998708986448
Q gi|254780573|r   17 EFQAI---DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIN   93 (461)
Q Consensus        17 ~f~p~---~~~~v~~Y~CGpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~   93 (461)
T Consensus        89 ~lp~l~~~~~gkV~tRF-aP~P~G~LHiGhar~al~N~~~Ak~---~~G----~~iLR~eDTdp~~-~r-----------  148 (566)
T PRK04156         89 ELPPLLPNVKGKVVMRF-APNPSGPLHLGHARAAILNDEYAKR---YGG----KFILRFEDTDPRT-KR-----------  148 (566)
T ss_pred             CCCCCCCCCCCEEEEEE-CCCCCCCCCHHHHHHHHHHHHHHHH---CCC----EEEEEECCCCCCC-CC-----------
T ss_conf             79898866688389952-8699987618999999996999998---099----8999965888332-55-----------


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHCCCCCCCC---CCCH
Q ss_conf             8489999999999999877626854100012356777789999987411432012892875220024543224---6754
Q gi|254780573|r   94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS---RRKI  170 (461)
Q Consensus        94 ~~~~~~a~~~~~~f~~d~~~L~v~~p~~~pr~t~~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~~~~~YG~Ls---~~~~  170 (461)
T Consensus       149 -----~~~e~~~~I~~dl~WLG~~~-de~~~qSdr~~~y~~~a~~Li~~G~AY~c~c~~e-e~~~~r~~~~~~p~R~~~~  221 (566)
T PRK04156        149 -----PDPEAYDMIREDLKWLGVKP-DEVVIQSDRLEIYYEYARKLIEMGGAYVCTCDPE-EFKELKDKGEACPHRDQSP  221 (566)
T ss_pred             -----CCHHHHHHHHHHHHHHCCCC-CCCEEHHHHHHHHHHHHHHHHHCCCEEECCCCHH-HHHHHHHCCCCCCCCCCCH
T ss_conf             -----63789999999999829997-8016657619999999999998799277789999-9999986587687668997


Q ss_pred             -------HHHHHHH--------HCCCCCCCC--CCCCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf             -------6666432--------102222101--23512666337766631414677667643320477778752984148
Q gi|254780573|r  171 -------DEQKMGT--------RVPEKYHKK--NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI  233 (461)
Q Consensus       171 -------~~~~~g~--------r~~~~~~K~--~p~DFaLWK~~~~~e~~w~spwG~GRPGWHiECsam~~~~lg~~~DI  233 (461)
T Consensus       222 e~nl~~~~~m~~g~~~~g~~vlR~K~d~~~~n~~~rD~v~~Ri~~~~H~r~g~k~-~v~PtYdfa~~-idD~l~gITHvi  299 (566)
T PRK04156        222 EENLELWEKMLDGEYKEGEAVVRIKTDLNHPNPAVRDWVAFRIIDTPHPRTGDKY-RVWPLMNFAVA-VDDHLLGVTHVL  299 (566)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCCEEEE-EEHHHCCCCCEE
T ss_conf             8888899876514566787699997226789863223556785167776357754-44644240024-511104787156


Q ss_pred             EEECCCCCCCCCHHHHHH---HHHHCCCCCCHHHEECCCEEEEEECCCCCCCCCCCCHHHHHCCCC--------------
Q ss_conf             741356666875136688---886408753012100343257642022332332140899850253--------------
Q gi|254780573|r  234 HGGGLDLIFPHHENEIAQ---SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK--------------  296 (461)
Q Consensus       234 H~GG~DL~FPHHENEiAQ---s~a~~~~~~~a~yWlH~G~l~i~geKMSKSlGN~iti~dlL~~~~--------------  296 (461)
T Consensus       300 --Rg~e~----~~~t~~q~~ly~~lg~~~P---~~~~fgRln~~~~vlSKr-----kl~~lVe~g~v~GWDDPRlpTl~g  365 (566)
T PRK04156        300 --RGKDH----IVNTEKQRYIYKYFGWEYP---EYIHYGRLKIEGFVLSTS-----KIRKGIESGEYSGWDDPRLPTLRA  365 (566)
T ss_pred             --ECCCC----CCCHHHHHHHHHHCCCCCC---EEEEEEEEECCCEEEEHH-----HHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf             --44301----1344778999997298775---057776775153131088-----999998629888887884277899


Q ss_pred             CCCCCCCHHHHHHHHHCCCCC-CCCCCCHHHHHHHHH
Q ss_conf             345577799999998425664-321145034687776
Q gi|254780573|r  297 FGGRSWPAPVIRLAMLMTHYR-EPIDFTVQRLTEAEI  332 (461)
Q Consensus       297 ~~~k~y~p~viR~~lLsshYR-spLdfS~e~L~~A~~  332 (461)
T Consensus       366 lrRRG~~peAir~f~~~iGvsk~d~~i~~~~L~a~nR  402 (566)
T PRK04156        366 LRRRGILPEAIRELIIEVGLKETDATISWENLYALNR  402 (566)
T ss_pred             HHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf             9867999999999999968554453225999999999