HHsearch alignment for GI: 254780573 and conserved domain: pfam00750
>pfam00750 tRNA-synt_1d tRNA synthetases class I (R). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only arginyl tRNA synthetase.
Probab=99.56 E-value=1.6e-12 Score=109.95 Aligned_cols=273 Identities=16% Similarity=0.155 Sum_probs=164.5
Q ss_pred EEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC-----------
Q ss_conf 898889826223304798479996167888844411127999999999999970799845799605523-----------
Q gi|254780573|r 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI----------- 75 (461)
Q Consensus 7 lyntlt~~~~~f~p~~~~~v~~Y~CGpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDi----------- 75 (461)
T Consensus 2 ~~~~~~~~~~g~~~~k~kkI~vE~~S~Np~kplHvGHlR~aiiGdslarll~~~G~~--V~r~~yvnD~G~Qi~~l~~~~ 79 (345)
T pfam00750 2 VTKILAQGGLGSALLENKKVVVEFSSPNPAKPIHVGHLRSTIIGDALSRLLEFLGYD--VVRENYVGDWGTQFGMLIASL 79 (345)
T ss_pred HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE--EEEEEEECCHHHHHHHHHHHH
T ss_conf 677732766798778998899985389999885041015279999999999987995--989987686489999999999
Q ss_pred -----------------------------CHHHHHHHHHCCCCCC-C-CCCHHHHHH-HHHHHHHHHHHHHCCCCCCHHH
Q ss_conf -----------------------------3888999987089864-4-884899999-9999999987762685410001
Q gi|254780573|r 76 -----------------------------DDKIIERARQEHPSIP-I-NDAISIITS-KNTQQFVKDTTRLACLAPTHQP 123 (461)
Q Consensus 76 -----------------------------dDkii~~a~~~~~~~~-~-~~~~~~~a~-~~~~~f~~d~~~L~v~~p~~~p 123 (461)
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~Y~~~~~~~~~~~~~~~~~~~~~~~le~~d~~~~~~~~~~~~~~~~~~l~~l~v~fD~-~~ 158 (345)
T pfam00750 80 EAAAKEELTVPMPIQDLEDGYRGIKKDYIAEEIFAKEARNAVVLLQSGDEEFREMWVLLIFDHIKQSLNKIYDDFDV-TL 158 (345)
T ss_pred HHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCC-CC
T ss_conf 98566654556650566664215668888689999858998745001479999999999999999999996405376-71
Q ss_pred HHHH--HHHHHHHHHHHHHHCCCCCCCCCCEEECCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 2356--77778999998741143201289287522002454322467546666432102222101235126663377666
Q gi|254780573|r 124 RATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201 (461)
Q Consensus 124 r~t~--~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~~~~~YG~Ls~~~~~~~~~g~r~~~~~~K~~p~DFaLWK~~~~~e 201 (461)
T Consensus 159 ~Ese~~~~~~v~~vl~~L~~~g~~~e~dGA~~~~~~~~---gd-----------------------~~~~vl~r--sDGt 210 (345)
T pfam00750 159 HEGESVYKGRMNDAVKDLKDNGLVYENDGALWLFLTEF---GD-----------------------DKDRVVIK--SDGG 210 (345)
T ss_pred CHHHHHHCCHHHHHHHHHHHCCCEEEECCCEEEECCCC---CC-----------------------CCCCEEEE--CCCC
T ss_conf 06788844509999999987798897489879942434---78-----------------------77744781--5995
Q ss_pred CEEECCCCCCCCCCCCHHHHH-HHHH--CCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHEECCCE--EEE-EE
Q ss_conf 314146776676433204777-7875--29841487413566668751366888864087530121003432--576-42
Q gi|254780573|r 202 PGWESPWGRGRPGWHIECSAM-SSHY--LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF--LNL-EG 275 (461)
Q Consensus 202 ~~w~spwG~GRPGWHiECsam-~~~~--lg~~~DIH~GG~DL~FPHHENEiAQs~a~~~~~~~a~yWlH~G~--l~i-~g 275 (461)
T Consensus 211 ~~Y~t~-----------DiAy~~~K~~~~~~D~~I~V~g~dq~~-h~~~l~~~l~~lg~-~~~~~~~~h~~~g~v~~~dg 277 (345)
T pfam00750 211 ALYITT-----------DLAYAKERLEQRGFDLIIYVLGADQHG-HIQRLFAAAAALGY-DPESVEVLHIGFGVVLGKDG 277 (345)
T ss_pred EEECHH-----------HHHHHHHHHHCCCCCEEEEECCCCHHH-HHHHHHHHHHHCCC-CCCCCCEEEEEEEEEECCCC
T ss_conf 000246-----------899999998725998688864742756-99999999998599-94236178999973876899
Q ss_pred CCCCCCCCCCCCHHHHHCCCCCC-------------------CCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 02233233214089985025334-------------------5577799999998425664321145
Q gi|254780573|r 276 RKMSKSNGNFITINELLETKKFG-------------------GRSWPAPVIRLAMLMTHYREPIDFT 323 (461)
Q Consensus 276 eKMSKSlGN~iti~dlL~~~~~~-------------------~k~y~p~viR~~lLsshYRspLdfS 323 (461)
T Consensus 278 kkMStR~G~~v~l~dLl~ea~~~a~~~~~~~~~~~~~~~~~ia~~Vgi~Airy~~L~~~~~k~i~FD 344 (345)
T pfam00750 278 KRMSTRAGNVVTLDDLLDEALERAMDIKEKNRDLTADELEAVATAIGVDAARYADLSSNRDTDYIFD 344 (345)
T ss_pred CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 6167788775789999999999999999736689877899999877076765999865889898358