HHsearch alignment for GI: 254780573 and conserved domain: PRK12451
>PRK12451 arginyl-tRNA synthetase; Reviewed.
Probab=99.64 E-value=9.5e-13 Score=111.47 Aligned_cols=262 Identities=15% Similarity=0.117 Sum_probs=157.7
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH---H------------------
Q ss_conf 7984799961678888444111279999999999999707998457996055233888---9------------------
Q gi|254780573|r 22 DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI---I------------------ 80 (461)
Q Consensus 22 ~~~~v~~Y~CGpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDki---i------------------ 80 (461)
T Consensus 111 ~~k~v~vEfvSaNPtgpLHVGH~R~aiiGdsLariL~~~G~~--V~reyYinD~G~Qi~~l~~~~~~~~~~~~~~~~~~~ 188 (562)
T PRK12451 111 CEKTVVIDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYE--VVGINYIGDWGTQFGKLITAYKKWGNEAVVKEDPIR 188 (562)
T ss_pred CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE--EEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 998799985289999886242246279999999999986985--999997477308999999999985440112467578
Q ss_pred ------HHHHHC-------------------CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf ------999870-------------------8986448848999999999999987762685410001235677778999
Q gi|254780573|r 81 ------ERARQE-------------------HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135 (461)
Q Consensus 81 ------~~a~~~-------------------~~~~~~~~~~~~~a~~~~~~f~~d~~~L~v~~p~~~pr~t~~i~~~i~~ 135 (461)
T Consensus 189 ~l~~~y~~~~~~~~~~~~~~~~~~~~~~~le~~d~~~~~~~~~~~~~~l~~~~~~l~~l~v~fD~~~-~Es~~~~~~~~~ 267 (562)
T PRK12451 189 ELFKLYVQFHEEVKDDEELEEEGRAWFKKLEEGDEEAVELWNWFRHESLKEFSRIYELLGVEFTNFQ-GEAFYNNLMEDF 267 (562)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE-CHHHHHHHHHHH
T ss_conf 9999999999865048006899999999876689999999999999999999999999297201452-324451247899
Q ss_pred HHHHHHCCCCCCCCCCEEECCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCC
Q ss_conf 99874114320128928752200245432246754666643210222210123512666337766631414677667643
Q gi|254780573|r 136 IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGW 215 (461)
Q Consensus 136 i~~L~~~g~aY~~~g~VyFdv~~~~~YG~Ls~~~~~~~~~g~r~~~~~~K~~p~DFaLWK~~~~~e~~w~spwG~GRPGW 215 (461)
T Consensus 268 i~~L~~~g~~~e~dGA~~~~~~~~---g~------------------------~~~vl~k--sDGt~tY~t~-------- 310 (562)
T PRK12451 268 IGILEEHDLLEESEGALVVNLEEE---GM------------------------PPCLIRK--SDGATIYATR-------- 310 (562)
T ss_pred HHHHHHCCCEEECCCCEECCCCHH---CC------------------------CCEEEEC--CCCCCEEECC--------
T ss_conf 999997797894799743587131---27------------------------8638991--8997213166--------
Q ss_pred CCHHHHHH--HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHEECC--CEEEEEECCCCCCCCCCCCHHHH
Q ss_conf 32047777--875298414874135666687513668888640875301210034--32576420223323321408998
Q gi|254780573|r 216 HIECSAMS--SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN--GFLNLEGRKMSKSNGNFITINEL 291 (461)
Q Consensus 216 HiECsam~--~~~lg~~~DIH~GG~DL~FPHHENEiAQs~a~~~~~~~a~yWlH~--G~l~i~geKMSKSlGN~iti~dl 291 (461)
T Consensus 311 --DiA~~~~k~~~~~~d~~I~V~gadh~~-~~~rv~a~l~~l-g~-~~~~~~~hv~~~~v~~~g~kMStR~G~~v~l~dl 385 (562)
T PRK12451 311 --DLTAALYRQNTFGFDKALYVVGPEQSL-HFNQFFTVLKKL-GY-TWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEV 385 (562)
T ss_pred --HHHHHHHHHHHCCCCEEEEEECCCHHH-HHHHHHHHHHHC-CC-CCCCCEEEEEEEEEECCCCCEEECCCCEEEHHHH
T ss_conf --478999998730997589995674767-999999999974-99-7545506898899874886302057875689999
Q ss_pred HCCCCCC------------------CCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 5025334------------------557779999999842566432114503468
Q gi|254780573|r 292 LETKKFG------------------GRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328 (461)
Q Consensus 292 L~~~~~~------------------~k~y~p~viR~~lLsshYRspLdfS~e~L~ 328 (461)
T Consensus 386 l~e~~~~a~~~~~~r~~~~~~~~~ia~~VG~~Airy~~L~~~~~~~~~FD~d~~~ 440 (562)
T PRK12451 386 LEEAIELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLENML 440 (562)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf 9999999999987527771328999998531130134443167877767899997