HHsearch alignment for GI: 254780573 and conserved domain: PRK12282
>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed.
Probab=94.95 E-value=0.098 Score=32.76 Aligned_cols=209 Identities=16% Similarity=0.150 Sum_probs=99.6
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 96167888844411127999999999999970799845799605523388899998708986448848999999999999
Q gi|254780573|r 29 YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFV 108 (461)
Q Consensus 29 Y~CGpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~~~~~~~a~~~~~~f~ 108 (461)
T Consensus 5 ilSGiqPTG~~HLGnylGai~~~--v-~lQ~-~~~--~~~~--IaDl--HalT~---~------~~~~~~-l~~~~~~~a 64 (333)
T PRK12282 5 ILTGDRPTGKLHLGHYVGSLKNR--V-ALQN-EHK--QFVL--IADT--QALTD---N------AHNPEK-IRENILEVA 64 (333)
T ss_pred EEECCCCCCCCHHHHHHHHHHHH--H-HHHC-CCC--CEEE--EECH--HHHHC---C------CCCHHH-HHHHHHHHH
T ss_conf 88490878835488789999999--9-9971-688--0799--8447--88745---8------999999-999999999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 98776268541000123567777899999874114320128928752200245432246754666643210222210123
Q gi|254780573|r 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188 (461)
Q Consensus 109 ~d~~~L~v~~p~~~pr~t~~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~~~~~YG~Ls~~~~~~~~~g~r~~~~~~K~~p 188 (461)
T Consensus 65 a~~lA~GlDP~k~~if~QS~v~eh~eL~w~l~-----------------~~~~~~~l~r~~~~K~k~~-------~~--- 117 (333)
T PRK12282 65 LDYLAVGIDPAKSTIFVQSQIPALAELTMYYM-----------------NLVTVARLERNPTVKTEIA-------QK--- 117 (333)
T ss_pred HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH-----------------HCCCHHHHHHCCHHHHHHH-------CC---
T ss_conf 99997589856428997378668899999998-----------------3084889873435999986-------12---
Q ss_pred CCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHH--HHHHHHHH-CCCCCCH--H
Q ss_conf 51266633776663141467766764332047777875298414874135666687513--66888864-0875301--2
Q gi|254780573|r 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN--EIAQSCCA-DRIEKTA--N 263 (461)
Q Consensus 189 ~DFaLWK~~~~~e~~w~spwG~GRPGWHiECsam~~~~lg~~~DIH~GG~DL~FPHHEN--EiAQs~a~-~~~~~~a--~ 263 (461)
T Consensus 118 -~~~--~~i~~Gl~~YP--------------vLmAADILly~a~~VPVG~DQ~-qHlELtRdiA~rfN~~yg~~~f~~P~ 179 (333)
T PRK12282 118 -GFG--RSIPAGFLTYP--------------VSQAADITAFKATLVPVGDDQL-PMIEQTNEIVRRFNHTYGTDVLVEPE 179 (333)
T ss_pred -CCC--CCCCCCCCCCH--------------HHHHHHHHHCCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf -888--88763110376--------------9860204513788076665259-99999999999999870986568862
Q ss_pred -HEECCCE-EEEEEC-CCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf -1003432-576420-22332332140899850253345577799999998425
Q gi|254780573|r 264 -IWIHNGF-LNLEGR-KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314 (461)
Q Consensus 264 -yWlH~G~-l~i~ge-KMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lLss 314 (461)
T Consensus 180 ~~~~~~~ri~~Ldg~~KMSKS~~n~I~L~D------------~~~~I~kKI~ka 221 (333)
T PRK12282 180 ALLPEAGRLPGLDGKAKMSKSLGNAIYLSD------------SADTIKKKVMSM 221 (333)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEECCC------------CHHHHHHHHHHC
T ss_conf 304545667299985010599999621448------------999999998838