HHsearch alignment for GI: 254780573 and conserved domain: pfam09334
>pfam09334 tRNA-synt_1g tRNA synthetases class I (M). This family includes methionyl tRNA synthetases.
Probab=100.00 E-value=0 Score=368.27 Aligned_cols=293 Identities=21% Similarity=0.201 Sum_probs=220.3
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 67888844411127999999999999970799845799605523388899998708986448848999999999999987
Q gi|254780573|r 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111 (461)
Q Consensus 32 GpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~~~~~~~a~~~~~~f~~d~ 111 (461)
T Consensus 7 pP~~nG~lHiGHa~~~~~~Dvl~R~~r~~G~~--V~~v~g~D~~g~~i~~ka~~~g~~------~~e~~~~y~~~~~~~~ 78 (388)
T pfam09334 7 LPYVNGPPHIGHLYTTIPADVYARYLRLRGYD--VLFVTGTDEHGTKIELAAEKEGVT------PQELVDRYHEEFKELF 78 (388)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC--CEECCCCCCCHHHHHHHHHHCCCC------HHHHHHHHHHHHHHHH
T ss_conf 98888860022418899999999999956997--071386485379999999984999------9999999999999999
Q ss_pred HHHCCCCCCHHHHHHH--HHHHHHHHHHHHHHCCCCCCCCCCEEECCHHC------------CCCC---------CCCCC
Q ss_conf 7626854100012356--77778999998741143201289287522002------------4543---------22467
Q gi|254780573|r 112 TRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTSSI------------PNYG---------SFSRR 168 (461)
Q Consensus 112 ~~L~v~~p~~~pr~t~--~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~~~------------~~YG---------~Ls~~ 168 (461)
T Consensus 79 ~~lgi~~-D~~~~t~~~~~~~~v~~~f~~L~~~G~iy~~~~~~~y~~~~~~~l~d~~v~g~cp~~~~~~~~~~~~e~~G~ 157 (388)
T pfam09334 79 KKFNISF-DDFIRTTSERHKELVQEFFLKLYEKGDIYEGEYEGWYCVSDERFLPDRYVEGTCPYCGSEDARGDQCEVCGR 157 (388)
T ss_pred HHHCCCC-CCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCCC
T ss_conf 9839967-878657984689999999875140681553241122366666666533307545755750136641002388
Q ss_pred CHHHHHH--------HHHCCCCCCCC----------C-----CCCEEEEECC---------CCCC----CEEECCCCCCC
Q ss_conf 5466664--------32102222101----------2-----3512666337---------7666----31414677667
Q gi|254780573|r 169 KIDEQKM--------GTRVPEKYHKK----------N-----PADFILWKRS---------TPME----PGWESPWGRGR 212 (461)
Q Consensus 169 ~~~~~~~--------g~r~~~~~~K~----------~-----p~DFaLWK~~---------~~~e----~~w~spwG~GR 212 (461)
T Consensus 158 ~~e~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~wl~~~l~Dw~ISR~~~WG~~i 237 (388)
T pfam09334 158 PLEPTELINPRSAISGSTPELKEEEHYFFRLSKFQDKLLEWIKENPDEPPSNVNEVVLSWLKEGLKDLSITRDLDWGIPV 237 (388)
T ss_pred CCCHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 27867741764446799754432441233068899999999954998898899999999986688876441247787504
Q ss_pred CC--------C-------------CCHHHHHHHHHC---CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHEECC
Q ss_conf 64--------3-------------320477778752---98414874135666687513668888640875301210034
Q gi|254780573|r 213 PG--------W-------------HIECSAMSSHYL---GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268 (461)
Q Consensus 213 PG--------W-------------HiECsam~~~~l---g~~~DIH~GG~DL~FPHHENEiAQs~a~~~~~~~a~yWlH~ 268 (461)
T Consensus 238 P~~~~~~~~vW~da~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~G~Di~~fh~~~~~a~~~~~-~-~~~~~~~~~~ 315 (388)
T pfam09334 238 PGDPGKVIYVWFDALIGYISATKYLSGNPEKWKKFWADDPDTEIVHFIGKDIIRFHAIYWPAMLMAA-G-LPLPTQVFAH 315 (388)
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHC-C-CCCCCEEEEE
T ss_conf 8889806877235655520002777778178886443677620001067641420178999999838-9-9988667875
Q ss_pred CEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHH-CCCCCCCCCCCHHHHHHHHH--HHHHCCCCCC
Q ss_conf 32576420223323321408998502533455777999999984-25664321145034687776--4321000013
Q gi|254780573|r 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI--LLSKWPQTST 342 (461)
Q Consensus 269 G~l~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lL-sshYRspLdfS~e~L~~A~~--~l~kl~~~~~ 342 (461)
T Consensus 316 g~v~~~G~KMSKSlGN~i~~~d~i-------~~ygaDalR~~L~~~~~~~~d~~Fs~~~~~~~~n~~~~~kl~N~~~ 385 (388)
T pfam09334 316 GWLTVEGGKMSKSRGNVVDPDELL-------DRYGVDALRYYLAREAPEGKDGDFSWEDFVERVNSELANDLGNLVN 385 (388)
T ss_pred EEEEECCEECCCCCCCCCCHHHHH-------HHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 799759944478699878889999-------8878289999999539998999899999999987998887765773