HHsearch alignment for GI: 254780573 and conserved domain: PRK08560
>PRK08560 tyrosyl-tRNA synthetase; Validated.
Probab=97.52 E-value=0.00023 Score=51.60 Aligned_cols=204 Identities=19% Similarity=0.181 Sum_probs=99.2
Q ss_pred EEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 479996-1678888444111279999999999999707998457996055233888999987089864488489999999
Q gi|254780573|r 25 NIRMYV-CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103 (461)
Q Consensus 25 ~v~~Y~-CGpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~~~~~~~a~~~ 103 (461)
T Consensus 30 ~~rv~~G~~PT--G~lHLGh~v---~~~k~-~~lQd~g~~--~~~~--IaD~hA~i-~~----------~~~~~-~~r~~ 87 (333)
T PRK08560 30 EPKAYIGFEPS--GFIHLGHLV---TMNKL-ADLQKAGFK--VTVL--LADWHAWL-ND----------KGDLE-EIRKV 87 (333)
T ss_pred CCEEEECCCCC--CCCHHHHHH---HHHHH-HHHHHCCCC--EEEE--ECCCEEEC-CC----------CCCHH-HHHHH
T ss_conf 98899661789--845389999---99999-999977991--8999--61322333-89----------99999-99999
Q ss_pred HHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 999999877626854100-0123567777899999874114320128928752200245432246754666643210222
Q gi|254780573|r 104 TQQFVKDTTRLACLAPTH-QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182 (461)
Q Consensus 104 ~~~f~~d~~~L~v~~p~~-~pr~t~~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~~~~~YG~Ls~~~~~~~~~g~r~~~~ 182 (461)
T Consensus 88 ~~~~~~~~~A~GlDp~k~~i~~qS~-~~~~~e~~~-----------------~~~~l~~~~tl~r-----~~~~~~~~~~ 144 (333)
T PRK08560 88 AEYNKKVFEALGLDPDKTEFVLGSE-FQLDPEYWL-----------------LVLKLAKNTTLAR-----ARRSMTIMGR 144 (333)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCC-CCCCHHHHH-----------------HHHHHHCCCCHHH-----HHHHHHHHHH
T ss_conf 9999999997078964239998986-246756999-----------------9999806473999-----9887888755
Q ss_pred CCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHH--HHHHHHHHCCCCC
Q ss_conf 21012351266633776663141467766764332047777875298414874135666687513--6688886408753
Q gi|254780573|r 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN--EIAQSCCADRIEK 260 (461)
Q Consensus 183 ~~K~~p~DFaLWK~~~~~e~~w~spwG~GRPGWHiECsam~~~~lg~~~DIH~GG~DL~FPHHEN--EiAQs~a~~~~~~ 260 (461)
T Consensus 145 -~~~~~~~~--------g~~~--------YP------vlQaaDil~~~adi~~~G~DQ~~-~~~L~Rdia~rf~--~~~p 198 (333)
T PRK08560 145 -KMEEPIDV--------SKLV--------YP------LMQVADIFYLDVDIAVGGMDQRK-AHMLAREVLPKLG--YKKP 198 (333)
T ss_pred -CCCCCCCE--------EEEE--------CH------HHHHHHHHHCCCCCCCCCCCHHH-HHHHHHHHHHHCC--CCCC
T ss_conf -05899753--------1231--------42------77650687527995531543089-9999999999839--9997
Q ss_pred CHHHEECCCEE-EEEE-------CCCCCC-CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 01210034325-7642-------022332-332140899850253345577799999998425
Q gi|254780573|r 261 TANIWIHNGFL-NLEG-------RKMSKS-NGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314 (461)
Q Consensus 261 ~a~yWlH~G~l-~i~g-------eKMSKS-lGN~iti~dlL~~~~~~~k~y~p~viR~~lLss 314 (461)
T Consensus 199 ~~---l~~p~l~gl~g~~~~~~~~KMSkS~~~~~I~l~D------------~~~~i~kKI~~a 246 (333)
T PRK08560 199 VA---IHTPLLTGLDGGGEVLAEIKMSKSKPGSAIFVHD------------SPEEIRRKIKKA 246 (333)
T ss_pred EE---EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC------------CHHHHHHHHHHC
T ss_conf 57---5257545687877779988678899999474158------------999999999856