HHsearch alignment for GI: 254780573 and conserved domain: PRK12268
>PRK12268 methionyl-tRNA synthetase; Reviewed.
Probab=99.97 E-value=1.1e-29 Score=232.60 Aligned_cols=336 Identities=19% Similarity=0.173 Sum_probs=212.4
Q ss_pred EEEEEC--CCCCCCCCCCCCH-HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 999616--7888844411127-9999999999999707998457996055233888999987089864488489999999
Q gi|254780573|r 27 RMYVCG--PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103 (461)
Q Consensus 27 ~~Y~CG--pTvy~~~HiG~~r-~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~~~~~~~a~~~ 103 (461)
T Consensus 4 k~~iTt~~Py~nG~lHiGH~~~~~l~aDi~aRy~R~~G~~--v~~~~GtD~hG~~i~~~A~k~g~~------p~e~~~~~ 75 (558)
T PRK12268 4 RILITSAWPYANGPLHLGHLAGSYLPADVYARYQRLKGNE--VLFVSGSDEHGTPIELEAEKEGVS------PQELADKY 75 (558)
T ss_pred CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHHHCCCC------HHHHHHHH
T ss_conf 1898479988889855231114198999999999837998--797584064749999999985999------99999999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHH--HHHHHHHHHHHHHHCCCCCCCCCCEEECCHH--C----------------CCCC
Q ss_conf 999999877626854100012356--7777899999874114320128928752200--2----------------4543
Q gi|254780573|r 104 TQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTSS--I----------------PNYG 163 (461)
Q Consensus 104 ~~~f~~d~~~L~v~~p~~~pr~t~--~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~~--~----------------~~YG 163 (461)
T Consensus 76 ~~~~~~~~~~lgis-~D~f~rT~~~~~~~~v~~~f~~L~~~G~iy~~~~~~~yc~~~~~fl~d~~v~G~cP~c~~~~~~G 154 (558)
T PRK12268 76 HEEHKEDFEKLGIS-YDNYTRTTSPEHHELVQEFFLKLYENGYIEKKTIEQAYCPSDGRFLPDRYVEGTCPYCGYEKARG 154 (558)
T ss_pred HHHHHHHHHHCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
T ss_conf 99999999981983-77686689889999999999999988993301353436841123131233154067768743567
Q ss_pred CC---CCC--CHHHHH------HHHHCCCCCCCC------CCCCEEE--------EECC---------CCC----CCEEE
Q ss_conf 22---467--546666------432102222101------2351266--------6337---------766----63141
Q gi|254780573|r 164 SF---SRR--KIDEQK------MGTRVPEKYHKK------NPADFIL--------WKRS---------TPM----EPGWE 205 (461)
Q Consensus 164 ~L---s~~--~~~~~~------~g~r~~~~~~K~------~p~DFaL--------WK~~---------~~~----e~~w~ 205 (461)
T Consensus 155 d~ce~cg~~~~~~dli~p~~~~~g~~~e~~~~~~~f~~l~~~~~~l~~~~~~~~~~p~~~~~~~~~~l~~~l~D~~ISR~ 234 (558)
T PRK12268 155 DQCDNCGALLDPTDLINPRSKISGSTPEFRETEHFFLDLPAFQEALRKWIESGTDWPPNVLNFTLNWLKEGLKPRAITRD 234 (558)
T ss_pred CHHHHCCCCCCHHHHCCCCCCCCCCCCEEEECCCEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 32532476478577248856778994447734530214187789999998538877889999999998633756545553
Q ss_pred CCCCCCCCCC----------------CCHHHHHHHHHCCCC------------EEEEEECCCCCCCCCHHHHHHHHHHCC
Q ss_conf 4677667643----------------320477778752984------------148741356666875136688886408
Q gi|254780573|r 206 SPWGRGRPGW----------------HIECSAMSSHYLGKV------------FDIHGGGLDLIFPHHENEIAQSCCADR 257 (461)
Q Consensus 206 spwG~GRPGW----------------HiECsam~~~~lg~~------------~DIH~GG~DL~FPHHENEiAQs~a~~~ 257 (461)
T Consensus 235 ~~WGipiP~~~~~~~~iyVW~Da~~~yis~~~~~~~~~~~~~~~~~~W~~~~~~~~~f~GkDii~FH~v~wpa~l~a~~~ 314 (558)
T PRK12268 235 LPWGIPIPFEGAEGKVFYVWFDAPIGYISATKEWAKRKGDPEAWKEFWLDSDTKYYYFIGKDNIPFHSVIWPAMLLGSGE 314 (558)
T ss_pred CCCCEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 87865788555689679886578722034336545416985679872789984277643666543478799999973379
Q ss_pred CCCCHHHEECCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCHHHHHHHHH--HH
Q ss_conf 75301210034325764202233233214089985025334557779999999842-5664321145034687776--43
Q gi|254780573|r 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEI--LL 334 (461)
Q Consensus 258 ~~~~a~yWlH~G~l~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lLs-shYRspLdfS~e~L~~A~~--~l 334 (461)
T Consensus 315 ~~~lP~~i~~~g~~~~~G~KmSKS~Gnvi~p~~~i-------~~yg~D~lRy~L~~~~~~~~D~~fs~~~~~~~~N~dL~ 387 (558)
T PRK12268 315 PYKLPTAIVSSEYLTYEGQKFSKSRGWGIWVDDAL-------ERLPPDYLRYYLAANAPENSDTDFTWEEFIRRVNSELA 387 (558)
T ss_pred CCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHH-------HHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 87788778775568746841145578877989999-------87490777899885488888888799999999999999
Q ss_pred HHCCCC-------CC--------C---CCCCCHHHH----------HHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 210000-------13--------5---100596776----------30211012799999999999975130
Q gi|254780573|r 335 SKWPQT-------ST--------S---KGIIDPAVL----------SALYNDLNTVSAIQALHKLARESTKN 378 (461)
Q Consensus 335 ~kl~~~-------~~--------~---~~~~~~~f~----------~AL~DDLNTp~ALa~L~~lvk~~n~~ 378 (461)
T Consensus 388 ~~~gNl~~R~~~~~~k~~~g~~p~~~~~~~~d~~l~~~~~~~~~~v~~~~e~~~~~~Al~~i~~~~~~~N~y 459 (558)
T PRK12268 388 DKYGNLVNRVLSFIEKNFGGEVPEPGELGEEDEELLEKFQELFKEVGEHYEAIEFKKALEEIMELARLANKY 459 (558)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999865897898767985659999999999999999997517999999999999999999