HHsearch alignment for GI: 254780573 and conserved domain: PRK12410
>PRK12410 glutamyl-tRNA synthetase; Provisional.
Probab=98.93 E-value=1.1e-07 Score=75.15 Aligned_cols=238 Identities=17% Similarity=0.209 Sum_probs=140.0
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 67888844411127999999999999970799845799605523388899998708986448848999999999999987
Q gi|254780573|r 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111 (461)
Q Consensus 32 GpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~~~~~~~a~~~~~~f~~d~ 111 (461)
T Consensus 5 APSPTG~lHiG~~rtAl~n~l~Ar~---~~G----~fiLRIEDtD~---~R----------------~~~~~~~~i~~~L 58 (433)
T PRK12410 5 APSPTGDMHIGNLRAAIFNYIVAKQ---QNE----DFIIRIEDTDK---ER----------------NIEGKDKEILEIL 58 (433)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHH---CCC----EEEEEECCCCC---CC----------------CCHHHHHHHHHHH
T ss_conf 9797996427899999999999985---599----89998787899---98----------------9869999999999
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCH--------------HCCCC-CCCCCCCHHHHHH-
Q ss_conf 7626854100012356777789999987411432012892875220--------------02454-3224675466664-
Q gi|254780573|r 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTS--------------SIPNY-GSFSRRKIDEQKM- 175 (461)
Q Consensus 112 ~~L~v~~p~~~pr~t~~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~--------------~~~~Y-G~Ls~~~~~~~~~- 175 (461)
T Consensus 59 ~wlGl~wD-e~~~QS~R~~~Y~~~~~~L~~~g~aY~C-----~ct~eel~~~r~~~~~~~~~~~Y~~~c~~l~~~e~~~~ 132 (433)
T PRK12410 59 NLFGISWD-KLVYQSENLKFHRQMAEKLLSEKKAFAC-----FCSEEELEAKKEKAKKQKKPYRYDGTCENLADIEVLKC 132 (433)
T ss_pred HHCCCCCC-CCEECCCCHHHHHHHHHHHHHCCCEEEE-----CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHC
T ss_conf 98599999-8831257899999999999980996896-----56789999988889855999778875443898679746
Q ss_pred HHHCCCCCCCCCCCCEEEEECCCCCCCEEEC-C-------CCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHH
Q ss_conf 3210222210123512666337766631414-6-------7766764332047777875298414874135666687513
Q gi|254780573|r 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWES-P-------WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247 (461)
Q Consensus 176 g~r~~~~~~K~~p~DFaLWK~~~~~e~~w~s-p-------wG~GRPGWHiECsam~~~~lg~~~DIH~GG~DL~FPHHEN 247 (461)
T Consensus 133 ~~~~~~R--~k~p~~~~~~~D~v~G~i~~~~~~~~D~Vi~R~DG~ptY~l-a~VVDD~~m~--IThViRGeD----hl~n 203 (433)
T PRK12410 133 EKPFVVR--LKKPNHTMSFTDAIKGELSFEPDEIDSFVILRQDKTPTYNF-ACAVDDMLYD--ISFIIRGED----HVSN 203 (433)
T ss_pred CCCCEEE--EECCCCCEEEEECCCCEECCCCCCCCCEEEEECCCCEEEEE-EEEECCCCCC--CCEEECCHH----HHHH
T ss_conf 9982799--98799985886344753415811058748993489835642-2796488787--400264285----9999
Q ss_pred HHHH---HHHHCCCCCCHHHEECCCEE-EEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 6688---88640875301210034325-764202233233214089985025334557779999999842566432
Q gi|254780573|r 248 EIAQ---SCCADRIEKTANIWIHNGFL-NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319 (461)
Q Consensus 248 EiAQ---s~a~~~~~~~a~yWlH~G~l-~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lLsshYRsp 319 (461)
T Consensus 204 T~kQi~l~~aLg~~~P-~-~~~H~pli~~~~g~kLSKR~g~-~~i~~yre------~GylPeAl~NyLalLG~~~~ 270 (433)
T PRK12410 204 TPKQILIREALGYNKP-I-TYAHLPIILNEEGKKMSKRDNA-SSVKWLLE------QGFLPEAIANYLILLGNKTP 270 (433)
T ss_pred HHHHHHHHHHCCCCCC-C-EEECCCCEECCCCCCCCCCCCC-CCHHHHHH------CCCCHHHHHHHHHHHCCCCC
T ss_conf 9999999998699998-5-2532010018999855666898-38888976------79875999999998289997