HHsearch alignment for GI: 254780573 and conserved domain: PRK13354
>PRK13354 tyrosyl-tRNA synthetase; Provisional.
Probab=97.44 E-value=0.0043 Score=42.47 Aligned_cols=193 Identities=18% Similarity=0.150 Sum_probs=90.4
Q ss_pred CEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCC-CCHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 847999616788-884441112799999999999997079984579960552-338889999870898644884899999
Q gi|254780573|r 24 SNIRMYVCGPTV-YDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-IDDKIIERARQEHPSIPINDAISIITS 101 (461)
Q Consensus 24 ~~v~~Y~CGpTv-y~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTD-idDkii~~a~~~~~~~~~~~~~~~~a~ 101 (461)
T Consensus 36 ~~l~vy-~GfDPTa~sLHlGhlv~l~~---L~~fq-~~Gh~~-i~liGg~T~~IGDPSgk~~~R~~-------------- 95 (405)
T PRK13354 36 KPLTLK-LGLDPTAPDIHIGHLVVLRK---LKQFQ-DAGHRA-VILIGDFTGKIGDPTGKSKERKL-------------- 95 (405)
T ss_pred CCEEEE-EEECCCCCCCHHHHHHHHHH---HHHHH-HCCCCE-EEEECCCCCCCCCCCCCCCCCCC--------------
T ss_conf 843899-95469988520764999999---99999-869947-99967865425699998545667--------------
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC---HHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9999999987762685410001235677778999998741143201289287522---0024543224675466664321
Q gi|254780573|r 102 KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRKIDEQKMGTR 178 (461)
Q Consensus 102 ~~~~~f~~d~~~L~v~~p~~~pr~t~~i~~~i~~i~~L~~~g~aY~~~g~VyFdv---~~~~~YG~Ls~~~~~~~~~g~r 178 (461)
T Consensus 96 ------------------l~~e~i~~N~~~~~~q~~~~ld~~~~~iv~N~~W~~~~~~~dfl~~g~~--~~v~~mL~rd~ 155 (405)
T PRK13354 96 ------------------LTDEQVQHNADTYTEQIFKLLDKEKTEMVNNSDWLSKLNFIDVIDLGKK--FTVARMLERDD 155 (405)
T ss_pred ------------------CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCHHHHHHHHHH--CCHHHHHHHHH
T ss_conf ------------------6799999999999999998636655178656876647445689998612--72999884789
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHH-----HCCCCEEEEEECCCCCCCCCHHHHHH--
Q ss_conf 02222101235126663377666314146776676433204777787-----52984148741356666875136688--
Q gi|254780573|r 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQ-- 251 (461)
Q Consensus 179 ~~~~~~K~~p~DFaLWK~~~~~e~~w~spwG~GRPGWHiECsam~~~-----~lg~~~DIH~GG~DL~FPHHENEiAQ-- 251 (461)
T Consensus 156 v~~Rl~~~~~is~-------------------------~EF~Y~llQayD~~~L--~~~iqiGGsDQ~g----Ni~~G~d 204 (405)
T PRK13354 156 FKKRLESDQGISF-------------------------HEFFYPLLQAYDSVHL--DADIELGGTDQWF----NILMGRD 204 (405)
T ss_pred HHHHHHCCCCCEE-------------------------EEHHHHHHHHHHHHHH--CCCEEEECHHHHH----HHHHHHH
T ss_conf 9999847999368-------------------------5146788888649986--8837995086888----9997999
Q ss_pred -HHHHCCCCCCHHHEECCCE-EEEEE-CCCCCCCCCCCCHHH
Q ss_conf -8864087530121003432-57642-022332332140899
Q gi|254780573|r 252 -SCCADRIEKTANIWIHNGF-LNLEG-RKMSKSNGNFITINE 290 (461)
Q Consensus 252 -s~a~~~~~~~a~yWlH~G~-l~i~g-eKMSKSlGN~iti~d 290 (461)
T Consensus 205 L~r~~~~~~~---~~lT~PLL~~~dG~~KmgKS~gnaIwLd~ 243 (405)
T PRK13354 205 LQRKLGEEKQ---VGITMPLLEGLDGTEKMSKSLGNYIGLDE 243 (405)
T ss_pred HHHHHCCCCC---EEEEECCEECCCCCCCCCCCCCCCEECCC
T ss_conf 9998578983---59960615788775532501278631479